Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_embryo, section s77.

Sample reads: 113,312. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4180.37 36895.65
2. EEF1A EEF1A 1197.36 10567.82
3. MT-ATP6 MT-ATP6 951.27 8395.84
4. GAPDH ENSGALG00000014442 950.50 8389.05 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
5. CIRBP ENSGALG00000030918 895.14 7900.44 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
6. MT-ND5 MT-ND5 864.37 7628.87
7. gga-mir-3533 ENSGALG00000027736 847.46 7479.62 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. RPLP0 ENSGALG00000023294 843.61 7445.64 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
9. RPL4 ENSGALG00000007711 809.01 7140.27 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
10. RPL15 ENSGALG00000011290 748.25 6604.00 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
11. RPS10 ENSGALG00000002813 731.33 6454.67 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
12. RPLP1 ENSGALG00000030878 705.96 6230.75 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
13. RPL35A ENSGALG00000007611, ENSGALG00000041230 685.19 6047.44 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
14. RPL23A ENSGALG00000003966 658.28 5809.93 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. MDK ENSGALG00000008367 654.43 5775.95 midkine [Source:NCBI gene;Acc:423196]
16. RPS23 ENSGALG00000015617 568.30 5015.78 ribosomal protein S23
17. SNRPD1 ENSGALG00000041334 542.93 4791.86 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
18. RPL27A ENSGALG00000005948 540.62 4771.47 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
19. RPL13 ENSGALG00000006179 512.93 4527.08 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. RPS11 ENSGALG00000017299 510.63 4506.78 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
21. PPIA ENSGALG00000028600 471.41 4160.63 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
22. RPL19 ENSGALG00000001658 469.87 4147.04 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
23. RPS8 ENSGALG00000010124 465.25 4106.26 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
24. RPS12 ENSGALG00000013990 449.11 3963.81 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
25. RPS21 ENSGALG00000005338 446.80 3943.43 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
26. RPL26 RPL26 445.26 3929.83
27. RPL7A ENSGALG00000003197 437.57 3861.96 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. RPS2 ENSGALG00000005490 430.65 3800.89 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
29. MT-ND4 MT-ND4 429.88 3794.09
30. RPSA 422.19 3726.22 ribosomal protein SA
31. RPS15A ENSGALG00000006771 421.42 3719.42 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. MT-CYB MT-CYB 411.42 3631.16
33. RPL35 ENSGALG00000035677 411.42 3631.16 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
34. RPL38 ENSGALG00000001465 407.58 3597.27 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
35. RPS29 ENSGALG00000012229 405.27 3576.88 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
36. RPS6 ENSGALG00000015082 404.50 3570.09 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
37. RPL8 ENSGALG00000016232 401.43 3542.99 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
38. RPS3A ENSGALG00000010077 394.51 3481.92 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
39. RPL32 ENSGALG00000027142 389.89 3441.14 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
40. GNB2L1 ENSGALG00000000122 386.82 3414.05 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
41. RPL29 ENSGALG00000026978 386.82 3414.05 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
42. RPL27 ENSGALG00000002837 384.51 3393.66 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. RPS16 ENSGALG00000026490 372.20 3285.01 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. HMGN5 ENSGALG00000007131 356.82 3149.27 high mobility group nucleosome binding domain 5, transcript variant X1
45. RPS15 ENSGALG00000015195 350.67 3094.99 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
46. RPS4 RPS4 349.90 3088.19
47. RPL12 ENSGALG00000008806 340.67 3006.73 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. PHB2 ENSGALG00000014567 336.83 2972.84 prohibitin 2 [Source:NCBI gene;Acc:771124]
49. MT-CO1 MT-CO1 334.52 2952.45
50. RPL37 ENSGALG00000014833 332.98 2938.86 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
51. RPS27A ENSGALG00000036790 329.91 2911.76 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
52. RPL36 ENSGALG00000000474 328.37 2898.17 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
53. gga-mir-3527 gga-mir-3527 326.06 2877.78
54. TXN ENSGALG00000015704 324.52 2864.19 thioredoxin [Source:NCBI gene;Acc:396437]
55. RPS28 ENSGALG00000024398 322.99 2850.69 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
56. NME2 ENSGALG00000002932 311.45 2748.84 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
57. ENO1 ENSGALG00000002377 300.69 2653.87 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
58. ALDOC ENSGALG00000026077 295.30 2606.30 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
59. RPL21 ENSGALG00000027035 295.30 2606.30 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
60. ENSGALG00000028649 ENSGALG00000028649 294.53 2599.50
61. ANP32B ENSGALG00000037483 293.76 2592.71 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
62. RPS14 ENSGALG00000004588 279.92 2470.55 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
63. RPL14 ENSGALG00000043379 277.61 2450.17 ribosomal protein L14
64. RPS7 ENSGALG00000016392 267.62 2362.00 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. RPL18A 262.23 2314.42 ribosomal protein L18a
66. EIF5A2 ENSGALG00000009309 258.39 2280.53 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
67. STMN1 ENSGALG00000001475 255.31 2253.35 stathmin 1 [Source:NCBI gene;Acc:396057]
68. ATP5G3 254.54 2246.55 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
69. RPL36AL ENSGALG00000004952 253.78 2239.84 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
70. RPS13 ENSGALG00000006096 253.78 2239.84 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
71. MT-ND3 MT-ND3 251.47 2219.46
72. RPL6 ENSGALG00000004818 249.16 2199.07 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
73. TMSB4X ENSGALG00000026383 249.16 2199.07 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
74. RPL24 ENSGALG00000015339 248.39 2192.27 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
75. SET ENSGALG00000004701 239.93 2117.61 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
76. LDHB ENSGALG00000035836 236.09 2083.71 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
77. EEF1D 229.94 2029.43 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. UBB ENSGALG00000004509 229.17 2022.64 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
79. RPL31 ENSGALG00000016775 227.63 2009.05 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
80. RPL37A ENSGALG00000011472 227.63 2009.05 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
81. RPS20 ENSGALG00000014432 226.09 1995.45 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
82. ENSGALG00000018384 ENSGALG00000018384 224.55 1981.86
83. RPL23 ENSGALG00000001634 224.55 1981.86 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
84. RPL5 ENSGALG00000005922 221.48 1954.77 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
85. ENSGALG00000002696 ENSGALG00000002696 219.94 1941.18
86. TCEB3 ENSGALG00000034625 216.09 1907.20 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
87. SLC25A6_1 ENSGALG00000016691 213.79 1886.90 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
88. CRHOA CRHOA 211.48 1866.51
89. HMGN2 HMGN2 210.71 1859.71
90. RPL10A ENSGALG00000002644 209.94 1852.92 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
91. RPS25 ENSGALG00000007699 203.02 1791.84 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
92. ENSGALG00000028992 ENSGALG00000028992 201.48 1778.25
93. RPLP2 ENSGALG00000034811 201.48 1778.25 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
94. PRDX1 ENSGALG00000010243 199.94 1764.66 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. EIF4G2 ENSGALG00000005587 194.56 1717.17 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
96. AKAP12 ENSGALG00000036240 191.49 1690.08 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
97. FKBP4 ENSGALG00000014331 187.64 1656.10 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
98. RAN ENSGALG00000002569 186.87 1649.30 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
99. MT-ND1 MT-ND1 184.56 1628.91
100. RPL7 ENSGALG00000035252 184.56 1628.91 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA