Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_embryo, section s34.

Sample reads: 113,688. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3331.69 29306.67
2. HBZ ENSGALG00000023740 1528.10 13441.68 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
3. CIRBP ENSGALG00000030918 1386.05 12192.16 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. EEF1A EEF1A 1305.70 11485.38
5. RPS10 ENSGALG00000002813 1287.05 11321.32 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. gga-mir-3533 ENSGALG00000027736 1147.87 10097.05 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. RPLP0 ENSGALG00000023294 1083.30 9529.07 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
8. HBG1 HBG1 895.34 7875.71
9. GAPDH ENSGALG00000014442 845.12 7433.96 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. RPS23 ENSGALG00000015617 744.68 6550.46 ribosomal protein S23
11. MT-ATP6 MT-ATP6 738.94 6499.96
12. HBE 713.11 6272.76 hemoglobin subunit epsilon
13. RPL4 ENSGALG00000007711 710.24 6247.51 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. RPL15 ENSGALG00000011290 707.37 6222.26 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
15. RPL35A ENSGALG00000007611, ENSGALG00000041230 691.59 6083.46 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
16. RPL23A ENSGALG00000003966 674.37 5931.99 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
17. RPLP1 ENSGALG00000030878 672.94 5919.41 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
18. SNRPD1 ENSGALG00000041334 634.20 5578.64 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
19. RPL13 ENSGALG00000006179 589.72 5187.38 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. MT-ND5 MT-ND5 569.63 5010.66
21. RPL35 ENSGALG00000035677 565.33 4972.83 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
22. RPS2 ENSGALG00000005490 562.46 4947.59 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
23. RPS15 ENSGALG00000015195 545.24 4796.11 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
24. RPS21 ENSGALG00000005338 513.67 4518.41 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
25. GNB2L1 ENSGALG00000000122 497.89 4379.61 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
26. RPSA 492.15 4329.12 ribosomal protein SA
27. RPL29 ENSGALG00000026978 490.71 4316.45 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
28. PPIA ENSGALG00000028600 463.45 4076.66 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
29. RPS11 ENSGALG00000017299 462.02 4064.08 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
30. MT-ND4 MT-ND4 447.67 3937.86
31. RPS29 ENSGALG00000012229 447.67 3937.86 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
32. RPL27A ENSGALG00000005948 446.23 3925.19 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPS15A ENSGALG00000006771 443.36 3899.94 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
34. RPS8 ENSGALG00000010124 439.06 3862.12 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
35. RPS12 ENSGALG00000013990 433.32 3811.63 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
36. RPL8 ENSGALG00000016232 427.58 3761.14 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
37. RPL7A ENSGALG00000003197 426.15 3748.56 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
38. RPS27A ENSGALG00000036790 416.10 3660.16 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. MDK ENSGALG00000008367 413.23 3634.91 midkine [Source:NCBI gene;Acc:423196]
40. gga-mir-3527 gga-mir-3527 411.80 3622.33
41. RPL38 ENSGALG00000001465 410.36 3609.66 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
42. RPL32 ENSGALG00000027142 384.54 3382.54 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
43. RPL27 ENSGALG00000002837 381.67 3357.30 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
44. RPL36 ENSGALG00000000474 381.67 3357.30 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
45. RPL19 ENSGALG00000001658 375.93 3306.81 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
46. MT-CYB MT-CYB 374.49 3294.14
47. TXN ENSGALG00000015704 373.06 3281.56 thioredoxin [Source:NCBI gene;Acc:396437]
48. RPS3A ENSGALG00000010077 371.62 3268.89 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
49. RPL18A 363.01 3193.16 ribosomal protein L18a
50. RPS6 ENSGALG00000015082 363.01 3193.16 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
51. RPL37A ENSGALG00000011472 351.53 3092.18 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
52. RPL6 ENSGALG00000004818 347.23 3054.35 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
53. ALDOC ENSGALG00000026077 341.49 3003.86 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
54. RPL24 ENSGALG00000015339 340.06 2991.28 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
55. RPS4 RPS4 338.62 2978.62
56. RPL12 ENSGALG00000008806 334.32 2940.79 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
57. NME2 ENSGALG00000002932 330.01 2902.88 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
58. RPL23 ENSGALG00000001634 325.71 2865.05 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
59. ENO1 ENSGALG00000002377 315.66 2776.65 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
60. RPL37 ENSGALG00000014833 315.66 2776.65 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
61. RPL21 ENSGALG00000027035 312.79 2751.41 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
62. RPL14 ENSGALG00000043379 308.49 2713.58 ribosomal protein L14
63. RPL26 RPL26 304.19 2675.76
64. RPS16 ENSGALG00000026490 302.75 2663.09 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
65. TCEB3 ENSGALG00000034625 302.75 2663.09 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
66. RPS14 ENSGALG00000004588 291.27 2562.11 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. RPS28 ENSGALG00000024398 282.66 2486.37 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
68. ANP32B ENSGALG00000037483 279.79 2461.13 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
69. ENSGALG00000028649 ENSGALG00000028649 279.79 2461.13
70. MT-ND3 MT-ND3 279.79 2461.13
71. ATP5G3 274.05 2410.64 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
72. RPS13 ENSGALG00000006096 265.44 2334.90 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
73. PHB2 ENSGALG00000014567 264.01 2322.32 prohibitin 2 [Source:NCBI gene;Acc:771124]
74. RPL7 ENSGALG00000035252 262.58 2309.74 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
75. EIF5A2 ENSGALG00000009309 259.71 2284.50 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
76. MT-CO1 MT-CO1 258.27 2271.83
77. HMGN5 ENSGALG00000007131 253.97 2234.01 high mobility group nucleosome binding domain 5, transcript variant X1
78. HMGN2 HMGN2 248.23 2183.51
79. RPL5 ENSGALG00000005922 246.79 2170.85 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
80. EEF1D 245.36 2158.27 eukaryotic translation elongation factor 1 delta, transcript variant X13
81. RPL36AL ENSGALG00000004952 245.36 2158.27 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
82. TMSB4X ENSGALG00000026383 245.36 2158.27 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
83. PRDX1 ENSGALG00000010243 236.75 2082.53 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
84. RPS17 ENSGALG00000002157 235.31 2069.87 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
85. H3-IX H3-IX 229.57 2019.37
86. RPL31 ENSGALG00000016775 229.57 2019.37 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. LDHB ENSGALG00000035836 223.83 1968.88 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
88. STMN1 ENSGALG00000001475 220.96 1943.64 stathmin 1 [Source:NCBI gene;Acc:396057]
89. CRHOA CRHOA 218.10 1918.48
90. RPS7 ENSGALG00000016392 213.79 1880.57 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
91. HNRNPDL ENSGALG00000023199 212.36 1867.99 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
92. RPS20 ENSGALG00000014432 212.36 1867.99 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
93. SLC25A6_1 ENSGALG00000016691 210.92 1855.32 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
94. RPS25 ENSGALG00000007699 208.05 1830.08 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
95. EIF4G2 ENSGALG00000005587 206.62 1817.50 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
96. SEC61G ENSGALG00000037863 205.18 1804.83 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
97. UBB ENSGALG00000004509 203.75 1792.25 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
98. MT-ND1 MT-ND1 202.31 1779.59
99. FTH FTH 200.88 1767.01
100. ENSGALG00000002696 ENSGALG00000002696 198.01 1741.76
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA