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Experiment Chicken_E3_embryo, section s20.

Sample reads: 113,758. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3995.12 35121.25
2. MT-ATP6 MT-ATP6 1272.59 11187.39
3. EEF1A EEF1A 1190.65 10467.05
4. MT-ND5 MT-ND5 1182.36 10394.17
5. RPLP0 ENSGALG00000023294 1151.24 10120.59 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. gga-mir-3533 ENSGALG00000027736 1074.49 9445.88 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 1026.78 9026.46 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. CIRBP ENSGALG00000030918 1008.12 8862.42 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
9. RPL23A ENSGALG00000003966 954.18 8388.23 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
10. RPS10 ENSGALG00000002813 891.95 7841.16 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. GAPDH ENSGALG00000014442 795.50 6993.27 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. RPL15 ENSGALG00000011290 741.57 6519.17 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
13. RPS23 ENSGALG00000015617 721.86 6345.90 ribosomal protein S23
14. RPL4 ENSGALG00000007711 707.34 6218.25 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
15. SNRPD1 ENSGALG00000041334 657.56 5780.63 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
16. RPLP1 ENSGALG00000030878 618.14 5434.09 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
17. RPL13 ENSGALG00000006179 595.33 5233.57 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
18. RPS21 ENSGALG00000005338 589.10 5178.80 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
19. MT-CYB MT-CYB 570.44 5014.76
20. PPIA ENSGALG00000028600 569.40 5005.62 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
21. RPS15 ENSGALG00000015195 547.62 4814.15 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
22. MDK ENSGALG00000008367 538.28 4732.04 midkine [Source:NCBI gene;Acc:423196]
23. gga-mir-3527 gga-mir-3527 535.17 4704.70
24. RPL29 ENSGALG00000026978 525.84 4622.68 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
25. RPL27A ENSGALG00000005948 498.87 4385.58 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
26. RPSA 492.65 4330.90 ribosomal protein SA
27. RPS29 ENSGALG00000012229 460.50 4048.27 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
28. RPS2 ENSGALG00000005490 459.46 4039.13 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
29. RPS15A ENSGALG00000006771 449.09 3947.97 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPL27 ENSGALG00000002837 448.05 3938.82 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
31. RPS3A ENSGALG00000010077 448.05 3938.82 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
32. RPL35 ENSGALG00000035677 442.87 3893.29 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
33. GNB2L1 ENSGALG00000000122 438.72 3856.80 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
34. RPL7A ENSGALG00000003197 429.38 3774.70 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
35. RPS11 ENSGALG00000017299 428.35 3765.64 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
36. RPL12 ENSGALG00000008806 425.23 3738.21 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
37. TXN ENSGALG00000015704 424.20 3729.16 thioredoxin [Source:NCBI gene;Acc:396437]
38. RPL19 ENSGALG00000001658 421.09 3701.82 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
39. RPL36 ENSGALG00000000474 419.01 3683.53 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. MT-ND4 MT-ND4 414.86 3647.05
41. RPS8 ENSGALG00000010124 414.86 3647.05 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
42. RPS4 RPS4 406.56 3574.08
43. RPL32 ENSGALG00000027142 376.49 3309.74 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
44. ALDOC ENSGALG00000026077 369.23 3245.91 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
45. NME2 ENSGALG00000002932 365.08 3209.43 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
46. RPS12 ENSGALG00000013990 360.93 3172.95 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
47. RPL18A 359.89 3163.81 ribosomal protein L18a
48. RPS27A ENSGALG00000036790 352.63 3099.98 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
49. LDHB ENSGALG00000035836 342.26 3008.82 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
50. RPL37A ENSGALG00000011472 340.19 2990.62 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
51. ANP32B ENSGALG00000037483 333.96 2935.85 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
52. RPL38 ENSGALG00000001465 332.93 2926.80 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
53. TCEB3 ENSGALG00000034625 331.89 2917.66 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
54. RPS16 ENSGALG00000026490 330.85 2908.51 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. ENSGALG00000028649 ENSGALG00000028649 329.82 2899.46
56. MT-CO1 MT-CO1 322.56 2835.64
57. RPL37 ENSGALG00000014833 319.44 2808.21 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
58. EIF5A2 ENSGALG00000009309 317.37 2790.01 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
59. RPL8 ENSGALG00000016232 317.37 2790.01 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
60. RPS14 ENSGALG00000004588 317.37 2790.01 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
61. RPS28 ENSGALG00000024398 317.37 2790.01 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
62. RPL26 RPL26 316.33 2780.87
63. RPL6 ENSGALG00000004818 311.15 2735.33 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
64. MT-ND3 MT-ND3 308.04 2707.99
65. MT-ND1 MT-ND1 305.96 2689.71
66. PHB2 ENSGALG00000014567 302.85 2662.37 prohibitin 2 [Source:NCBI gene;Acc:771124]
67. RPL14 ENSGALG00000043379 293.52 2580.35 ribosomal protein L14
68. RPL7 ENSGALG00000035252 288.33 2534.72 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
69. ATP5G3 285.22 2507.38 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
70. RPL23 ENSGALG00000001634 282.11 2480.04 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
71. RPL24 ENSGALG00000015339 282.11 2480.04 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
72. RPL21 ENSGALG00000027035 276.92 2434.41 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
73. ENO1 ENSGALG00000002377 272.77 2397.93 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
74. RPS6 ENSGALG00000015082 267.59 2352.39 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
75. HMGN2 HMGN2 263.44 2315.91
76. PRDX1 ENSGALG00000010243 259.29 2279.43 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
77. HMGN5 ENSGALG00000007131 256.18 2252.09 high mobility group nucleosome binding domain 5, transcript variant X1
78. RPL5 ENSGALG00000005922 246.84 2169.98 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
79. EEF1D 245.81 2160.92 eukaryotic translation elongation factor 1 delta, transcript variant X13
80. RPL36AL ENSGALG00000004952 243.73 2142.64 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
81. RPS13 ENSGALG00000006096 242.69 2133.50 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
82. RPS25 ENSGALG00000007699 236.47 2078.82 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
83. ENSGALG00000002696 ENSGALG00000002696 228.17 2005.85
84. RPS7 ENSGALG00000016392 226.10 1987.65 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
85. FKBP4 ENSGALG00000014331 225.06 1978.51 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
86. CRHOA CRHOA 222.99 1960.31
87. TMSB4X ENSGALG00000026383 219.88 1932.97 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
88. RPS20 ENSGALG00000014432 215.73 1896.49 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
89. SLC25A6_1 ENSGALG00000016691 213.65 1878.20 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
90. RAN ENSGALG00000002569 209.51 1841.81 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
91. RPL31 ENSGALG00000016775 201.21 1768.84 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
92. SEC61G ENSGALG00000037863 201.21 1768.84 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
93. SSR1 ENSGALG00000012798 201.21 1768.84 signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
94. HSPA8 ENSGALG00000006512 200.17 1759.70 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
95. STMN1 ENSGALG00000001475 200.17 1759.70 stathmin 1 [Source:NCBI gene;Acc:396057]
96. UBB ENSGALG00000004509 200.17 1759.70 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
97. HNRNPDL ENSGALG00000023199 198.10 1741.50 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
98. RPS17 ENSGALG00000002157 189.80 1668.54 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
99. SET ENSGALG00000004701 188.76 1659.40 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
100. H3-IX H3-IX 187.73 1650.34
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA