Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_embryo, section s31.

Sample reads: 113,732. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4238.56 37269.47
2. HBG1 HBG1 1535.01 13497.28
3. HBZ ENSGALG00000023740 1369.46 12041.60 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
4. CIRBP ENSGALG00000030918 1073.71 9441.09 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 994.95 8748.55 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. EEF1A EEF1A 990.12 8706.08
7. RPLP0 ENSGALG00000023294 978.87 8607.16 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
8. RPS10 ENSGALG00000002813 940.30 8268.02 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. gga-mir-3533 ENSGALG00000027736 929.04 8169.01 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. MT-ND5 MT-ND5 867.97 7632.02
11. MT-ATP6 MT-ATP6 856.71 7533.01
12. RPS23 ENSGALG00000015617 814.92 7165.56 ribosomal protein S23
13. RPL23A ENSGALG00000003966 811.71 7137.33 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
14. HBE 779.56 6854.64 hemoglobin subunit epsilon
15. RPLP1 ENSGALG00000030878 758.67 6670.95 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
16. GAPDH ENSGALG00000014442 742.59 6529.56 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. RPL15 ENSGALG00000011290 734.56 6458.95 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
18. RPL13 ENSGALG00000006179 691.16 6077.34 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPL4 ENSGALG00000007711 681.51 5992.49 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
20. SNRPD1 ENSGALG00000041334 673.48 5921.88 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
21. RPL35 ENSGALG00000035677 588.29 5172.81 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
22. RPL29 ENSGALG00000026978 585.07 5144.50 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
23. RPS2 ENSGALG00000005490 557.75 4904.27 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
24. RPS15 ENSGALG00000015195 544.89 4791.19 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
25. RPL27A ENSGALG00000005948 541.67 4762.88 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
26. RPS8 ENSGALG00000010124 522.39 4593.35 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
27. RPS15A ENSGALG00000006771 517.56 4550.88 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
28. RPSA 509.53 4480.28 ribosomal protein SA
29. RPS3A ENSGALG00000010077 503.10 4423.74 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
30. RPL38 ENSGALG00000001465 472.56 4155.20 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
31. RPS21 ENSGALG00000005338 467.74 4112.82 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
32. RPS29 ENSGALG00000012229 466.13 4098.66 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
33. PPIA ENSGALG00000028600 454.88 3999.74 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
34. RPS12 ENSGALG00000013990 451.66 3971.43 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
35. RPL7A ENSGALG00000003197 448.45 3943.20 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. RPL32 ENSGALG00000027142 445.23 3914.89 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
37. RPS11 ENSGALG00000017299 438.80 3858.35 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
38. RPL19 ENSGALG00000001658 435.59 3830.12 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
39. gga-mir-3527 gga-mir-3527 416.30 3660.51
40. RPL27 ENSGALG00000002837 411.48 3618.13 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
41. RPL12 ENSGALG00000008806 403.44 3547.43 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
42. RPL8 ENSGALG00000016232 398.62 3505.05 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
43. MDK ENSGALG00000008367 395.41 3476.82 midkine [Source:NCBI gene;Acc:423196]
44. RPL6 ENSGALG00000004818 390.58 3434.35 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
45. RPS27A ENSGALG00000036790 385.76 3391.97 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
46. RPL36 ENSGALG00000000474 382.55 3363.75 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
47. RPS4 RPS4 382.55 3363.75
48. RPS6 ENSGALG00000015082 377.73 3321.36 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
49. RPL26 RPL26 376.12 3307.21
50. MT-CYB MT-CYB 368.08 3236.51
51. GNB2L1 ENSGALG00000000122 358.44 3151.75 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
52. NME2 ENSGALG00000002932 352.01 3095.21 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
53. RPS16 ENSGALG00000026490 352.01 3095.21 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
54. TXN ENSGALG00000015704 352.01 3095.21 thioredoxin [Source:NCBI gene;Acc:396437]
55. MT-CO1 MT-CO1 350.40 3081.05
56. MT-ND4 MT-ND4 350.40 3081.05
57. TMSB4X ENSGALG00000026383 350.40 3081.05 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
58. RPL37A ENSGALG00000011472 331.11 2911.44 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
59. ENSGALG00000028649 ENSGALG00000028649 315.04 2770.13
60. RPL37 ENSGALG00000014833 315.04 2770.13 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
61. RPS14 ENSGALG00000004588 311.82 2741.82 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
62. TCEB3 ENSGALG00000034625 307.00 2699.44 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. RPS13 ENSGALG00000006096 302.18 2657.06 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
64. EIF5A2 ENSGALG00000009309 300.57 2642.90 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
65. RPS28 ENSGALG00000024398 297.36 2614.67 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
66. RPL24 ENSGALG00000015339 295.75 2600.52 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
67. RPL23 ENSGALG00000001634 294.14 2586.36 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
68. MT-ND1 MT-ND1 287.71 2529.82
69. RPL36AL ENSGALG00000004952 274.86 2416.83 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
70. MT-ND3 MT-ND3 266.82 2346.14
71. PRDX1 ENSGALG00000010243 266.82 2346.14 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
72. LDHB ENSGALG00000035836 263.60 2317.82 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
73. RPL5 ENSGALG00000005922 263.60 2317.82 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
74. HMGN2 HMGN2 262.00 2303.75
75. RPL14 ENSGALG00000043379 262.00 2303.75 ribosomal protein L14
76. RPL21 ENSGALG00000027035 262.00 2303.75 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
77. ALDOC ENSGALG00000026077 257.17 2261.28 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
78. RPL18A 257.17 2261.28 ribosomal protein L18a
79. ATP5G3 249.14 2190.68 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
80. ENO1 ENSGALG00000002377 249.14 2190.68 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
81. H3-IX H3-IX 245.92 2162.36
82. EEF1D 244.32 2148.30 eukaryotic translation elongation factor 1 delta, transcript variant X13
83. RPL31 ENSGALG00000016775 241.10 2119.98 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
84. ANP32B ENSGALG00000037483 237.89 2091.76 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
85. RPL7 ENSGALG00000035252 237.89 2091.76 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
86. ENSGALG00000028992 ENSGALG00000028992 236.28 2077.60
87. PHB2 ENSGALG00000014567 236.28 2077.60 prohibitin 2 [Source:NCBI gene;Acc:771124]
88. CRHOA CRHOA 233.06 2049.29
89. SLC25A6_1 ENSGALG00000016691 233.06 2049.29 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
90. RPS7 ENSGALG00000016392 231.46 2035.22 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
91. RPS20 ENSGALG00000014432 225.03 1978.68 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
92. ENSGALG00000002696 ENSGALG00000002696 223.42 1964.52
93. RAN ENSGALG00000002569 220.21 1936.30 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
94. EIF4G2 ENSGALG00000005587 205.74 1809.06 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
95. HMGN5 ENSGALG00000007131 204.13 1794.91 high mobility group nucleosome binding domain 5, transcript variant X1
96. RPS17 ENSGALG00000002157 202.53 1780.84 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
97. RPLP2 ENSGALG00000034811 200.92 1766.68 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
98. UBB ENSGALG00000004509 200.92 1766.68 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
99. HNRNPDL ENSGALG00000023199 194.49 1710.14 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
100. STMN1 ENSGALG00000001475 194.49 1710.14 stathmin 1 [Source:NCBI gene;Acc:396057]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA