Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s76.

Sample reads: 235,042. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 9129.00 38844.66 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. HBG1 HBG1 8485.00 36104.39
3. MT-CO3 MT-CO3 5824.00 24781.61
4. HBE 5572.00 23709.33 hemoglobin subunit epsilon
5. RPLP0 ENSGALG00000023294 2880.00 12254.64 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 2574.00 10952.59 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS29 ENSGALG00000012229 2552.00 10858.97 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. RPS15 ENSGALG00000015195 2437.00 10369.64 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
9. RPS10 ENSGALG00000002813 2310.00 9829.24 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. gga-mir-3533 ENSGALG00000027736 2291.00 9748.40 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. gga-mir-3527 gga-mir-3527 2024.00 8612.29
12. RPL4 ENSGALG00000007711 1862.00 7922.97 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. RPS28 ENSGALG00000024398 1790.00 7616.60 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
14. MT-ATP6 MT-ATP6 1743.00 7416.61
15. GAPDH ENSGALG00000014442 1737.00 7391.08 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. EEF1A EEF1A 1665.00 7084.71
17. RPS2 ENSGALG00000005490 1623.00 6906.00 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
18. RPL13 ENSGALG00000006179 1603.00 6820.90 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPL23A ENSGALG00000003966 1597.00 6795.37 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
20. RPS8 ENSGALG00000010124 1488.00 6331.56 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPL15 ENSGALG00000011290 1421.00 6046.47 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. RPS4 RPS4 1412.00 6008.18
23. RPS21 ENSGALG00000005338 1345.00 5723.09 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
24. RPLP1 ENSGALG00000030878 1336.00 5684.79 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. MT-ND5 MT-ND5 1284.00 5463.53
26. RPL27A ENSGALG00000005948 1267.00 5391.19 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
27. PPIA ENSGALG00000028600 1255.00 5340.13 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
28. RPS14 ENSGALG00000004588 1244.00 5293.32 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
29. RPL19 ENSGALG00000001658 1224.00 5208.22 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
30. RPSA 1217.00 5178.44 ribosomal protein SA
31. RPL24 ENSGALG00000015339 1208.00 5140.14 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
32. RPS15A ENSGALG00000006771 1188.00 5055.04 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
33. RPL35 ENSGALG00000035677 1172.00 4986.96 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
34. MT-ND6 MT-ND6 1160.00 4935.90
35. RPL29 ENSGALG00000026978 1159.00 4931.64 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
36. RPL38 ENSGALG00000001465 1145.00 4872.07 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
37. RPL7A ENSGALG00000003197 1128.00 4799.73 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
38. MT-ND1 MT-ND1 1112.00 4731.65
39. RPL18A 995.00 4233.81 ribosomal protein L18a
40. RPL36 ENSGALG00000000474 980.00 4169.98 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
41. RPL26 RPL26 966.00 4110.41
42. MT-ND3 MT-ND3 959.00 4080.63
43. RPL32 ENSGALG00000027142 943.00 4012.54 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
44. RPL6 ENSGALG00000004818 925.00 3935.95 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
45. RPS12 ENSGALG00000013990 925.00 3935.95 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
46. RPL27 ENSGALG00000002837 896.00 3812.56 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
47. RPS7 ENSGALG00000016392 889.00 3782.77 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
48. RPS16 ENSGALG00000026490 884.00 3761.49 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
49. RPL12 ENSGALG00000008806 868.00 3693.41 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
50. RPS23 ENSGALG00000015617 853.00 3629.59 ribosomal protein S23
51. MDK ENSGALG00000008367 834.00 3548.74 midkine [Source:NCBI gene;Acc:423196]
52. MT-ND4 MT-ND4 825.00 3510.44
53. RPL8 ENSGALG00000016232 821.00 3493.42 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
54. RPS11 ENSGALG00000017299 817.00 3476.40 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
55. RPS3A ENSGALG00000010077 794.00 3378.54 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
56. RPS27A ENSGALG00000036790 787.00 3348.75 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
57. SNRPD1 ENSGALG00000041334 750.00 3191.31 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
58. RPL7 ENSGALG00000035252 744.00 3165.78 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
59. RPL36AL ENSGALG00000004952 743.00 3161.53 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
60. FTH FTH 736.00 3131.74
61. RPS25 ENSGALG00000007699 731.00 3110.47 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
62. RPL14 ENSGALG00000043379 716.00 3046.64 ribosomal protein L14
63. NME2 ENSGALG00000002932 715.00 3042.38 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
64. RPL21 ENSGALG00000027035 691.00 2940.26 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
65. TMSB4X ENSGALG00000026383 681.00 2897.71 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
66. MT-CYB MT-CYB 671.00 2855.16
67. GNB2L1 ENSGALG00000000122 653.00 2778.57 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
68. RPL37A ENSGALG00000011472 638.00 2714.74 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
69. RPS17 ENSGALG00000002157 630.00 2680.70 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
70. RPS24 ENSGALG00000004871 621.00 2642.41 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
71. RPL5 ENSGALG00000005922 619.00 2633.90 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
72. TCEB3 ENSGALG00000034625 616.00 2621.13 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
73. ENSGALG00000028992 ENSGALG00000028992 610.00 2595.60
74. RPS3 ENSGALG00000017330 606.00 2578.58 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
75. RPL10A ENSGALG00000002644 605.00 2574.33 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
76. UBB ENSGALG00000004509 588.00 2501.99 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
77. ANP32B ENSGALG00000037483 556.00 2365.83 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
78. MT-CO1 MT-CO1 548.00 2331.79
79. RPS13 ENSGALG00000006096 543.00 2310.51 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
80. PRDX1 ENSGALG00000010243 540.00 2297.75 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
81. ENSGALG00000028649 ENSGALG00000028649 537.00 2284.98
82. RPL37 ENSGALG00000014833 527.00 2242.43 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
83. ENSGALG00000018384 ENSGALG00000018384 516.00 2195.62
84. RPL23 ENSGALG00000001634 515.00 2191.37 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
85. RPS6 ENSGALG00000015082 497.00 2114.78 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
86. CIRBP ENSGALG00000030918 492.00 2093.50 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
87. EEF1D 472.00 2008.40 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. RPS20 ENSGALG00000014432 469.00 1995.63 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
89. STMN1 ENSGALG00000001475 456.00 1940.32 stathmin 1 [Source:NCBI gene;Acc:396057]
90. ALDOC ENSGALG00000026077 454.00 1931.81 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
91. ENO1 ENSGALG00000002377 447.00 1902.02 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
92. ATP5G3 423.00 1799.90 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
93. HMGN5 ENSGALG00000007131 399.00 1697.78 high mobility group nucleosome binding domain 5, transcript variant X1
94. EIF5A2 ENSGALG00000009309 396.00 1685.01 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
95. LDHB ENSGALG00000035836 380.00 1616.93 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
96. RPL31 ENSGALG00000016775 377.00 1604.17 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
97. HMGN2 HMGN2 375.00 1595.66
98. ENSGALG00000022570 ENSGALG00000022570 373.00 1587.15
99. CHCHD2 ENSGALG00000002495 362.00 1540.34 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
100. CRHOA CRHOA 356.00 1514.81
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA