Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s62.

Sample reads: 235,639. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 7340.00 31151.46 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. MT-CO3 MT-CO3 6873.00 29169.48
3. HBG1 HBG1 5937.00 25197.03
4. HBE 4163.00 17668.05 hemoglobin subunit epsilon
5. RPLP0 ENSGALG00000023294 2849.00 12091.35 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. gga-mir-3533 ENSGALG00000027736 2612.00 11085.51 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 2492.00 10576.22 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS10 ENSGALG00000002813 2395.00 10164.54 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. gga-mir-3527 gga-mir-3527 2257.00 9578.86
10. RPL4 ENSGALG00000007711 2185.00 9273.29 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
11. RPS15 ENSGALG00000015195 2125.00 9018.64 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
12. RPS29 ENSGALG00000012229 2058.00 8734.29 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
13. MT-ATP6 MT-ATP6 1755.00 7448.34
14. EEF1A EEF1A 1732.00 7350.73
15. GAPDH ENSGALG00000014442 1673.00 7100.33 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. RPL13 ENSGALG00000006179 1662.00 7053.64 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
17. RPS2 ENSGALG00000005490 1624.00 6892.37 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
18. RPL23A ENSGALG00000003966 1586.00 6731.09 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
19. RPS28 ENSGALG00000024398 1506.00 6391.57 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
20. MT-ND5 MT-ND5 1499.00 6361.86
21. RPS8 ENSGALG00000010124 1485.00 6302.44 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. RPS4 RPS4 1398.00 5933.21
23. RPSA 1377.00 5844.08 ribosomal protein SA
24. MT-ND1 MT-ND1 1333.00 5657.34
25. RPLP1 ENSGALG00000030878 1325.00 5623.39 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
26. RPL15 ENSGALG00000011290 1285.00 5453.63 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
27. MT-ND3 MT-ND3 1238.00 5254.16
28. RPL19 ENSGALG00000001658 1235.00 5241.42 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
29. RPS15A ENSGALG00000006771 1185.00 5029.22 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPS21 ENSGALG00000005338 1146.00 4863.70 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
31. RPL35 ENSGALG00000035677 1144.00 4855.21 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
32. RPL27A ENSGALG00000005948 1140.00 4838.24 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPL24 ENSGALG00000015339 1132.00 4804.28 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
34. RPL29 ENSGALG00000026978 1092.00 4634.52 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
35. RPL32 ENSGALG00000027142 1070.00 4541.15 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
36. RPL7A ENSGALG00000003197 1063.00 4511.44 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
37. RPS14 ENSGALG00000004588 1060.00 4498.71 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
38. PPIA ENSGALG00000028600 1047.00 4443.54 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
39. RPL27 ENSGALG00000002837 1043.00 4426.56 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
40. RPL12 ENSGALG00000008806 1004.00 4261.04 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
41. MT-ND4 MT-ND4 990.00 4201.63
42. RPL38 ENSGALG00000001465 971.00 4120.99 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
43. RPS12 ENSGALG00000013990 962.00 4082.79 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
44. RPL36 ENSGALG00000000474 956.00 4057.33 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
45. RPL6 ENSGALG00000004818 942.00 3997.91 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
46. RPL18A 920.00 3904.54 ribosomal protein L18a
47. RPS23 ENSGALG00000015617 899.00 3815.42 ribosomal protein S23
48. SNRPD1 ENSGALG00000041334 885.00 3756.00 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
49. RPL26 RPL26 873.00 3705.07
50. RPS7 ENSGALG00000016392 854.00 3624.43 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. RPS16 ENSGALG00000026490 852.00 3615.95 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. MT-CYB MT-CYB 844.00 3581.99
53. RPS27A ENSGALG00000036790 842.00 3573.51 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. RPS3A ENSGALG00000010077 831.00 3526.82 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
55. RPL8 ENSGALG00000016232 828.00 3514.09 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
56. RPL5 ENSGALG00000005922 813.00 3450.43 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
57. RPS11 ENSGALG00000017299 812.00 3446.18 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
58. MDK ENSGALG00000008367 811.00 3441.94 midkine [Source:NCBI gene;Acc:423196]
59. RPL36AL ENSGALG00000004952 791.00 3357.06 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
60. RPL7 ENSGALG00000035252 754.00 3200.03 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
61. GNB2L1 ENSGALG00000000122 750.00 3183.05 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
62. RPL14 ENSGALG00000043379 723.00 3068.46 ribosomal protein L14
63. TCEB3 ENSGALG00000034625 719.00 3051.48 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
64. RPL21 ENSGALG00000027035 702.00 2979.34 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
65. RPL37A ENSGALG00000011472 682.00 2894.45 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
66. NME2 ENSGALG00000002932 668.00 2835.04 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
67. ANP32B ENSGALG00000037483 665.00 2822.31 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
68. ENSGALG00000028992 ENSGALG00000028992 637.00 2703.47
69. CIRBP ENSGALG00000030918 636.00 2699.23 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
70. RPS25 ENSGALG00000007699 636.00 2699.23 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
71. RPL23 ENSGALG00000001634 633.00 2686.49 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
72. RPS17 ENSGALG00000002157 619.00 2627.08 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
73. MT-ND6 MT-ND6 617.00 2618.59
74. RPS24 ENSGALG00000004871 612.00 2597.37 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
75. MT-CO1 MT-CO1 608.00 2580.39
76. TMSB4X ENSGALG00000026383 607.00 2576.15 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
77. RPS13 ENSGALG00000006096 603.00 2559.17 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
78. PRDX1 ENSGALG00000010243 593.00 2516.73 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
79. RPL10A ENSGALG00000002644 560.00 2376.68 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
80. RPS3 ENSGALG00000017330 559.00 2372.43 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
81. FTH FTH 551.00 2338.48
82. ENO1 ENSGALG00000002377 540.00 2291.80 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
83. EEF1D 538.00 2283.31 eukaryotic translation elongation factor 1 delta, transcript variant X13
84. RPS6 ENSGALG00000015082 517.00 2194.18 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
85. UBB ENSGALG00000004509 493.00 2092.33 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
86. RPL37 ENSGALG00000014833 473.00 2007.44 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
87. RPS20 ENSGALG00000014432 472.00 2003.20 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
88. STMN1 ENSGALG00000001475 472.00 2003.20 stathmin 1 [Source:NCBI gene;Acc:396057]
89. LDHB ENSGALG00000035836 451.00 1914.07 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
90. CRHOA CRHOA 438.00 1858.90
91. EIF5A2 ENSGALG00000009309 437.00 1854.66 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
92. HMGN2 HMGN2 435.00 1846.17
93. ENSGALG00000028649 ENSGALG00000028649 426.00 1807.97
94. RAN ENSGALG00000002569 423.00 1795.24 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
95. ATP5G3 412.00 1748.56 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
96. ALDOC ENSGALG00000026077 411.00 1744.31 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
97. RPL31 ENSGALG00000016775 400.00 1697.63 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
98. RPL22 ENSGALG00000000719 379.00 1608.50 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
99. SLC25A6_1 ENSGALG00000016691 379.00 1608.50 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
100. GAL10 GAL10 365.00 1549.08
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA