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Experiment Chicken_E3_embryo, section s73.

Sample reads: 113,334. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4286.65 37823.93
2. EEF1A EEF1A 1202.25 10608.24
3. MT-ATP6 MT-ATP6 1155.37 10194.59
4. MT-ND5 MT-ND5 1002.98 8849.95
5. CIRBP ENSGALG00000030918 937.77 8274.56 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
6. GAPDH ENSGALG00000014442 809.56 7143.28 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
7. gga-mir-3533 ENSGALG00000027736 794.91 7014.01 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. RPL4 ENSGALG00000007711 775.13 6839.48 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
9. RPLP0 ENSGALG00000023294 757.54 6684.27 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
10. RPL23A ENSGALG00000003966 728.97 6432.18 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
11. RPL35A ENSGALG00000007611, ENSGALG00000041230 723.11 6380.48 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
12. RPL15 ENSGALG00000011290 699.67 6173.65 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
13. RPS10 ENSGALG00000002813 696.74 6147.80 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
14. RPLP1 ENSGALG00000030878 668.90 5902.14 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
15. MDK ENSGALG00000008367 627.14 5533.67 midkine [Source:NCBI gene;Acc:423196]
16. RPS23 ENSGALG00000015617 579.51 5113.40 ribosomal protein S23
17. MT-ND4 MT-ND4 548.01 4835.45
18. RPL27A ENSGALG00000005948 528.96 4667.36 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
19. RPS11 ENSGALG00000017299 516.51 4557.51 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
20. PPIA ENSGALG00000028600 507.72 4479.95 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
21. RPS21 ENSGALG00000005338 490.13 4324.74 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
22. SNRPD1 ENSGALG00000041334 485.00 4279.47 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
23. MT-CYB MT-CYB 474.75 4189.03
24. RPSA 471.08 4156.65 ribosomal protein SA
25. HBG1 HBG1 449.11 3962.79
26. RPS8 ENSGALG00000010124 444.71 3923.97 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
27. RPL13 ENSGALG00000006179 443.24 3911.00 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
28. RPL38 ENSGALG00000001465 438.85 3872.26 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
29. HBZ ENSGALG00000023740 433.72 3827.00 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
30. RPL26 RPL26 429.32 3788.17
31. RPS15A ENSGALG00000006771 429.32 3788.17 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. RPL35 ENSGALG00000035677 426.39 3762.32 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
33. RPL29 ENSGALG00000026978 423.46 3736.47 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
34. RPL19 ENSGALG00000001658 412.47 3639.49 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. MT-CO1 MT-CO1 411.74 3633.05
36. RPL27 ENSGALG00000002837 406.61 3587.79 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
37. RPS29 ENSGALG00000012229 400.75 3536.08 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
38. HMGN5 ENSGALG00000007131 394.16 3477.93 high mobility group nucleosome binding domain 5, transcript variant X1
39. RPS2 ENSGALG00000005490 392.69 3464.96 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
40. RPS6 ENSGALG00000015082 388.30 3426.23 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
41. gga-mir-3527 gga-mir-3527 386.10 3406.81
42. RPL7A ENSGALG00000003197 384.63 3393.84 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
43. RPS16 ENSGALG00000026490 380.97 3361.55 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. GNB2L1 ENSGALG00000000122 375.84 3316.28 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
45. RPL37 ENSGALG00000014833 375.11 3309.84 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
46. RPS3A ENSGALG00000010077 361.92 3193.46 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
47. RPL32 ENSGALG00000027142 354.60 3128.87 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
48. RPL8 ENSGALG00000016232 352.40 3109.46 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
49. RPS15 ENSGALG00000015195 342.87 3025.37 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
50. NME2 ENSGALG00000002932 342.14 3018.93 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
51. RPL36 ENSGALG00000000474 341.41 3012.49 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
52. RPS4 RPS4 337.01 2973.66
53. RPS27A ENSGALG00000036790 333.35 2941.37 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. PHB2 ENSGALG00000014567 326.02 2876.69 prohibitin 2 [Source:NCBI gene;Acc:771124]
55. RPL12 ENSGALG00000008806 317.96 2805.57 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
56. RPS12 ENSGALG00000013990 315.77 2786.25 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
57. ANP32B ENSGALG00000037483 308.44 2721.57 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
58. MT-ND3 MT-ND3 306.24 2702.16
59. HBE 305.51 2695.72 hemoglobin subunit epsilon
60. RPL21 ENSGALG00000027035 298.92 2637.57 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
61. RPS28 ENSGALG00000024398 288.66 2547.04 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
62. TXN ENSGALG00000015704 288.66 2547.04 thioredoxin [Source:NCBI gene;Acc:396437]
63. RPL37A ENSGALG00000011472 280.60 2475.92 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
64. RPS14 ENSGALG00000004588 275.47 2430.65 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
65. RPL14 ENSGALG00000043379 271.81 2398.36 ribosomal protein L14
66. RPL23 ENSGALG00000001634 268.14 2365.98 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
67. RPS7 ENSGALG00000016392 266.68 2353.09 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
68. MT-ND1 MT-ND1 265.21 2340.12
69. RPL6 ENSGALG00000004818 264.48 2333.68 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
70. LDHB ENSGALG00000035836 262.28 2314.27 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
71. ATP5G3 256.42 2262.56 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
72. RPL18A 254.96 2249.68 ribosomal protein L18a
73. RPL24 ENSGALG00000015339 254.96 2249.68 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
74. ENSGALG00000028649 ENSGALG00000028649 254.22 2243.15
75. ENO1 ENSGALG00000002377 248.36 2191.44 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
76. ENSGALG00000018384 ENSGALG00000018384 246.90 2178.56
77. UBB ENSGALG00000004509 242.50 2139.74 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
78. EIF5A2 ENSGALG00000009309 238.84 2107.44 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
79. PRDX1 ENSGALG00000010243 235.91 2081.59 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
80. STMN1 ENSGALG00000001475 234.44 2068.62 stathmin 1 [Source:NCBI gene;Acc:396057]
81. ALDOC ENSGALG00000026077 233.71 2062.18 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
82. RPS13 ENSGALG00000006096 232.98 2055.74 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
83. SLC25A6_1 ENSGALG00000016691 230.05 2029.88 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
84. RPL36AL ENSGALG00000004952 227.85 2010.47 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
85. RPL5 ENSGALG00000005922 216.13 1907.06 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
86. TCEB3 ENSGALG00000034625 215.39 1900.53 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
87. EEF1D 212.46 1874.67 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. ENSGALG00000002696 ENSGALG00000002696 210.27 1855.35
89. RPL7 ENSGALG00000035252 208.80 1842.38 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
90. RPS20 ENSGALG00000014432 207.34 1829.50 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
91. SET ENSGALG00000004701 199.28 1758.38 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
92. CRHOA CRHOA 198.54 1751.85
93. EIF4G2 ENSGALG00000005587 195.61 1726.00 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
94. HMGN2 HMGN2 195.61 1726.00
95. RPS25 ENSGALG00000007699 193.42 1706.67 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
96. H3-IX H3-IX 191.95 1693.70
97. RAN ENSGALG00000002569 191.95 1693.70 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
98. ACTC1 ENSGALG00000009844 190.49 1680.82 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
99. FKBP4 ENSGALG00000014331 188.29 1661.41 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
100. MYH15 ENSGALG00000015358 187.55 1654.88 myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA