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Experiment Chicken_E3_embryo, section s66.

Sample reads: 113,451. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4215.97 37163.04
2. MT-ATP6 MT-ATP6 1074.27 9469.50
3. MT-ND5 MT-ND5 1070.48 9436.09
4. CIRBP ENSGALG00000030918 1003.44 8845.15 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
5. gga-mir-3533 ENSGALG00000027736 959.65 8459.15 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. EEF1A EEF1A 911.53 8034.98
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 802.86 7077.07 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPLP0 ENSGALG00000023294 748.26 6595.78 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
9. RPL4 ENSGALG00000007711 739.07 6514.77 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
10. RPL15 ENSGALG00000011290 735.28 6481.36 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
11. GAPDH ENSGALG00000014442 721.76 6362.19 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. MDK ENSGALG00000008367 703.38 6200.17 midkine [Source:NCBI gene;Acc:423196]
13. RPS10 ENSGALG00000002813 690.95 6090.60 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
14. RPL23A ENSGALG00000003966 688.24 6066.72 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. RPLP1 ENSGALG00000030878 668.24 5890.42 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
16. RPS23 ENSGALG00000015617 631.48 5566.39 ribosomal protein S23
17. SNRPD1 ENSGALG00000041334 569.84 5023.04 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
18. RPL13 ENSGALG00000006179 543.35 4789.54 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPL27A ENSGALG00000005948 507.13 4470.26 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
20. RPL21 ENSGALG00000027035 460.63 4060.37 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
21. HMGN5 ENSGALG00000007131 459.55 4050.85 high mobility group nucleosome binding domain 5, transcript variant X1
22. RPS15A ENSGALG00000006771 451.44 3979.36 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
23. RPL19 ENSGALG00000001658 449.28 3960.32 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
24. MT-CYB MT-CYB 448.20 3950.80
25. MT-ND4 MT-ND4 438.47 3865.04
26. RPS8 ENSGALG00000010124 435.76 3841.15 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
27. RPSA 429.27 3783.94 ribosomal protein SA
28. RPS21 ENSGALG00000005338 426.03 3755.38 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. RPS12 ENSGALG00000013990 424.95 3745.86 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
30. RPS3A ENSGALG00000010077 424.41 3741.10 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
31. RPS15 ENSGALG00000015195 423.33 3731.58 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
32. PPIA ENSGALG00000028600 418.46 3688.65 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
33. RPS2 ENSGALG00000005490 417.38 3679.13 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
34. RPL35 ENSGALG00000035677 399.00 3517.12 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
35. gga-mir-3527 gga-mir-3527 391.97 3455.15
36. RPL7A ENSGALG00000003197 391.43 3450.39 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
37. RPL26 RPL26 389.81 3436.11
38. RPL29 ENSGALG00000026978 389.81 3436.11 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
39. RPL8 ENSGALG00000016232 389.27 3431.35 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
40. RPL27 ENSGALG00000002837 383.32 3378.90 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
41. RPS29 ENSGALG00000012229 378.99 3340.73 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
42. PHB2 ENSGALG00000014567 374.13 3297.89 prohibitin 2 [Source:NCBI gene;Acc:771124]
43. RPS16 ENSGALG00000026490 369.26 3254.96 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. RPL38 ENSGALG00000001465 365.48 3221.64 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
45. ANP32B ENSGALG00000037483 363.32 3202.60 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
46. RPL32 ENSGALG00000027142 361.15 3183.47 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
47. RPS11 ENSGALG00000017299 356.29 3140.63 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
48. GNB2L1 ENSGALG00000000122 351.42 3097.71 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
49. RPL6 ENSGALG00000004818 350.34 3088.19 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
50. RPS28 ENSGALG00000024398 349.80 3083.43 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
51. RPS6 ENSGALG00000015082 338.99 2988.14 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
52. TXN ENSGALG00000015704 328.17 2892.76 thioredoxin [Source:NCBI gene;Acc:396437]
53. MT-CO1 MT-CO1 327.63 2888.00
54. RPL37 ENSGALG00000014833 322.77 2845.16 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
55. NME2 ENSGALG00000002932 316.28 2787.95 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
56. RPL36 ENSGALG00000000474 311.95 2749.78 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
57. ENSGALG00000028649 ENSGALG00000028649 310.33 2735.50
58. RPL12 ENSGALG00000008806 310.33 2735.50 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
59. RPL37A ENSGALG00000011472 307.63 2711.70 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
60. RPS4 RPS4 290.33 2559.21
61. RPS27A ENSGALG00000036790 280.60 2473.44 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
62. RPL14 ENSGALG00000043379 270.32 2382.82 ribosomal protein L14
63. ENSGALG00000018384 ENSGALG00000018384 269.24 2373.30
64. EIF5A2 ENSGALG00000009309 266.00 2344.74 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
65. RPS7 ENSGALG00000016392 263.84 2325.70 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
66. RPS14 ENSGALG00000004588 260.59 2297.06 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. SET ENSGALG00000004701 254.65 2244.70 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
68. STMN1 ENSGALG00000001475 251.40 2216.05 stathmin 1 [Source:NCBI gene;Acc:396057]
69. MT-ND3 MT-ND3 250.86 2211.29
70. RPL23 ENSGALG00000001634 249.78 2201.77 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
71. RPL24 ENSGALG00000015339 249.78 2201.77 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
72. RPL36AL ENSGALG00000004952 246.54 2173.21 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
73. RPL18A 245.45 2163.60 ribosomal protein L18a
74. HBG1 HBG1 244.91 2158.84
75. ATP5G3 241.13 2125.52 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
76. RPS20 ENSGALG00000014432 240.59 2120.76 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
77. MT-ND1 MT-ND1 235.18 2073.07
78. TCEB3 ENSGALG00000034625 234.10 2063.55 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
79. ENO1 ENSGALG00000002377 233.56 2058.79 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
80. LDHB ENSGALG00000035836 228.69 2015.86 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
81. PRDX1 ENSGALG00000010243 227.07 2001.58 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
82. RPL5 ENSGALG00000005922 226.53 1996.82 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
83. RPS13 ENSGALG00000006096 225.99 1992.06 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
84. ENSGALG00000002696 ENSGALG00000002696 221.13 1949.22
85. EEF1D 217.88 1920.57 eukaryotic translation elongation factor 1 delta, transcript variant X13
86. TMSB4X ENSGALG00000026383 214.10 1887.25 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
87. AKAP12 ENSGALG00000036240 213.02 1877.73 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
88. CRHOA CRHOA 210.85 1858.61
89. SLC25A6_1 ENSGALG00000016691 210.85 1858.61 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
90. HBZ ENSGALG00000023740 198.96 1753.80 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
91. ALDOC ENSGALG00000026077 197.34 1739.52 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
92. HMGN2 HMGN2 197.34 1739.52
93. RPL31 ENSGALG00000016775 197.34 1739.52 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
94. ENSGALG00000028992 ENSGALG00000028992 194.09 1710.87
95. RPS25 ENSGALG00000007699 194.09 1710.87 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
96. HNRNPDL ENSGALG00000023199 191.93 1691.83 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
97. HSPA8 ENSGALG00000006512 191.39 1687.07 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
98. UBB ENSGALG00000004509 186.52 1644.14 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
99. RPL7 ENSGALG00000035252 185.98 1639.38 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
100. RPLP2 ENSGALG00000034811 184.36 1625.10 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA