Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_embryo, section s17.

Sample reads: 113,761. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4262.57 37471.23
2. MT-ND5 MT-ND5 1211.58 10650.71
3. CIRBP ENSGALG00000030918 1157.89 10178.73 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. RPLP0 ENSGALG00000023294 1039.48 9137.82 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. MT-ATP6 MT-ATP6 1036.73 9113.64
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 988.54 8690.02 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. EEF1A EEF1A 980.28 8617.41
8. RPL15 ENSGALG00000011290 944.49 8302.78 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
9. RPS10 ENSGALG00000002813 885.28 7782.28 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. RPL23A ENSGALG00000003966 879.78 7733.93 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
11. gga-mir-3533 ENSGALG00000027736 874.27 7685.50 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. RPS23 ENSGALG00000015617 801.30 7044.04 ribosomal protein S23
13. GAPDH ENSGALG00000014442 777.89 6838.24 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. RPL13 ENSGALG00000006179 711.81 6257.35 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
15. RPL4 ENSGALG00000007711 707.68 6221.04 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. RPLP1 ENSGALG00000030878 667.75 5870.03 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
17. PPIA ENSGALG00000028600 656.73 5773.16 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
18. SNRPD1 ENSGALG00000041334 652.60 5736.85 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
19. RPS21 ENSGALG00000005338 572.75 5034.91 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
20. RPS15 ENSGALG00000015195 560.36 4925.99 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
21. RPS3A ENSGALG00000010077 560.36 4925.99 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
22. RPL29 ENSGALG00000026978 549.34 4829.12 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
23. RPL35 ENSGALG00000035677 530.07 4659.72 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
24. MDK ENSGALG00000008367 508.04 4466.06 midkine [Source:NCBI gene;Acc:423196]
25. RPSA 503.91 4429.75 ribosomal protein SA
26. RPL27A ENSGALG00000005948 498.40 4381.31 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
27. RPS2 ENSGALG00000005490 490.14 4308.70 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
28. RPS12 ENSGALG00000013990 483.26 4248.22 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
29. MT-ND4 MT-ND4 479.13 4211.92
30. RPL7A ENSGALG00000003197 479.13 4211.92 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. RPS15A ENSGALG00000006771 466.74 4103.00 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. MT-CYB MT-CYB 455.72 4006.12
33. RPL19 ENSGALG00000001658 443.33 3897.21 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
34. RPL38 ENSGALG00000001465 435.07 3824.60 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
35. RPS11 ENSGALG00000017299 430.94 3788.29 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
36. gga-mir-3527 gga-mir-3527 425.43 3739.85
37. RPL36 ENSGALG00000000474 414.42 3643.07 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
38. NME2 ENSGALG00000002932 406.16 3570.45 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
39. RPS29 ENSGALG00000012229 403.40 3546.19 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
40. RPL32 ENSGALG00000027142 395.14 3473.58 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
41. RPS4 RPS4 392.39 3449.41
42. GNB2L1 ENSGALG00000000122 388.26 3413.10 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
43. RPL27 ENSGALG00000002837 388.26 3413.10 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
44. RPL37A ENSGALG00000011472 385.50 3388.84 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
45. TXN ENSGALG00000015704 384.13 3376.79 thioredoxin [Source:NCBI gene;Acc:396437]
46. RPS8 ENSGALG00000010124 381.37 3352.53 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
47. RPL12 ENSGALG00000008806 367.61 3231.57 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. RPL8 ENSGALG00000016232 359.34 3158.87 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
49. RPL26 RPL26 355.21 3122.57
50. RPS16 ENSGALG00000026490 352.46 3098.39 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
51. RPS6 ENSGALG00000015082 352.46 3098.39 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
52. RPL37 ENSGALG00000014833 351.08 3086.26 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
53. RPS28 ENSGALG00000024398 351.08 3086.26 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
54. MT-CO1 MT-CO1 340.07 2989.47
55. RPL6 ENSGALG00000004818 338.69 2977.34 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
56. RPS27A ENSGALG00000036790 330.43 2904.73 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
57. ANP32B ENSGALG00000037483 315.29 2771.64 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
58. EIF5A2 ENSGALG00000009309 315.29 2771.64 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
59. RPL23 ENSGALG00000001634 315.29 2771.64 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
60. MT-ND1 MT-ND1 312.53 2747.38
61. RPL24 ENSGALG00000015339 308.40 2711.07 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
62. TCEB3 ENSGALG00000034625 307.03 2699.03 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. LDHB ENSGALG00000035836 302.90 2662.72 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
64. ENO1 ENSGALG00000002377 294.64 2590.11 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
65. RPL21 ENSGALG00000027035 291.88 2565.85 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
66. RPS14 ENSGALG00000004588 290.50 2553.72 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
67. RPL18A 286.37 2517.41 ribosomal protein L18a
68. TMSB4X ENSGALG00000026383 285.00 2505.37 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
69. PHB2 ENSGALG00000014567 282.24 2481.10 prohibitin 2 [Source:NCBI gene;Acc:771124]
70. HNRNPDL ENSGALG00000023199 276.74 2432.75 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
71. RPL14 ENSGALG00000043379 275.36 2420.62 ribosomal protein L14
72. ATP5G3 272.61 2396.45 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
73. MT-ND3 MT-ND3 264.35 2323.84
74. HMGN5 ENSGALG00000007131 256.08 2251.14 high mobility group nucleosome binding domain 5, transcript variant X1
75. PRDX1 ENSGALG00000010243 256.08 2251.14 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
76. RPL7 ENSGALG00000035252 256.08 2251.14 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
77. RPL36AL ENSGALG00000004952 254.71 2239.09 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
78. ENSGALG00000028649 ENSGALG00000028649 250.58 2202.79
79. HMGN2 HMGN2 247.82 2178.53
80. RPL5 ENSGALG00000005922 246.45 2166.48 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
81. RPS13 ENSGALG00000006096 243.69 2142.22 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
82. RPS20 ENSGALG00000014432 240.94 2118.05 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
83. ALDOC ENSGALG00000026077 236.81 2081.74 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
84. RPS7 ENSGALG00000016392 234.06 2057.57 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
85. HBG1 HBG1 232.68 2045.43
86. RPL31 ENSGALG00000016775 229.93 2021.26 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. RPS17 ENSGALG00000002157 224.42 1972.82 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
88. H3-IX H3-IX 221.66 1948.56
89. HBZ ENSGALG00000023740 221.66 1948.56 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
90. STMN1 ENSGALG00000001475 220.29 1936.52 stathmin 1 [Source:NCBI gene;Acc:396057]
91. EEF1D 217.53 1912.25 eukaryotic translation elongation factor 1 delta, transcript variant X13
92. RAN ENSGALG00000002569 217.53 1912.25 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
93. SEC61G ENSGALG00000037863 212.03 1863.90 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
94. RPS25 ENSGALG00000007699 209.27 1839.64 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
95. SLC25A6_1 ENSGALG00000016691 203.77 1791.29 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
96. SET ENSGALG00000004701 195.51 1718.68 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
97. ENSGALG00000028992 ENSGALG00000028992 194.13 1706.55
98. FKBP4 ENSGALG00000014331 194.13 1706.55 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
99. HSPA8 ENSGALG00000006512 194.13 1706.55 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
100. PKM ENSGALG00000001992 192.75 1694.42 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA