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Experiment Chicken_E3_embryo, section s83.

Sample reads: 113,536. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3894.39 34302.87
2. CIRBP ENSGALG00000030918 1200.97 10578.48 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
3. EEF1A EEF1A 1096.41 9657.48
4. RPL35A ENSGALG00000007611, ENSGALG00000041230 1063.70 9369.37 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
5. gga-mir-3533 ENSGALG00000027736 1061.95 9353.95 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. GAPDH ENSGALG00000014442 887.29 7815.50 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
7. MT-ATP6 MT-ATP6 835.31 7357.64
8. RPLP1 ENSGALG00000030878 827.71 7290.70 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
9. RPL15 ENSGALG00000011290 801.43 7059.22 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
10. MDK ENSGALG00000008367 738.92 6508.61 midkine [Source:NCBI gene;Acc:423196]
11. RPS10 ENSGALG00000002813 730.16 6431.45 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
12. RPL4 ENSGALG00000007711 726.66 6400.62 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. MT-ND5 MT-ND5 698.62 6153.64
14. RPLP0 ENSGALG00000023294 670.00 5901.55 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
15. RPL23A ENSGALG00000003966 647.80 5706.00 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
16. RPS23 ENSGALG00000015617 629.11 5541.38 ribosomal protein S23
17. RPL13 ENSGALG00000006179 602.82 5309.81 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
18. SNRPD1 ENSGALG00000041334 570.11 5021.69 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
19. RPL27A ENSGALG00000005948 535.65 4718.15 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
20. RPS8 ENSGALG00000010124 524.55 4620.38 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPS2 ENSGALG00000005490 489.50 4311.65 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
22. RPS12 ENSGALG00000013990 481.32 4239.60 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
23. RPL19 ENSGALG00000001658 479.57 4224.19 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
24. RPS3A ENSGALG00000010077 476.07 4193.36 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
25. RPL8 ENSGALG00000016232 460.88 4059.56 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
26. RPSA 451.53 3977.20 ribosomal protein SA
27. MT-ND4 MT-ND4 450.36 3966.90
28. PPIA ENSGALG00000028600 443.94 3910.35 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
29. RPL7A ENSGALG00000003197 442.77 3900.04 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
30. RPL12 ENSGALG00000008806 439.27 3869.21 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
31. RPS15A ENSGALG00000006771 432.84 3812.58 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. RPL35 ENSGALG00000035677 415.90 3663.36 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
33. RPL38 ENSGALG00000001465 414.15 3647.95 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
34. RPS6 ENSGALG00000015082 414.15 3647.95 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
35. MT-CYB MT-CYB 410.06 3611.92
36. RPS15 ENSGALG00000015195 410.06 3611.92 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
37. RPS21 ENSGALG00000005338 407.72 3591.31 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPL26 RPL26 404.22 3560.48
39. RPL27 ENSGALG00000002837 389.03 3426.68 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
40. HMGN5 ENSGALG00000007131 387.86 3416.38 high mobility group nucleosome binding domain 5, transcript variant X1
41. ANP32B ENSGALG00000037483 380.27 3349.52 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
42. RPL32 ENSGALG00000027142 377.35 3323.80 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
43. RPS16 ENSGALG00000026490 376.76 3318.61 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. gga-mir-3527 gga-mir-3527 376.18 3313.50
45. RPL37 ENSGALG00000014833 370.92 3267.17 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
46. MT-CO1 MT-CO1 363.91 3205.42
47. RPS28 ENSGALG00000024398 357.49 3148.87 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
48. RPS29 ENSGALG00000012229 351.65 3097.43 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
49. RPS27A ENSGALG00000036790 350.48 3087.13 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
50. RPL36 ENSGALG00000000474 348.73 3071.71 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
51. RPS4 RPS4 348.14 3066.51
52. RPL29 ENSGALG00000026978 343.47 3025.38 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
53. NME2 ENSGALG00000002932 325.36 2865.86 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
54. RPS11 ENSGALG00000017299 318.35 2804.12 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
55. RPL21 ENSGALG00000027035 317.18 2793.81 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
56. PHB2 ENSGALG00000014567 316.01 2783.50 prohibitin 2 [Source:NCBI gene;Acc:771124]
57. RPL6 ENSGALG00000004818 308.42 2716.65 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
58. TXN ENSGALG00000015704 303.16 2670.32 thioredoxin [Source:NCBI gene;Acc:396437]
59. GNB2L1 ENSGALG00000000122 300.83 2649.79 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
60. RPS14 ENSGALG00000004588 289.14 2546.83 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
61. RPS7 ENSGALG00000016392 287.39 2531.41 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPL23 ENSGALG00000001634 286.81 2526.30 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
63. RPL24 ENSGALG00000015339 284.47 2505.69 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
64. RPL37A ENSGALG00000011472 279.21 2459.36 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
65. EIF5A2 ENSGALG00000009309 278.63 2454.25 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
66. ENSGALG00000028649 ENSGALG00000028649 266.95 2351.37
67. ENO1 ENSGALG00000002377 262.27 2310.15 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
68. ENSGALG00000018384 ENSGALG00000018384 261.69 2305.04
69. ALDOC ENSGALG00000026077 257.60 2269.01 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
70. RPL36AL ENSGALG00000004952 256.43 2258.71 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
71. HMGN2 HMGN2 255.26 2248.40
72. TCEB3 ENSGALG00000034625 252.93 2227.88 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
73. RPL14 ENSGALG00000043379 249.42 2196.96 ribosomal protein L14
74. RPS13 ENSGALG00000006096 247.09 2176.44 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
75. EIF4G2 ENSGALG00000005587 243.00 2140.41 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
76. ENSGALG00000002696 ENSGALG00000002696 240.66 2119.80
77. TMSB4X ENSGALG00000026383 240.08 2114.69 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
78. RPL5 ENSGALG00000005922 236.57 2083.77 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
79. UBB ENSGALG00000004509 234.24 2063.25 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
80. RPS20 ENSGALG00000014432 233.65 2058.05 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
81. MT-ND3 MT-ND3 228.39 2011.72
82. RPL31 ENSGALG00000016775 228.39 2011.72 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
83. FKBP4 ENSGALG00000014331 227.23 2001.51 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
84. RPL18A 226.06 1991.20 ribosomal protein L18a
85. STMN1 ENSGALG00000001475 222.55 1960.28 stathmin 1 [Source:NCBI gene;Acc:396057]
86. SLC25A6_1 ENSGALG00000016691 220.80 1944.87 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
87. HNRNPDL ENSGALG00000023199 220.22 1939.76 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
88. CRHOA CRHOA 217.88 1919.15
89. ENSGALG00000028992 ENSGALG00000028992 216.13 1903.73
90. LDHB ENSGALG00000035836 212.62 1872.82 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. HSPA8 ENSGALG00000006512 207.95 1831.68 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
92. MT-ND1 MT-ND1 207.95 1831.68
93. ATP5G3 206.78 1821.38 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
94. PRDX1 ENSGALG00000010243 205.03 1805.96 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. RPL7 ENSGALG00000035252 203.28 1790.55 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
96. RPS17 ENSGALG00000002157 199.77 1759.63 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
97. MEIS2 ENSGALG00000039118 198.60 1749.32 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
98. HBG1 HBG1 196.85 1733.91
99. RPS25 ENSGALG00000007699 190.43 1677.36 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
100. NDUFB9 ENSGALG00000042242 189.26 1667.05 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA