Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s9.

Sample reads: 236,214. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5731.00 24264.06
2. RPLP0 ENSGALG00000023294 2898.00 12269.63 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. RPS10 ENSGALG00000002813 2468.00 10449.08 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
4. gga-mir-3533 ENSGALG00000027736 2434.00 10305.13 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. gga-mir-3527 gga-mir-3527 2187.00 9259.38
6. EEF1A EEF1A 2166.00 9170.47
7. RPS29 ENSGALG00000012229 2164.00 9162.00 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. RPL4 ENSGALG00000007711 2142.00 9068.85 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
9. RPL35A ENSGALG00000007611, ENSGALG00000041230 2105.00 8912.20 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
10. RPL13 ENSGALG00000006179 2024.00 8569.26 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
11. RPS15 ENSGALG00000015195 1953.00 8268.66 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
12. GAPDH ENSGALG00000014442 1887.00 7989.23 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. RPS2 ENSGALG00000005490 1820.00 7705.56 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
14. MT-ATP6 MT-ATP6 1764.00 7468.47
15. RPL23A ENSGALG00000003966 1686.00 7138.23 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
16. RPL35 ENSGALG00000035677 1680.00 7112.83 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
17. MT-ND1 MT-ND1 1596.00 6757.19
18. RPSA 1451.00 6143.28 ribosomal protein SA
19. RPS4 RPS4 1424.00 6028.97
20. RPL15 ENSGALG00000011290 1391.00 5889.25 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
21. RPS8 ENSGALG00000010124 1363.00 5770.70 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. RPL24 ENSGALG00000015339 1339.00 5669.09 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
23. RPL6 ENSGALG00000004818 1284.00 5436.23 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
24. MT-ND3 MT-ND3 1266.00 5360.02
25. RPS14 ENSGALG00000004588 1262.00 5343.09 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
26. RPS15A ENSGALG00000006771 1241.00 5254.18 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
27. RPL32 ENSGALG00000027142 1217.00 5152.57 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
28. RPLP1 ENSGALG00000030878 1211.00 5127.16 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
29. MT-ND5 MT-ND5 1167.00 4940.87
30. RPL18A 1137.00 4813.86 ribosomal protein L18a
31. RPL7A ENSGALG00000003197 1113.00 4712.25 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPL19 ENSGALG00000001658 1110.00 4699.55 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
33. RPL27A ENSGALG00000005948 1093.00 4627.57 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
34. SNRPD1 ENSGALG00000041334 1076.00 4555.60 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
35. MT-ND4 MT-ND4 1073.00 4542.90
36. RPS21 ENSGALG00000005338 1055.00 4466.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. RPL29 ENSGALG00000026978 1040.00 4403.18 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
38. RPL12 ENSGALG00000008806 1034.00 4377.78 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
39. RPL36 ENSGALG00000000474 1000.00 4233.83 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. HBZ ENSGALG00000023740 985.00 4170.32 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
41. PPIA ENSGALG00000028600 968.00 4098.34 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
42. RPS23 ENSGALG00000015617 961.00 4068.71 ribosomal protein S23
43. RPL7 ENSGALG00000035252 931.00 3941.69 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
44. RPS28 ENSGALG00000024398 913.00 3865.48 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
45. GNB2L1 ENSGALG00000000122 906.00 3835.85 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
46. RPL27 ENSGALG00000002837 893.00 3780.81 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
47. RPL38 ENSGALG00000001465 885.00 3746.94 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
48. RPL26 RPL26 879.00 3721.53
49. RPS12 ENSGALG00000013990 879.00 3721.53 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
50. RPS27A ENSGALG00000036790 859.00 3636.86 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. CIRBP ENSGALG00000030918 848.00 3590.28 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
52. RPL14 ENSGALG00000043379 844.00 3573.35 ribosomal protein L14
53. RPS16 ENSGALG00000026490 841.00 3560.65 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
54. RPS7 ENSGALG00000016392 828.00 3505.61 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. RPS3A ENSGALG00000010077 818.00 3463.27 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
56. MT-CYB MT-CYB 815.00 3450.57
57. ANP32B ENSGALG00000037483 809.00 3425.17 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
58. NME2 ENSGALG00000002932 787.00 3332.02 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
59. RPL8 ENSGALG00000016232 767.00 3247.34 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
60. RPS13 ENSGALG00000006096 766.00 3243.11 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
61. TCEB3 ENSGALG00000034625 755.00 3196.54 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
62. RPL36AL ENSGALG00000004952 745.00 3154.20 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
63. MDK ENSGALG00000008367 735.00 3111.86 midkine [Source:NCBI gene;Acc:423196]
64. RPL21 ENSGALG00000027035 724.00 3065.29 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
65. RPS11 ENSGALG00000017299 719.00 3044.12 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
66. RPL5 ENSGALG00000005922 715.00 3027.19 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
67. HBG1 HBG1 687.00 2908.64
68. ENO1 ENSGALG00000002377 629.00 2663.08 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
69. RPS24 ENSGALG00000004871 625.00 2646.14 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
70. PRDX1 ENSGALG00000010243 623.00 2637.67 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
71. LDHB ENSGALG00000035836 612.00 2591.10 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
72. MT-CO1 MT-CO1 607.00 2569.93
73. RPL10A ENSGALG00000002644 601.00 2544.53 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
74. RPL37A ENSGALG00000011472 594.00 2514.89 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
75. RPL23 ENSGALG00000001634 586.00 2481.02 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
76. STMN1 ENSGALG00000001475 585.00 2476.79 stathmin 1 [Source:NCBI gene;Acc:396057]
77. TMSB4X ENSGALG00000026383 581.00 2459.85 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
78. UBB ENSGALG00000004509 579.00 2451.39 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
79. RPS17 ENSGALG00000002157 575.00 2434.45 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
80. EIF5A2 ENSGALG00000009309 560.00 2370.94 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
81. RPS25 ENSGALG00000007699 560.00 2370.94 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. RPS3 ENSGALG00000017330 560.00 2370.94 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
83. EEF1D 559.00 2366.71 eukaryotic translation elongation factor 1 delta, transcript variant X13
84. ATP5G3 531.00 2248.16 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
85. HMGN2 HMGN2 531.00 2248.16
86. RPS6 ENSGALG00000015082 507.00 2146.55 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
87. HBE 499.00 2112.68 hemoglobin subunit epsilon
88. ENSGALG00000028992 ENSGALG00000028992 488.00 2066.11
89. RPS20 ENSGALG00000014432 473.00 2002.60 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
90. PKM ENSGALG00000001992 468.00 1981.43 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
91. RPL31 ENSGALG00000016775 458.00 1939.09 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
92. ALDOC ENSGALG00000026077 452.00 1913.69 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
93. ENSGALG00000028649 ENSGALG00000028649 444.00 1879.82
94. CRHOA CRHOA 439.00 1858.65
95. RPL37 ENSGALG00000014833 399.00 1689.30 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
96. RAN ENSGALG00000002569 394.00 1668.13 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
97. CHCHD2 ENSGALG00000002495 387.00 1638.49 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
98. FTH FTH 385.00 1630.02
99. SLC25A6_1 ENSGALG00000016691 379.00 1604.62 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
100. FKBP12 FKBP12 365.00 1545.35
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA