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Experiment Chicken_E3_embryo, section s16.

Sample reads: 113,919. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4012.25 35221.30
2. RPL35A ENSGALG00000007611, ENSGALG00000041230 1167.06 10244.97 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
3. CIRBP ENSGALG00000030918 1123.43 9861.97 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
4. EEF1A EEF1A 1100.06 9656.81
5. RPLP0 ENSGALG00000023294 1072.01 9410.58 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. MT-ATP6 MT-ATP6 1047.08 9191.73
7. RPL23A ENSGALG00000003966 976.96 8576.19 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
8. gga-mir-3533 ENSGALG00000027736 905.29 7947.04 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. RPL15 ENSGALG00000011290 903.73 7933.34 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
10. RPS10 ENSGALG00000002813 855.43 7509.34 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. RPS23 ENSGALG00000015617 800.89 7030.57 ribosomal protein S23
12. GAPDH ENSGALG00000014442 735.45 6456.11 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. RPL4 ENSGALG00000007711 732.33 6428.72 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. RPL13 ENSGALG00000006179 729.22 6401.42 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
15. RPLP1 ENSGALG00000030878 721.43 6333.03 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
16. RPL29 ENSGALG00000026978 657.54 5772.18 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
17. RPS21 ENSGALG00000005338 649.75 5703.79 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
18. RPS15 ENSGALG00000015195 627.94 5512.33 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
19. SNRPD1 ENSGALG00000041334 626.38 5498.64 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
20. MT-ND5 MT-ND5 617.03 5416.56
21. RPS2 ENSGALG00000005490 604.56 5307.09 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
22. RPL27A ENSGALG00000005948 579.63 5088.25 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
23. RPL35 ENSGALG00000035677 554.70 4869.40 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
24. RPS12 ENSGALG00000013990 550.03 4828.41 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
25. MDK ENSGALG00000008367 545.35 4787.32 midkine [Source:NCBI gene;Acc:423196]
26. RPS15A ENSGALG00000006771 534.45 4691.64 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
27. PPIA ENSGALG00000028600 532.89 4677.94 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
28. RPS28 ENSGALG00000024398 490.82 4308.63 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
29. RPSA 486.14 4267.55 ribosomal protein SA
30. RPS29 ENSGALG00000012229 478.35 4199.17 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
31. RPL27 ENSGALG00000002837 465.89 4089.79 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
32. RPL26 RPL26 461.21 4048.71
33. RPL38 ENSGALG00000001465 458.10 4021.40 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
34. RPL19 ENSGALG00000001658 454.98 3994.02 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. RPL7A ENSGALG00000003197 454.98 3994.02 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. RPL37A ENSGALG00000011472 451.86 3966.63 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
37. RPL8 ENSGALG00000016232 436.28 3829.86 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
38. RPS8 ENSGALG00000010124 430.05 3775.17 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
39. NME2 ENSGALG00000002932 425.38 3734.17 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
40. RPL36 ENSGALG00000000474 422.26 3706.78 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
41. RPL6 ENSGALG00000004818 419.14 3679.40 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
42. GNB2L1 ENSGALG00000000122 414.47 3638.40 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
43. RPS3A ENSGALG00000010077 409.79 3597.32 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
44. MT-ND4 MT-ND4 408.24 3583.71
45. TXN ENSGALG00000015704 405.12 3556.32 thioredoxin [Source:NCBI gene;Acc:396437]
46. RPS11 ENSGALG00000017299 403.56 3542.63 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
47. RPS4 RPS4 400.45 3515.33
48. RPS6 ENSGALG00000015082 398.89 3501.63 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
49. MT-CYB MT-CYB 397.33 3487.94
50. RPS27A ENSGALG00000036790 387.98 3405.86 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. RPL12 ENSGALG00000008806 384.86 3378.47 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
52. RPL32 ENSGALG00000027142 367.72 3228.01 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
53. RPS14 ENSGALG00000004588 364.61 3200.71 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
54. RPL37 ENSGALG00000014833 359.93 3159.62 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
55. RPS16 ENSGALG00000026490 349.03 3063.94 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
56. RPL18A 342.79 3009.16 ribosomal protein L18a
57. ANP32B ENSGALG00000037483 341.24 2995.56 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
58. TCEB3 ENSGALG00000034625 341.24 2995.56 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
59. HMGN5 ENSGALG00000007131 330.33 2899.78 high mobility group nucleosome binding domain 5, transcript variant X1
60. RPL23 ENSGALG00000001634 327.21 2872.39 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
61. EIF5A2 ENSGALG00000009309 319.42 2804.01 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
62. TMSB4X ENSGALG00000026383 317.86 2790.32 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
63. gga-mir-3527 gga-mir-3527 314.75 2763.01
64. LDHB ENSGALG00000035836 300.72 2639.85 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
65. RPL24 ENSGALG00000015339 297.61 2612.55 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
66. RPL7 ENSGALG00000035252 291.37 2557.77 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
67. HBZ ENSGALG00000023740 288.26 2530.47 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
68. RPL21 ENSGALG00000027035 288.26 2530.47 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
69. ENO1 ENSGALG00000002377 285.14 2503.08 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
70. RPL14 ENSGALG00000043379 283.58 2489.39 ribosomal protein L14
71. ALDOC ENSGALG00000026077 280.47 2462.09 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
72. PHB2 ENSGALG00000014567 280.47 2462.09 prohibitin 2 [Source:NCBI gene;Acc:771124]
73. MT-ND3 MT-ND3 278.91 2448.40
74. RAN ENSGALG00000002569 277.35 2434.70 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
75. ATP5G3 274.24 2407.40 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
76. RPS17 ENSGALG00000002157 269.56 2366.32 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
77. RPL36AL ENSGALG00000004952 268.00 2352.62 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
78. ENSGALG00000002696 ENSGALG00000002696 266.44 2338.93
79. RPL31 ENSGALG00000016775 264.89 2325.32 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
80. MT-CO1 MT-CO1 263.33 2311.63
81. RPS13 ENSGALG00000006096 261.77 2297.93 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
82. RPS20 ENSGALG00000014432 261.77 2297.93 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
83. RPS7 ENSGALG00000016392 253.98 2229.55 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
84. ENSGALG00000028649 ENSGALG00000028649 252.42 2215.85
85. PRDX1 ENSGALG00000010243 247.75 2174.86 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
86. HBG1 HBG1 244.63 2147.47
87. RPS25 ENSGALG00000007699 235.28 2065.39 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
88. CRHOA CRHOA 233.72 2051.70
89. RPL5 ENSGALG00000005922 232.16 2038.00 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
90. SEC61G ENSGALG00000037863 232.16 2038.00 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
91. EEF1D 229.05 2010.70 eukaryotic translation elongation factor 1 delta, transcript variant X13
92. HNRNPDL ENSGALG00000023199 219.70 1928.62 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
93. SLC25A6_1 ENSGALG00000016691 219.70 1928.62 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
94. RPL10A ENSGALG00000002644 216.58 1901.23 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
95. HMGN2 HMGN2 215.03 1887.63
96. H3-IX H3-IX 210.35 1846.55
97. SET ENSGALG00000004701 202.56 1778.16 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
98. EIF4G2 ENSGALG00000005587 201.00 1764.47 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
99. FKBP4 ENSGALG00000014331 201.00 1764.47 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
100. STMN1 ENSGALG00000001475 201.00 1764.47 stathmin 1 [Source:NCBI gene;Acc:396057]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA