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Experiment Chicken_E3_embryo, section s81.

Sample reads: 113,340. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4301.14 37951.77
2. EEF1A EEF1A 1201.23 10599.24
3. MT-ATP6 MT-ATP6 1149.02 10138.56
4. MT-ND5 MT-ND5 1062.36 9373.90
5. GAPDH ENSGALG00000014442 1024.25 9037.63 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
6. CIRBP ENSGALG00000030918 978.31 8632.27 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
7. gga-mir-3533 ENSGALG00000027736 961.09 8480.33 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. RPL15 ENSGALG00000011290 838.93 7402.43 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
9. RPLP0 ENSGALG00000023294 835.80 7374.81 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
10. RPL4 ENSGALG00000007711 811.78 7162.87 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
11. MDK ENSGALG00000008367 797.16 7033.86 midkine [Source:NCBI gene;Acc:423196]
12. RPLP1 ENSGALG00000030878 736.09 6495.00 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
13. RPL23A ENSGALG00000003966 718.34 6338.38 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
14. RPL35A ENSGALG00000007611, ENSGALG00000041230 683.88 6034.32 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
15. RPS10 ENSGALG00000002813 671.87 5928.35 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
16. RPS23 ENSGALG00000015617 576.34 5085.42 ribosomal protein S23
17. SNRPD1 ENSGALG00000041334 575.29 5076.16 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
18. RPL13 ENSGALG00000006179 513.69 4532.62 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. PPIA ENSGALG00000028600 508.47 4486.56 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
20. RPL27A ENSGALG00000005948 487.07 4297.74 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPSA 470.89 4154.97 ribosomal protein SA
22. RPS6 ENSGALG00000015082 466.19 4113.50 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
23. RPL19 ENSGALG00000001658 463.58 4090.47 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
24. RPS11 ENSGALG00000017299 463.06 4085.88 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
25. MT-CYB MT-CYB 455.22 4016.70
26. MT-ND4 MT-ND4 454.18 4007.53
27. RPS12 ENSGALG00000013990 450.53 3975.32 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
28. RPS8 ENSGALG00000010124 444.78 3924.58 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
29. RPL26 RPL26 443.22 3910.82
30. RPL35 ENSGALG00000035677 434.34 3832.47 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
31. RPS15A ENSGALG00000006771 432.25 3814.02 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. RPS2 ENSGALG00000005490 427.56 3772.64 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
33. RPL7A ENSGALG00000003197 422.34 3726.58 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. RPL29 ENSGALG00000026978 418.16 3689.70 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
35. GNB2L1 ENSGALG00000000122 408.76 3606.76 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
36. RPS21 ENSGALG00000005338 401.98 3546.93 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. RPL38 ENSGALG00000001465 397.28 3505.46 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
38. RPL8 ENSGALG00000016232 396.76 3500.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
39. RPL32 ENSGALG00000027142 392.58 3463.99 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
40. MT-CO1 MT-CO1 374.31 3302.78
41. RPS16 ENSGALG00000026490 374.31 3302.78 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
42. RPL27 ENSGALG00000002837 368.04 3247.46 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. HBG1 HBG1 365.43 3224.43
44. PHB2 ENSGALG00000014567 365.43 3224.43 prohibitin 2 [Source:NCBI gene;Acc:771124]
45. RPS27A ENSGALG00000036790 358.12 3159.93 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
46. RPS29 ENSGALG00000012229 356.04 3141.57 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
47. RPS3A ENSGALG00000010077 355.51 3136.90 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
48. RPS15 ENSGALG00000015195 354.47 3127.72 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
49. ENSGALG00000028649 ENSGALG00000028649 352.90 3113.87
50. RPL12 ENSGALG00000008806 350.82 3095.51 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
51. NME2 ENSGALG00000002932 340.90 3007.98 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
52. RPS4 RPS4 337.76 2980.28
53. HBZ ENSGALG00000023740 336.20 2966.51 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
54. HMGN5 ENSGALG00000007131 333.59 2943.48 high mobility group nucleosome binding domain 5, transcript variant X1
55. gga-mir-3527 gga-mir-3527 328.37 2897.42
56. RPL37 ENSGALG00000014833 326.80 2883.57 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
57. RPS28 ENSGALG00000024398 324.71 2865.13 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
58. RPL21 ENSGALG00000027035 318.97 2814.48 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
59. RPL36 ENSGALG00000000474 301.22 2657.86 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
60. TXN ENSGALG00000015704 301.22 2657.86 thioredoxin [Source:NCBI gene;Acc:396437]
61. ANP32B ENSGALG00000037483 297.57 2625.65 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
62. RPS14 ENSGALG00000004588 286.08 2524.27 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
63. ALDOC ENSGALG00000026077 271.46 2395.27 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
64. RPL14 ENSGALG00000043379 266.77 2353.89 ribosomal protein L14
65. RPL24 ENSGALG00000015339 263.63 2326.18 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
66. ENO1 ENSGALG00000002377 262.07 2312.42 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
67. STMN1 ENSGALG00000001475 261.55 2307.83 stathmin 1 [Source:NCBI gene;Acc:396057]
68. RPL36AL ENSGALG00000004952 261.02 2303.15 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
69. RPL6 ENSGALG00000004818 256.32 2261.68 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
70. RPS7 ENSGALG00000016392 255.28 2252.50 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
71. EEF1D 250.06 2206.44 eukaryotic translation elongation factor 1 delta, transcript variant X13
72. RPL5 ENSGALG00000005922 250.06 2206.44 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
73. EIF5A2 ENSGALG00000009309 246.93 2178.82 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
74. UBB ENSGALG00000004509 246.41 2174.24 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
75. MT-ND1 MT-ND1 241.71 2132.77
76. RPS13 ENSGALG00000006096 241.71 2132.77 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. HMGN2 HMGN2 241.19 2128.18
78. RPS20 ENSGALG00000014432 238.05 2100.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
79. RPL31 ENSGALG00000016775 237.53 2095.88 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
80. RPL37A ENSGALG00000011472 237.01 2091.29 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
81. ENSGALG00000002696 ENSGALG00000002696 233.35 2059.00
82. ENSGALG00000018384 ENSGALG00000018384 233.35 2059.00
83. RPL18A 229.70 2026.79 ribosomal protein L18a
84. CRHOA CRHOA 228.13 2012.94
85. SET ENSGALG00000004701 227.61 2008.35 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
86. RPL23 ENSGALG00000001634 226.57 1999.18 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
87. ATP5G3 221.35 1953.12 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
88. LDHB ENSGALG00000035836 218.22 1925.50 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
89. HNRNPDL ENSGALG00000023199 216.13 1907.06 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
90. PRDX1 ENSGALG00000010243 213.52 1884.03 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
91. RPS25 ENSGALG00000007699 211.43 1865.59 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
92. SLC25A6_1 ENSGALG00000016691 208.30 1837.97 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
93. MT-ND3 MT-ND3 200.47 1768.88
94. ENSGALG00000028992 ENSGALG00000028992 197.33 1741.17
95. RPL7 ENSGALG00000035252 194.72 1718.14 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
96. TCEB3 ENSGALG00000034625 192.64 1699.79 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
97. RPLP2 ENSGALG00000034811 190.55 1681.35 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
98. HBE 188.98 1667.49 hemoglobin subunit epsilon
99. TMSB4X ENSGALG00000026383 187.41 1653.64 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
100. EIF4G2 ENSGALG00000005587 186.37 1644.46 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA