Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s71.

Sample reads: 235,444. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 8091.00 34368.51 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. HBG1 HBG1 6873.00 29194.75
3. MT-CO3 MT-CO3 6106.00 25936.73
4. HBE 5251.00 22304.91 hemoglobin subunit epsilon
5. RPLP0 ENSGALG00000023294 3081.00 13087.30 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. gga-mir-3527 gga-mir-3527 2409.00 10232.82
7. RPS29 ENSGALG00000012229 2399.00 10190.34 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. MT-ATP6 MT-ATP6 2243.00 9527.69
9. gga-mir-3533 ENSGALG00000027736 2231.00 9476.72 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. RPS15 ENSGALG00000015195 2217.00 9417.25 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
11. RPS10 ENSGALG00000002813 2117.00 8992.48 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
12. RPL35A ENSGALG00000007611, ENSGALG00000041230 1994.00 8470.00 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
13. RPL4 ENSGALG00000007711 1737.00 7378.33 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. EEF1A EEF1A 1669.00 7089.49
15. MT-ND5 MT-ND5 1641.00 6970.55
16. RPS8 ENSGALG00000010124 1527.00 6486.31 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
17. GAPDH ENSGALG00000014442 1526.00 6482.06 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPS28 ENSGALG00000024398 1506.00 6397.10 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
19. RPS2 ENSGALG00000005490 1455.00 6180.47 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
20. RPL23A ENSGALG00000003966 1451.00 6163.48 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
21. MT-ND6 MT-ND6 1420.00 6031.80
22. MT-ND1 MT-ND1 1414.00 6006.31
23. RPL13 ENSGALG00000006179 1365.00 5798.17 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
24. RPL15 ENSGALG00000011290 1353.00 5747.20 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
25. PPIA ENSGALG00000028600 1350.00 5734.46 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
26. RPLP1 ENSGALG00000030878 1310.00 5564.55 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
27. RPSA 1300.00 5522.07 ribosomal protein SA
28. RPS21 ENSGALG00000005338 1191.00 5059.06 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. MT-ND3 MT-ND3 1188.00 5046.32
30. RPL24 ENSGALG00000015339 1188.00 5046.32 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
31. RPS14 ENSGALG00000004588 1137.00 4829.69 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
32. RPL35 ENSGALG00000035677 1110.00 4715.00 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
33. RPL29 ENSGALG00000026978 1104.00 4689.51 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
34. RPL19 ENSGALG00000001658 1085.00 4608.80 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. RPL27A ENSGALG00000005948 1075.00 4566.33 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
36. RPS4 RPS4 1067.00 4532.34
37. MT-ND4 MT-ND4 1059.00 4498.36
38. RPL38 ENSGALG00000001465 1053.00 4472.88 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
39. RPL32 ENSGALG00000027142 1043.00 4430.40 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
40. RPL7A ENSGALG00000003197 1042.00 4426.15 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
41. RPL18A 1037.00 4404.91 ribosomal protein L18a
42. MT-CYB MT-CYB 1001.00 4251.99
43. RPS15A ENSGALG00000006771 984.00 4179.78 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
44. RPL8 ENSGALG00000016232 974.00 4137.30 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
45. RPL36 ENSGALG00000000474 967.00 4107.57 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
46. MDK ENSGALG00000008367 947.00 4022.61 midkine [Source:NCBI gene;Acc:423196]
47. RPL26 RPL26 940.00 3992.88
48. RPL12 ENSGALG00000008806 937.00 3980.14 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
49. RPL27 ENSGALG00000002837 880.00 3738.02 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
50. RPS16 ENSGALG00000026490 858.00 3644.57 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
51. RPS12 ENSGALG00000013990 844.00 3585.10 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
52. GNB2L1 ENSGALG00000000122 831.00 3529.88 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
53. RPS7 ENSGALG00000016392 826.00 3508.64 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. RPL6 ENSGALG00000004818 814.00 3457.66 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
55. SNRPD1 ENSGALG00000041334 807.00 3427.93 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
56. RPS23 ENSGALG00000015617 775.00 3292.00 ribosomal protein S23
57. RPL7 ENSGALG00000035252 765.00 3249.53 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
58. RPS11 ENSGALG00000017299 762.00 3236.78 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
59. RPL14 ENSGALG00000043379 749.00 3181.56 ribosomal protein L14
60. NME2 ENSGALG00000002932 746.00 3168.82 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
61. RPS27A ENSGALG00000036790 737.00 3130.59 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
62. RPL21 ENSGALG00000027035 728.00 3092.36 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
63. RPS3A ENSGALG00000010077 725.00 3079.62 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
64. MT-CO1 MT-CO1 722.00 3066.87
65. RPL36AL ENSGALG00000004952 719.00 3054.13 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
66. ENSGALG00000018384 ENSGALG00000018384 715.00 3037.14
67. FTH FTH 705.00 2994.66
68. ANP32B ENSGALG00000037483 690.00 2930.94 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
69. RPS25 ENSGALG00000007699 687.00 2918.20 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
70. UBB ENSGALG00000004509 666.00 2829.00 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
71. RPL10A ENSGALG00000002644 626.00 2659.09 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
72. RPL5 ENSGALG00000005922 625.00 2654.84 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
73. TCEB3 ENSGALG00000034625 618.00 2625.11 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
74. PRDX1 ENSGALG00000010243 598.00 2540.15 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
75. RPS17 ENSGALG00000002157 594.00 2523.16 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. RPS3 ENSGALG00000017330 577.00 2450.95 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
77. STMN1 ENSGALG00000001475 572.00 2429.71 stathmin 1 [Source:NCBI gene;Acc:396057]
78. RPS24 ENSGALG00000004871 570.00 2421.21 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
79. TMSB4X ENSGALG00000026383 562.00 2387.23 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
80. ENSGALG00000028649 ENSGALG00000028649 550.00 2336.26
81. ENSGALG00000028992 ENSGALG00000028992 546.00 2319.27
82. ALDOC ENSGALG00000026077 525.00 2230.07 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
83. RPS20 ENSGALG00000014432 518.00 2200.33 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
84. RPS6 ENSGALG00000015082 517.00 2196.08 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
85. RPS13 ENSGALG00000006096 514.00 2183.34 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
86. RPL37A ENSGALG00000011472 508.00 2157.85 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
87. RPL23 ENSGALG00000001634 499.00 2119.63 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
88. CIRBP ENSGALG00000030918 496.00 2106.88 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
89. EEF1D 490.00 2081.40 eukaryotic translation elongation factor 1 delta, transcript variant X13
90. RPL37 ENSGALG00000014833 440.00 1869.01 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
91. HMGN2 HMGN2 437.00 1856.26
92. EIF5A2 ENSGALG00000009309 426.00 1809.54 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
93. ENO1 ENSGALG00000002377 422.00 1792.55 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
94. MMP15 ENSGALG00000038758 413.00 1754.32 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
95. LDHB ENSGALG00000035836 400.00 1699.10 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
96. CRHOA CRHOA 398.00 1690.60
97. ENSGALG00000022570 ENSGALG00000022570 395.00 1677.86
98. ATP5G3 393.00 1669.36 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
99. ZNF593 ENSGALG00000000542 386.00 1639.63 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
100. RPL22 ENSGALG00000000719 354.00 1503.70 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA