Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s57.

Sample reads: 235,824. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 12701.00 53861.62 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. HBG1 HBG1 11972.00 50770.12
3. HBE 6891.00 29222.93 hemoglobin subunit epsilon
4. MT-CO3 MT-CO3 5521.00 23413.12
5. RPLP0 ENSGALG00000023294 2421.00 10266.83 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 2370.00 10050.55 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS10 ENSGALG00000002813 2219.00 9410.20 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. RPS29 ENSGALG00000012229 2211.00 9376.27 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
9. RPS15 ENSGALG00000015195 2126.00 9015.81 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
10. gga-mir-3533 ENSGALG00000027736 2020.00 8566.29 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. EEF1A EEF1A 1860.00 7887.77
12. RPL4 ENSGALG00000007711 1804.00 7650.29 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. RPL13 ENSGALG00000006179 1643.00 6967.53 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
14. RPL23A ENSGALG00000003966 1637.00 6942.09 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. RPS8 ENSGALG00000010124 1584.00 6717.33 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. GAPDH ENSGALG00000014442 1554.00 6590.11 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. RPS28 ENSGALG00000024398 1482.00 6284.77 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
18. RPS2 ENSGALG00000005490 1450.00 6149.07 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
19. gga-mir-3527 gga-mir-3527 1449.00 6144.83
20. RPL15 ENSGALG00000011290 1387.00 5881.90 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
21. RPS4 RPS4 1326.00 5623.22
22. RPL35 ENSGALG00000035677 1282.00 5436.63 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
23. RPS14 ENSGALG00000004588 1270.00 5385.74 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
24. RPL24 ENSGALG00000015339 1245.00 5279.72 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
25. RPLP1 ENSGALG00000030878 1237.00 5245.79 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
26. RPL19 ENSGALG00000001658 1192.00 5054.96 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
27. RPL7A ENSGALG00000003197 1182.00 5012.55 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
28. MT-ND3 MT-ND3 1168.00 4953.18
29. RPS21 ENSGALG00000005338 1164.00 4936.22 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
30. RPL27A ENSGALG00000005948 1150.00 4876.85 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
31. RPSA 1119.00 4745.39 ribosomal protein SA
32. MT-ATP6 MT-ATP6 1113.00 4719.94
33. RPL38 ENSGALG00000001465 1094.00 4639.37 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
34. RPL29 ENSGALG00000026978 1093.00 4635.13 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
35. RPS15A ENSGALG00000006771 1082.00 4588.48 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPL32 ENSGALG00000027142 1074.00 4554.55 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
37. RPL18A 1057.00 4482.46 ribosomal protein L18a
38. RPL26 RPL26 1057.00 4482.46
39. RPL36 ENSGALG00000000474 983.00 4168.65 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. RPL6 ENSGALG00000004818 976.00 4138.96 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
41. RPL12 ENSGALG00000008806 956.00 4054.15 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
42. PPIA ENSGALG00000028600 923.00 3914.20 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
43. RPS12 ENSGALG00000013990 868.00 3680.96 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
44. RPS23 ENSGALG00000015617 868.00 3680.96 ribosomal protein S23
45. RPS11 ENSGALG00000017299 861.00 3651.28 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
46. RPS16 ENSGALG00000026490 853.00 3617.35 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. RPL36AL ENSGALG00000004952 849.00 3600.39 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
48. SNRPD1 ENSGALG00000041334 833.00 3532.53 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
49. RPL27 ENSGALG00000002837 831.00 3524.05 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
50. RPL8 ENSGALG00000016232 825.00 3498.61 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
51. RPS7 ENSGALG00000016392 809.00 3430.76 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
52. RPS27A ENSGALG00000036790 807.00 3422.28 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
53. RPL14 ENSGALG00000043379 800.00 3392.59 ribosomal protein L14
54. MT-ND1 MT-ND1 795.00 3371.39
55. RPS3A ENSGALG00000010077 795.00 3371.39 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
56. RPL7 ENSGALG00000035252 747.00 3167.83 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
57. GNB2L1 ENSGALG00000000122 740.00 3138.15 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
58. RPL21 ENSGALG00000027035 736.00 3121.18 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
59. MT-ND5 MT-ND5 731.00 3099.98
60. ENSGALG00000028992 ENSGALG00000028992 709.00 3006.68
61. RPL5 ENSGALG00000005922 706.00 2993.96 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
62. NME2 ENSGALG00000002932 695.00 2947.31 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
63. FTH FTH 690.00 2926.11
64. RPS17 ENSGALG00000002157 690.00 2926.11 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
65. RPS25 ENSGALG00000007699 660.00 2798.89 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. MDK ENSGALG00000008367 649.00 2752.24 midkine [Source:NCBI gene;Acc:423196]
67. UBB ENSGALG00000004509 648.00 2748.00 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
68. MT-ND4 MT-ND4 644.00 2731.04
69. TCEB3 ENSGALG00000034625 638.00 2705.59 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
70. RPS6 ENSGALG00000015082 631.00 2675.91 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
71. PRDX1 ENSGALG00000010243 627.00 2658.94 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
72. RPL37A ENSGALG00000011472 627.00 2658.94 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
73. CIRBP ENSGALG00000030918 623.00 2641.98 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
74. RPS13 ENSGALG00000006096 617.00 2616.54 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
75. RPL10A ENSGALG00000002644 607.00 2574.13 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
76. RPS24 ENSGALG00000004871 575.00 2438.42 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
77. RPS3 ENSGALG00000017330 568.00 2408.74 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
78. RPS20 ENSGALG00000014432 567.00 2404.50 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
79. MT-CYB MT-CYB 555.00 2353.61
80. EEF1D 543.00 2302.72 eukaryotic translation elongation factor 1 delta, transcript variant X13
81. ANP32B ENSGALG00000037483 526.00 2230.63 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
82. RPL23 ENSGALG00000001634 514.00 2179.74 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
83. ENO1 ENSGALG00000002377 511.00 2167.02 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
84. TMSB4X ENSGALG00000026383 503.00 2133.09 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
85. RPL37 ENSGALG00000014833 495.00 2099.17 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
86. LDHB ENSGALG00000035836 474.00 2010.11 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
87. STMN1 ENSGALG00000001475 470.00 1993.15 stathmin 1 [Source:NCBI gene;Acc:396057]
88. MT-CO1 MT-CO1 448.00 1899.85
89. ENSGALG00000018384 ENSGALG00000018384 446.00 1891.37
90. ATP5L ENSGALG00000006899 421.00 1785.35 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
91. MT-ND6 MT-ND6 420.00 1781.11
92. HMGN2 HMGN2 419.00 1776.87
93. EIF5A2 ENSGALG00000009309 404.00 1713.26 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
94. CRHOA CRHOA 403.00 1709.02
95. RPL22 ENSGALG00000000719 392.00 1662.37 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
96. ATP5G3 380.00 1611.48 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
97. SLC25A6_1 ENSGALG00000016691 374.00 1586.04 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
98. ZNF593 ENSGALG00000000542 362.00 1535.15 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
99. ENSGALG00000022570 ENSGALG00000022570 352.00 1492.74
100. RPL31 ENSGALG00000016775 343.00 1454.57 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA