Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_embryo, section s55.

Sample reads: 113,490. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4397.58 38749.60
2. MT-ATP6 MT-ATP6 1149.56 10129.43
3. MT-ND5 MT-ND5 1021.50 9001.02
4. gga-mir-3533 ENSGALG00000027736 985.20 8681.16 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. EEF1A EEF1A 978.14 8618.95
6. RPLP0 ENSGALG00000023294 963.01 8485.63 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 919.65 8103.56 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS10 ENSGALG00000002813 841.00 7410.53 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. CIRBP ENSGALG00000030918 811.75 7152.80 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
10. MDK ENSGALG00000008367 745.20 6566.39 midkine [Source:NCBI gene;Acc:423196]
11. RPL23A ENSGALG00000003966 728.06 6415.35 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
12. RPLP1 ENSGALG00000030878 725.03 6388.66 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
13. RPL4 ENSGALG00000007711 668.56 5891.07 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. RPL15 ENSGALG00000011290 652.43 5748.94 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
15. GAPDH ENSGALG00000014442 648.39 5713.34 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. PPIA ENSGALG00000028600 591.92 5215.75 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
17. RPS23 ENSGALG00000015617 548.56 4833.68 ribosomal protein S23
18. RPL27A ENSGALG00000005948 521.34 4593.83 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
19. RPS21 ENSGALG00000005338 511.25 4504.92 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
20. RPS11 ENSGALG00000017299 505.20 4451.61 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
21. RPS8 ENSGALG00000010124 496.13 4371.69 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. RPSA 479.99 4229.47 ribosomal protein SA
23. RPS29 ENSGALG00000012229 477.98 4211.76 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
24. RPL8 ENSGALG00000016232 469.91 4140.65 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
25. GNB2L1 ENSGALG00000000122 467.89 4122.85 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
26. RPL7A ENSGALG00000003197 449.74 3962.92 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. SNRPD1 ENSGALG00000041334 449.74 3962.92 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
28. RPL19 ENSGALG00000001658 447.72 3945.12 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
29. MT-CYB MT-CYB 445.71 3927.41
30. RPS6 ENSGALG00000015082 443.69 3909.61 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
31. RPS12 ENSGALG00000013990 442.68 3900.71 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
32. ENSGALG00000028649 ENSGALG00000028649 432.60 3811.89
33. MT-ND4 MT-ND4 426.55 3758.58
34. RPL38 ENSGALG00000001465 425.54 3749.68 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
35. gga-mir-3527 gga-mir-3527 420.50 3705.27
36. RPL26 RPL26 418.48 3687.47
37. RPS3A ENSGALG00000010077 414.45 3651.96 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
38. RPL29 ENSGALG00000026978 413.44 3643.06 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
39. MT-CO1 MT-CO1 410.41 3616.36
40. ENSGALG00000018384 ENSGALG00000018384 409.41 3607.55
41. RPL27 ENSGALG00000002837 407.39 3589.75 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
42. HMGN5 ENSGALG00000007131 392.26 3456.43 high mobility group nucleosome binding domain 5, transcript variant X1
43. RPS2 ENSGALG00000005490 390.25 3438.72 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
44. RPL12 ENSGALG00000008806 387.22 3412.02 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
45. RPS15A ENSGALG00000006771 382.18 3367.61 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. RPS28 ENSGALG00000024398 371.09 3269.89 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
47. ALDOC ENSGALG00000026077 369.07 3252.09 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
48. RPL37 ENSGALG00000014833 364.03 3207.68 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
49. RPS16 ENSGALG00000026490 361.00 3180.98 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. TXN ENSGALG00000015704 359.99 3172.08 thioredoxin [Source:NCBI gene;Acc:396437]
51. RPL13 ENSGALG00000006179 347.89 3065.46 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
52. RPL36 ENSGALG00000000474 346.89 3056.65 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
53. RPS27A ENSGALG00000036790 342.85 3021.05 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. RPS4 RPS4 340.84 3003.34
55. RPS15 ENSGALG00000015195 333.78 2941.13 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
56. PHB2 ENSGALG00000014567 332.77 2932.23 prohibitin 2 [Source:NCBI gene;Acc:771124]
57. RPL32 ENSGALG00000027142 329.74 2905.53 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
58. ANP32B ENSGALG00000037483 316.63 2790.01 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
59. RPS14 ENSGALG00000004588 306.55 2701.19 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
60. ATP5G3 304.53 2683.39 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
61. NME2 ENSGALG00000002932 302.52 2665.68 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. RPL21 ENSGALG00000027035 302.52 2665.68 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
63. RPL35 ENSGALG00000035677 294.45 2594.57 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
64. RPS7 ENSGALG00000016392 289.41 2550.16 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. EIF5A2 ENSGALG00000009309 286.38 2523.46 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
66. TCEB3 ENSGALG00000034625 275.29 2425.74 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
67. RPL24 ENSGALG00000015339 267.22 2354.63 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
68. RPL14 ENSGALG00000043379 260.16 2292.42 ribosomal protein L14
69. RPL23 ENSGALG00000001634 260.16 2292.42 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
70. LDHB ENSGALG00000035836 259.16 2283.61 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
71. RPL18A 259.16 2283.61 ribosomal protein L18a
72. RPS20 ENSGALG00000014432 258.15 2274.71 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
73. RPL37A ENSGALG00000011472 254.11 2239.11 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
74. SET ENSGALG00000004701 251.09 2212.50 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
75. ENO1 ENSGALG00000002377 248.06 2185.80 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
76. RPL6 ENSGALG00000004818 246.05 2168.09 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
77. RPL7 ENSGALG00000035252 236.97 2088.08 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
78. RPL36AL ENSGALG00000004952 235.96 2079.18 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
79. RPL5 ENSGALG00000005922 234.95 2070.28 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
80. HSPA8 ENSGALG00000006512 232.94 2052.57 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
81. TMSB4X ENSGALG00000026383 231.93 2043.67 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
82. RPS25 ENSGALG00000007699 225.88 1990.36 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
83. ENSGALG00000002696 ENSGALG00000002696 224.87 1981.46
84. ENSGALG00000022570 ENSGALG00000022570 222.85 1963.66
85. HBG1 HBG1 218.82 1928.15
86. ENSGALG00000028992 ENSGALG00000028992 216.80 1910.35
87. EIF4G2 ENSGALG00000005587 215.80 1901.54 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
88. CRHOA CRHOA 214.79 1892.64
89. PRDX1 ENSGALG00000010243 213.78 1883.74 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
90. STMN1 ENSGALG00000001475 213.78 1883.74 stathmin 1 [Source:NCBI gene;Acc:396057]
91. RPL10A ENSGALG00000002644 206.72 1821.53 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
92. SEC61G ENSGALG00000037863 204.70 1803.73 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
93. RAN ENSGALG00000002569 203.69 1794.83 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
94. CCT4 ENSGALG00000008812 201.68 1777.12 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
95. HMGN2 HMGN2 199.66 1759.32
96. MT-ND1 MT-ND1 198.65 1750.42
97. RPLP2 ENSGALG00000034811 198.65 1750.42 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
98. UBB ENSGALG00000004509 197.64 1741.52 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
99. SLC25A6_1 ENSGALG00000016691 196.64 1732.71 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
100. MT-ND3 MT-ND3 195.63 1723.81
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA