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Experiment Chicken_E3_posterior_slice_1, section s10.

Sample reads: 124,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6099.50 49095.40
2. MT-ATP6 MT-ATP6 3758.31 30250.96
3. MT-CYB MT-CYB 1930.91 15542.06
4. RPLP1 ENSGALG00000030878 1385.55 11152.41 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. MT-ND5 MT-ND5 1325.31 10667.53
6. MT-ND4 MT-ND4 1180.68 9503.39
7. TMSB4X ENSGALG00000026383 1159.98 9336.78 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
8. MT-ND6 MT-ND6 1146.97 9232.06
9. MT-CO1 MT-CO1 1124.15 9048.38
10. EEF1A EEF1A 1049.05 8443.89
11. RPS10 ENSGALG00000002813 935.20 7527.51 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
12. RPS29 ENSGALG00000012229 887.17 7140.91 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
13. RPS3A ENSGALG00000010077 839.93 6760.67 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
14. gga-mir-3527 gga-mir-3527 830.91 6688.07
15. RPL35A ENSGALG00000007611, ENSGALG00000041230 721.57 5807.98 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
16. RPLP0 ENSGALG00000023294 705.91 5681.93 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
17. RPL15 ENSGALG00000011290 701.93 5649.89 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
18. RPS8 ENSGALG00000010124 700.07 5634.92 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
19. RPS12 ENSGALG00000013990 652.04 5248.33 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
20. ENSGALG00000018384 ENSGALG00000018384 629.48 5066.74
21. gga-mir-3533 ENSGALG00000027736 612.23 4927.89 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
22. MT-ND1 MT-ND1 573.22 4613.90
23. GAPDH ENSGALG00000014442 572.16 4605.36 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
24. RPL38 ENSGALG00000001465 569.51 4584.03 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
25. RPL27 ENSGALG00000002837 540.31 4349.00 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
26. RPL23 ENSGALG00000001634 522.27 4203.80 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
27. RPLP2 ENSGALG00000034811 518.02 4169.59 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
28. RPS21 ENSGALG00000005338 503.69 4054.24 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. RPL4 ENSGALG00000007711 501.04 4032.91 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
30. RPL23A ENSGALG00000003966 488.83 3934.63 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
31. RPL8 ENSGALG00000016232 475.03 3823.56 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
32. RPL19 ENSGALG00000001658 470.25 3785.08 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
33. RPS23 ENSGALG00000015617 460.43 3706.04 ribosomal protein S23
34. RPL6 ENSGALG00000004818 459.90 3701.77 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
35. RPL18A 420.63 3385.69 ribosomal protein L18a
36. RPL7A ENSGALG00000003197 416.91 3355.74 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
37. RPL36AL ENSGALG00000004952 415.32 3342.95 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
38. RPL14 ENSGALG00000043379 413.20 3325.88 ribosomal protein L14
39. RPS15A ENSGALG00000006771 409.75 3298.11 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. RPL26 RPL26 408.42 3287.41
41. RPL29 ENSGALG00000026978 402.05 3236.13 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
42. PPIA ENSGALG00000028600 401.25 3229.70 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
43. RPL27A ENSGALG00000005948 397.01 3195.57 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
44. RPL32 ENSGALG00000027142 392.23 3157.09 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
45. RPS4 RPS4 384.27 3093.02
46. ATP5G3 381.62 3071.69 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
47. RPL21 ENSGALG00000027035 378.43 3046.02 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
48. RPL13 ENSGALG00000006179 371.53 2990.48 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
49. CIRBP ENSGALG00000030918 370.74 2984.12 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
50. RPL35 ENSGALG00000035677 363.57 2926.41 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
51. ENSGALG00000028649 ENSGALG00000028649 360.12 2898.64
52. RPS14 ENSGALG00000004588 344.99 2776.85 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
53. MARCKSL1 ENSGALG00000032335 332.26 2674.39 MARCKS like 1 [Source:NCBI gene;Acc:770764]
54. HMGB2 ENSGALG00000010745 328.01 2640.18 high mobility group box 2 [Source:NCBI gene;Acc:396482]
55. RPS7 ENSGALG00000016392 327.74 2638.01 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
56. RPS15 ENSGALG00000015195 324.56 2612.41 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
57. RPS13 ENSGALG00000006096 316.60 2548.34 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
58. ANP32B ENSGALG00000037483 306.78 2469.30 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
59. NME2 ENSGALG00000002932 303.86 2445.80 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
60. RAN ENSGALG00000002569 302.53 2435.09 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
61. SNRPD1 ENSGALG00000041334 302.53 2435.09 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
62. ACTG1_1 ENSGALG00000001381 301.21 2424.47 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
63. HSPA8 ENSGALG00000006512 299.61 2411.59 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
64. RPSA 298.82 2405.23 ribosomal protein SA
65. RPL37 ENSGALG00000014833 298.55 2403.05 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
66. RPS16 ENSGALG00000026490 298.55 2403.05 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
67. MIF ENSGALG00000006326 296.96 2390.26 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
68. HMGN2 HMGN2 293.51 2362.49
69. RPL12 ENSGALG00000008806 292.71 2356.05 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
70. RPS28 ENSGALG00000024398 291.39 2345.42 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
71. ENO1 ENSGALG00000002377 288.47 2321.92 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
72. MT-ND3 MT-ND3 287.94 2317.65
73. RPS11 ENSGALG00000017299 283.69 2283.45 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
74. RPL31 ENSGALG00000016775 282.90 2277.09 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
75. RPL24 ENSGALG00000015339 274.93 2212.94 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
76. TCEB3 ENSGALG00000034625 274.93 2212.94 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
77. RPS20 ENSGALG00000014432 264.85 2131.80 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
78. RPS27A ENSGALG00000036790 262.46 2112.56 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
79. RPS2 ENSGALG00000005490 262.20 2110.47 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
80. TXN ENSGALG00000015704 261.40 2104.03 thioredoxin [Source:NCBI gene;Acc:396437]
81. STMN1 ENSGALG00000001475 249.46 2007.92 stathmin 1 [Source:NCBI gene;Acc:396057]
82. ITGB1BP3 ENSGALG00000030120 248.66 2001.49 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
83. SHFM1 SHFM1 246.01 1980.16
84. EIF3J ENSGALG00000008187 244.95 1971.62 eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
85. RPS24 ENSGALG00000004871 244.95 1971.62 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
86. HMGN5 ENSGALG00000007131 239.11 1924.62 high mobility group nucleosome binding domain 5, transcript variant X1
87. RPS25 ENSGALG00000007699 234.86 1890.41 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
88. PKM ENSGALG00000001992 234.33 1886.14 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
89. RPS6 ENSGALG00000015082 222.12 1787.86 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
90. RPL36 ENSGALG00000000474 210.71 1696.02 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
91. RPL5 ENSGALG00000005922 207.26 1668.25 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
92. H3-IX H3-IX 199.04 1602.09
93. LDHB ENSGALG00000035836 194.26 1563.62 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
94. ENSGALG00000002696 ENSGALG00000002696 192.67 1550.82
95. ENSGALG00000028992 ENSGALG00000028992 191.07 1537.94
96. EIF5A2 ENSGALG00000009309 186.03 1497.37 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
97. SET ENSGALG00000004701 184.70 1486.67 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
98. RPL9 ENSGALG00000000150 183.38 1476.04 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
99. RPS3 ENSGALG00000017330 183.11 1473.87 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
100. SNRPG ENSGALG00000028409 182.32 1467.51 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA