Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s60.

Sample reads: 235,874. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 8013.00 33973.69 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. MT-CO3 MT-CO3 6295.00 26689.67
3. HBG1 HBG1 5871.00 24891.99
4. HBE 4485.00 19015.60 hemoglobin subunit epsilon
5. RPLP0 ENSGALG00000023294 3073.00 13028.97 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPS10 ENSGALG00000002813 2485.00 10535.96 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. gga-mir-3533 ENSGALG00000027736 2369.00 10044.14 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 2362.00 10014.46 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. RPS15 ENSGALG00000015195 2294.00 9726.15 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
10. RPS29 ENSGALG00000012229 2292.00 9717.67 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. gga-mir-3527 gga-mir-3527 2050.00 8691.63
12. EEF1A EEF1A 2044.00 8666.19
13. RPL4 ENSGALG00000007711 1846.00 7826.71 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. GAPDH ENSGALG00000014442 1785.00 7568.08 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. MT-ATP6 MT-ATP6 1723.00 7305.21
16. RPL13 ENSGALG00000006179 1694.00 7182.26 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
17. RPL23A ENSGALG00000003966 1682.00 7131.38 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
18. RPS2 ENSGALG00000005490 1561.00 6618.36 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
19. RPS4 RPS4 1541.00 6533.56
20. RPL15 ENSGALG00000011290 1524.00 6461.49 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
21. RPSA 1475.00 6253.74 ribosomal protein SA
22. PPIA ENSGALG00000028600 1404.00 5952.71 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
23. MT-ND3 MT-ND3 1361.00 5770.40
24. RPS8 ENSGALG00000010124 1359.00 5761.92 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
25. MT-ND1 MT-ND1 1258.00 5333.70
26. RPS28 ENSGALG00000024398 1258.00 5333.70 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
27. RPL35 ENSGALG00000035677 1256.00 5325.22 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
28. RPLP1 ENSGALG00000030878 1217.00 5159.86 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
29. MT-ND5 MT-ND5 1206.00 5113.22
30. RPL32 ENSGALG00000027142 1206.00 5113.22 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
31. RPS14 ENSGALG00000004588 1198.00 5079.31 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
32. RPL24 ENSGALG00000015339 1188.00 5036.91 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
33. RPS21 ENSGALG00000005338 1157.00 4905.47 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
34. RPL19 ENSGALG00000001658 1152.00 4884.27 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. RPL7A ENSGALG00000003197 1112.00 4714.68 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. RPL27A ENSGALG00000005948 1100.00 4663.80 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPL18A 1061.00 4498.45 ribosomal protein L18a
38. RPL6 ENSGALG00000004818 1040.00 4409.41 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
39. RPL29 ENSGALG00000026978 1037.00 4396.69 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
40. MT-ND4 MT-ND4 1036.00 4392.45
41. RPS15A ENSGALG00000006771 1032.00 4375.50 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
42. RPL12 ENSGALG00000008806 988.00 4188.94 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
43. RPS11 ENSGALG00000017299 945.00 4006.63 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
44. RPS12 ENSGALG00000013990 907.00 3845.52 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
45. RPL27 ENSGALG00000002837 885.00 3752.24 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
46. RPL38 ENSGALG00000001465 872.00 3697.12 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
47. RPL26 RPL26 858.00 3637.77
48. RPS23 ENSGALG00000015617 855.00 3625.05 ribosomal protein S23
49. RPS16 ENSGALG00000026490 849.00 3599.61 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
50. RPS7 ENSGALG00000016392 844.00 3578.41 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. RPL36 ENSGALG00000000474 830.00 3519.05 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
52. GNB2L1 ENSGALG00000000122 801.00 3396.10 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
53. RPL7 ENSGALG00000035252 789.00 3345.22 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
54. RPS27A ENSGALG00000036790 765.00 3243.46 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
55. SNRPD1 ENSGALG00000041334 758.00 3213.78 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
56. RPL8 ENSGALG00000016232 757.00 3209.54 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
57. RPL14 ENSGALG00000043379 742.00 3145.95 ribosomal protein L14
58. MT-CYB MT-CYB 735.00 3116.27
59. RPS3A ENSGALG00000010077 728.00 3086.59 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
60. MT-ND6 MT-ND6 704.00 2984.83
61. NME2 ENSGALG00000002932 695.00 2946.68 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. RPL36AL ENSGALG00000004952 690.00 2925.48 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
63. RPL21 ENSGALG00000027035 671.00 2844.92 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
64. RPL37A ENSGALG00000011472 661.00 2802.52 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
65. RPL5 ENSGALG00000005922 661.00 2802.52 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
66. ANP32B ENSGALG00000037483 644.00 2730.44 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
67. RPS24 ENSGALG00000004871 643.00 2726.21 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
68. CIRBP ENSGALG00000030918 640.00 2713.49 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
69. RPS17 ENSGALG00000002157 640.00 2713.49 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
70. MT-CO1 MT-CO1 633.00 2683.81
71. RPL10A ENSGALG00000002644 625.00 2649.89 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
72. FTH FTH 618.00 2620.21
73. RPS25 ENSGALG00000007699 618.00 2620.21 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
74. TMSB4X ENSGALG00000026383 612.00 2594.77 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
75. PRDX1 ENSGALG00000010243 607.00 2573.57 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
76. TCEB3 ENSGALG00000034625 607.00 2573.57 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
77. RPL23 ENSGALG00000001634 596.00 2526.93 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
78. RPS13 ENSGALG00000006096 595.00 2522.69 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
79. RPS3 ENSGALG00000017330 556.00 2357.34 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
80. ENSGALG00000028992 ENSGALG00000028992 553.00 2344.62
81. UBB ENSGALG00000004509 550.00 2331.90 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
82. LDHB ENSGALG00000035836 548.00 2323.42 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
83. ENO1 ENSGALG00000002377 544.00 2306.46 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
84. EEF1D 537.00 2276.78 eukaryotic translation elongation factor 1 delta, transcript variant X13
85. MDK ENSGALG00000008367 522.00 2213.19 midkine [Source:NCBI gene;Acc:423196]
86. RPS6 ENSGALG00000015082 515.00 2183.51 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
87. EIF5A2 ENSGALG00000009309 505.00 2141.11 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
88. ALDOC ENSGALG00000026077 502.00 2128.39 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
89. RPS20 ENSGALG00000014432 494.00 2094.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
90. HMGN2 HMGN2 485.00 2056.31
91. ENSGALG00000028649 ENSGALG00000028649 458.00 1941.84
92. STMN1 ENSGALG00000001475 431.00 1827.36 stathmin 1 [Source:NCBI gene;Acc:396057]
93. MMP15 ENSGALG00000038758 426.00 1806.16 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
94. RPL37 ENSGALG00000014833 417.00 1768.01 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
95. ATP5G3 407.00 1725.61 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
96. CRHOA CRHOA 398.00 1687.45
97. ZNF593 ENSGALG00000000542 388.00 1645.05 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
98. ENSGALG00000018384 ENSGALG00000018384 371.00 1572.97
99. RAN ENSGALG00000002569 365.00 1547.53 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
100. GAL10 GAL10 363.00 1539.06
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA