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Experiment Chicken_E3_aorta, section s83.

Sample reads: 235,853. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6922.00 29350.78
2. HBZ ENSGALG00000023740 5288.00 22422.27 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
3. HBG1 HBG1 4348.00 18436.46
4. RPLP0 ENSGALG00000023294 3163.00 13411.81 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. HBE 2938.00 12457.76 hemoglobin subunit epsilon
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 2600.00 11024.56 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS29 ENSGALG00000012229 2508.00 10634.46 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. RPS10 ENSGALG00000002813 2507.00 10630.22 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPS15 ENSGALG00000015195 2445.00 10367.33 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
10. gga-mir-3527 gga-mir-3527 2173.00 9213.99
11. gga-mir-3533 ENSGALG00000027736 2130.00 9031.66 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. GAPDH ENSGALG00000014442 1855.00 7865.60 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. RPL4 ENSGALG00000007711 1834.00 7776.56 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. EEF1A EEF1A 1725.00 7314.37
15. MT-ATP6 MT-ATP6 1678.00 7115.08
16. RPL13 ENSGALG00000006179 1672.00 7089.64 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
17. RPS28 ENSGALG00000024398 1645.00 6975.16 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
18. RPS2 ENSGALG00000005490 1626.00 6894.59 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
19. RPS4 RPS4 1592.00 6750.43
20. RPL23A ENSGALG00000003966 1559.00 6610.50 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
21. RPS8 ENSGALG00000010124 1508.00 6394.25 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. PPIA ENSGALG00000028600 1440.00 6105.91 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
23. RPSA 1425.00 6042.31 ribosomal protein SA
24. MT-ND6 MT-ND6 1421.00 6025.35
25. MT-ND5 MT-ND5 1408.00 5970.23
26. RPLP1 ENSGALG00000030878 1399.00 5932.06 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
27. RPS21 ENSGALG00000005338 1347.00 5711.57 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
28. RPL15 ENSGALG00000011290 1311.00 5558.92 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
29. RPL19 ENSGALG00000001658 1253.00 5312.99 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
30. RPL24 ENSGALG00000015339 1250.00 5300.27 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
31. MT-ND1 MT-ND1 1229.00 5211.23
32. RPL35 ENSGALG00000035677 1225.00 5194.27 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
33. RPL29 ENSGALG00000026978 1223.00 5185.79 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
34. MT-ND3 MT-ND3 1205.00 5109.46
35. RPS14 ENSGALG00000004588 1201.00 5092.50 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
36. RPL27A ENSGALG00000005948 1190.00 5045.86 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPS15A ENSGALG00000006771 1175.00 4982.25 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPL7A ENSGALG00000003197 1123.00 4761.76 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
39. RPL36 ENSGALG00000000474 1117.00 4736.32 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. RPL6 ENSGALG00000004818 1116.00 4732.08 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
41. RPL27 ENSGALG00000002837 1094.00 4638.80 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
42. RPS12 ENSGALG00000013990 1070.00 4537.03 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
43. RPL12 ENSGALG00000008806 1035.00 4388.62 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
44. RPL18A 1029.00 4363.18 ribosomal protein L18a
45. RPL32 ENSGALG00000027142 1026.00 4350.46 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
46. RPL26 RPL26 1006.00 4265.66
47. RPS23 ENSGALG00000015617 981.00 4159.65 ribosomal protein S23
48. RPL38 ENSGALG00000001465 977.00 4142.69 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
49. RPS16 ENSGALG00000026490 927.00 3930.68 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. RPS7 ENSGALG00000016392 887.00 3761.07 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. RPS11 ENSGALG00000017299 878.00 3722.91 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
52. RPL7 ENSGALG00000035252 871.00 3693.23 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
53. SNRPD1 ENSGALG00000041334 867.00 3676.27 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
54. RPL8 ENSGALG00000016232 829.00 3515.14 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
55. MT-ND4 MT-ND4 826.00 3502.42
56. RPL37A ENSGALG00000011472 810.00 3434.58 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
57. GNB2L1 ENSGALG00000000122 791.00 3354.01 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
58. RPL36AL ENSGALG00000004952 780.00 3307.37 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
59. RPL21 ENSGALG00000027035 768.00 3256.49 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
60. MDK ENSGALG00000008367 763.00 3235.29 midkine [Source:NCBI gene;Acc:423196]
61. ANP32B ENSGALG00000037483 734.00 3112.32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
62. MT-CYB MT-CYB 733.00 3108.08
63. RPS25 ENSGALG00000007699 730.00 3095.36 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
64. RPL14 ENSGALG00000043379 724.00 3069.92 ribosomal protein L14
65. RPS27A ENSGALG00000036790 713.00 3023.27 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
66. RPS3A ENSGALG00000010077 702.00 2976.63 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
67. TMSB4X ENSGALG00000026383 695.00 2946.95 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
68. NME2 ENSGALG00000002932 676.00 2866.39 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
69. RPS24 ENSGALG00000004871 666.00 2823.98 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
70. RPL5 ENSGALG00000005922 662.00 2807.02 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
71. TCEB3 ENSGALG00000034625 659.00 2794.30 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. CIRBP ENSGALG00000030918 656.00 2781.58 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
73. RPS17 ENSGALG00000002157 646.00 2739.18 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
74. PRDX1 ENSGALG00000010243 632.00 2679.82 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
75. MT-CO1 MT-CO1 630.00 2671.34
76. RPS6 ENSGALG00000015082 617.00 2616.21 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
77. RPL10A ENSGALG00000002644 614.00 2603.49 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
78. RPL23 ENSGALG00000001634 586.00 2484.77 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
79. RPS3 ENSGALG00000017330 584.00 2476.29 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
80. ENSGALG00000028992 ENSGALG00000028992 566.00 2399.96
81. ENSGALG00000028649 ENSGALG00000028649 559.00 2370.28
82. EEF1D 558.00 2366.04 eukaryotic translation elongation factor 1 delta, transcript variant X13
83. RPS13 ENSGALG00000006096 558.00 2366.04 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
84. ENO1 ENSGALG00000002377 553.00 2344.84 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
85. RPS20 ENSGALG00000014432 528.00 2238.83 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
86. UBB ENSGALG00000004509 523.00 2217.63 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
87. ALDOC ENSGALG00000026077 515.00 2183.71 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
88. ENSGALG00000018384 ENSGALG00000018384 511.00 2166.75
89. RPL37 ENSGALG00000014833 508.00 2154.03 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
90. FTH FTH 505.00 2141.31
91. STMN1 ENSGALG00000001475 493.00 2090.43 stathmin 1 [Source:NCBI gene;Acc:396057]
92. EIF5A2 ENSGALG00000009309 454.00 1925.06 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
93. ZNF593 ENSGALG00000000542 448.00 1899.62 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
94. HMGN2 HMGN2 441.00 1869.94
95. PKM ENSGALG00000001992 416.00 1763.93 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
96. ATP5G3 386.00 1636.72 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
97. LDHB ENSGALG00000035836 385.00 1632.48 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
98. RPL31 ENSGALG00000016775 385.00 1632.48 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
99. RPL22 ENSGALG00000000719 384.00 1628.24 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
100. ENSGALG00000022570 ENSGALG00000022570 366.00 1551.92
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA