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Experiment Chicken_E3_embryo, section s26.

Sample reads: 113,675. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3746.52 32959.60
2. EEF1A EEF1A 1542.92 13573.67
3. CIRBP ENSGALG00000030918 1165.76 10255.65 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. RPLP0 ENSGALG00000023294 1099.82 9675.55 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. gga-mir-3533 ENSGALG00000027736 1023.34 9002.72 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. MT-ATP6 MT-ATP6 1008.83 8875.07
7. MT-ND5 MT-ND5 946.85 8329.81
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 933.66 8213.77 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. RPL15 ENSGALG00000011290 833.44 7332.10 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
10. RPS10 ENSGALG00000002813 813.66 7158.08 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. RPL23A ENSGALG00000003966 807.06 7100.02 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
12. RPS23 ENSGALG00000015617 770.14 6775.22 ribosomal protein S23
13. GAPDH ENSGALG00000014442 735.85 6473.56 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. PPIA ENSGALG00000028600 632.99 5568.66 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
15. RPS11 ENSGALG00000017299 622.44 5475.85 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
16. RPL4 ENSGALG00000007711 609.25 5359.81 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
17. RPL13 ENSGALG00000006179 598.70 5267.00 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
18. RPLP1 ENSGALG00000030878 586.84 5162.66 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
19. SNRPD1 ENSGALG00000041334 576.29 5069.85 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
20. HBG1 HBG1 542.00 4768.19
21. RPSA 526.17 4628.92 ribosomal protein SA
22. RPL35 ENSGALG00000035677 524.86 4617.40 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
23. RPS21 ENSGALG00000005338 514.31 4524.59 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
24. RPS12 ENSGALG00000013990 497.16 4373.71 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
25. HBZ ENSGALG00000023740 483.97 4257.67 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
26. MT-ND4 MT-ND4 478.70 4211.31
27. RPS15 ENSGALG00000015195 478.70 4211.31 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
28. RPL19 ENSGALG00000001658 474.74 4176.47 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
29. RPL29 ENSGALG00000026978 473.43 4164.95 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPL27A ENSGALG00000005948 469.47 4130.11 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
31. MDK ENSGALG00000008367 464.19 4083.66 midkine [Source:NCBI gene;Acc:423196]
32. RPS29 ENSGALG00000012229 462.88 4072.14 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
33. GNB2L1 ENSGALG00000000122 460.24 4048.91 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
34. RPS2 ENSGALG00000005490 451.01 3967.71 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
35. RPS8 ENSGALG00000010124 449.69 3956.10 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
36. MT-CYB MT-CYB 424.63 3735.64
37. RPL32 ENSGALG00000027142 423.31 3724.02 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
38. RPS27A ENSGALG00000036790 415.40 3654.44 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. gga-mir-3527 gga-mir-3527 412.76 3631.21
40. TCEB3 ENSGALG00000034625 403.53 3550.01 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
41. RPL12 ENSGALG00000008806 400.89 3526.79 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
42. RPL7A ENSGALG00000003197 395.62 3480.42 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
43. ALDOC ENSGALG00000026077 392.98 3457.20 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
44. RPL27 ENSGALG00000002837 392.98 3457.20 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
45. RPS15A ENSGALG00000006771 392.98 3457.20 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. RPS6 ENSGALG00000015082 392.98 3457.20 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
47. RPL6 ENSGALG00000004818 387.71 3410.84 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
48. RPS3A ENSGALG00000010077 387.71 3410.84 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
49. RPS4 RPS4 383.75 3376.00
50. RPL38 ENSGALG00000001465 382.43 3364.39 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
51. TXN ENSGALG00000015704 361.33 3178.76 thioredoxin [Source:NCBI gene;Acc:396437]
52. RPS28 ENSGALG00000024398 348.15 3062.81 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
53. HBE 346.83 3051.20 hemoglobin subunit epsilon
54. RPL37 ENSGALG00000014833 346.83 3051.20 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
55. RPL8 ENSGALG00000016232 344.19 3027.97 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
56. RPL36 ENSGALG00000000474 337.60 2970.00 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
57. ENSGALG00000028649 ENSGALG00000028649 336.28 2958.39
58. RPL37A ENSGALG00000011472 323.09 2842.35 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
59. NME2 ENSGALG00000002932 308.58 2714.70 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
60. RPL24 ENSGALG00000015339 308.58 2714.70 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
61. RPL36AL ENSGALG00000004952 304.63 2679.95 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
62. ENO1 ENSGALG00000002377 303.31 2668.34 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
63. RPL26 RPL26 303.31 2668.34
64. EIF5A2 ENSGALG00000009309 298.03 2621.89 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
65. RPL14 ENSGALG00000043379 298.03 2621.89 ribosomal protein L14
66. RPS14 ENSGALG00000004588 291.44 2563.91 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. MT-CO1 MT-CO1 288.80 2540.69
68. RPL21 ENSGALG00000027035 284.85 2505.94 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
69. ATP5G3 282.21 2482.71 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
70. EEF1D 279.57 2459.49 eukaryotic translation elongation factor 1 delta, transcript variant X13
71. MT-ND3 MT-ND3 278.25 2447.87
72. RPL23 ENSGALG00000001634 276.93 2436.26 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
73. ANP32B ENSGALG00000037483 275.62 2424.74 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
74. RPS13 ENSGALG00000006096 272.98 2401.51 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
75. RPL18A 271.66 2389.90 ribosomal protein L18a
76. LDHB ENSGALG00000035836 269.02 2366.67 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
77. TMSB4X ENSGALG00000026383 269.02 2366.67 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
78. PHB2 ENSGALG00000014567 265.07 2331.92 prohibitin 2 [Source:NCBI gene;Acc:771124]
79. PRDX1 ENSGALG00000010243 263.75 2320.31 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
80. RPL5 ENSGALG00000005922 262.43 2308.70 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
81. HMGN2 HMGN2 261.11 2297.09
82. STMN1 ENSGALG00000001475 257.15 2262.25 stathmin 1 [Source:NCBI gene;Acc:396057]
83. FKBP4 ENSGALG00000014331 253.20 2227.50 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
84. RPL7 ENSGALG00000035252 251.88 2215.89 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. MT-ND1 MT-ND1 245.28 2157.82
86. RPS16 ENSGALG00000026490 245.28 2157.82 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
87. RPS20 ENSGALG00000014432 225.50 1983.81 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
88. SLC25A6_1 ENSGALG00000016691 225.50 1983.81 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
89. ENSGALG00000002696 ENSGALG00000002696 220.23 1937.45
90. RPS25 ENSGALG00000007699 217.59 1914.22 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
91. H3-IX H3-IX 212.32 1867.86
92. EIF4G2 ENSGALG00000005587 211.00 1856.25 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
93. HMGN5 ENSGALG00000007131 211.00 1856.25 high mobility group nucleosome binding domain 5, transcript variant X1
94. RPL31 ENSGALG00000016775 211.00 1856.25 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
95. RAN ENSGALG00000002569 204.40 1798.19 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
96. RPLP2 ENSGALG00000034811 203.08 1786.57 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
97. RPS7 ENSGALG00000016392 203.08 1786.57 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
98. SET ENSGALG00000004701 200.45 1763.44 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
99. HNRNPDL ENSGALG00000023199 199.13 1751.82 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
100. ENSGALG00000028992 ENSGALG00000028992 193.85 1705.37
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA