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Experiment Chicken_E3_aorta, section s52.

Sample reads: 235,700. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5583.00 23689.30
2. HBZ ENSGALG00000023740 3679.00 15610.41 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
3. RPLP0 ENSGALG00000023294 3528.00 14969.70 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
4. HBG1 HBG1 3369.00 14295.05
5. gga-mir-3533 ENSGALG00000027736 2666.00 11312.14 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. HBE 2530.00 10735.08 hemoglobin subunit epsilon
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 2481.00 10527.16 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPS29 ENSGALG00000012229 2389.00 10136.80 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
9. RPS10 ENSGALG00000002813 2262.00 9597.92 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. RPS15 ENSGALG00000015195 2213.00 9390.01 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
11. gga-mir-3527 gga-mir-3527 2185.00 9271.20
12. RPL4 ENSGALG00000007711 1923.00 8159.51 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. MT-ATP6 MT-ATP6 1894.00 8036.46
14. MT-ND5 MT-ND5 1801.00 7641.85
15. EEF1A EEF1A 1757.00 7455.15
16. GAPDH ENSGALG00000014442 1637.00 6945.98 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. RPL23A ENSGALG00000003966 1565.00 6640.47 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
18. RPS2 ENSGALG00000005490 1559.00 6615.01 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
19. RPS28 ENSGALG00000024398 1559.00 6615.01 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
20. RPSA 1549.00 6572.58 ribosomal protein SA
21. PPIA ENSGALG00000028600 1518.00 6441.05 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
22. RPS4 RPS4 1489.00 6318.00
23. RPS8 ENSGALG00000010124 1430.00 6067.65 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
24. MT-ND1 MT-ND1 1427.00 6054.92
25. RPL15 ENSGALG00000011290 1375.00 5834.28 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
26. RPS21 ENSGALG00000005338 1349.00 5723.96 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
27. RPS14 ENSGALG00000004588 1311.00 5562.72 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
28. RPL13 ENSGALG00000006179 1296.00 5499.08 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
29. RPL19 ENSGALG00000001658 1245.00 5282.68 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
30. RPLP1 ENSGALG00000030878 1245.00 5282.68 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
31. ENSGALG00000018384 ENSGALG00000018384 1177.00 4994.14
32. RPL24 ENSGALG00000015339 1164.00 4938.98 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
33. RPL29 ENSGALG00000026978 1142.00 4845.64 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
34. RPL7A ENSGALG00000003197 1141.00 4841.39 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
35. RPS11 ENSGALG00000017299 1140.00 4837.15 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
36. RPL27A ENSGALG00000005948 1134.00 4811.69 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. MT-ND4 MT-ND4 1093.00 4637.72
38. MT-ND3 MT-ND3 1079.00 4578.32
39. RPL38 ENSGALG00000001465 1076.00 4565.59 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
40. RPL36 ENSGALG00000000474 1034.00 4387.38 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
41. RPL27 ENSGALG00000002837 1017.00 4315.25 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
42. RPL12 ENSGALG00000008806 1007.00 4272.82 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
43. RPL35 ENSGALG00000035677 1006.00 4268.57 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
44. GNB2L1 ENSGALG00000000122 996.00 4226.14 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
45. RPL32 ENSGALG00000027142 982.00 4166.74 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
46. RPL6 ENSGALG00000004818 982.00 4166.74 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
47. RPL8 ENSGALG00000016232 975.00 4137.04 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
48. RPL18A 959.00 4069.15 ribosomal protein L18a
49. RPS15A ENSGALG00000006771 958.00 4064.90 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
50. RPL26 RPL26 956.00 4056.42
51. MDK ENSGALG00000008367 949.00 4026.71 midkine [Source:NCBI gene;Acc:423196]
52. RPS16 ENSGALG00000026490 902.00 3827.29 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
53. RPS12 ENSGALG00000013990 870.00 3691.51 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
54. MT-CYB MT-CYB 867.00 3678.78
55. MT-ND6 MT-ND6 824.00 3496.33
56. RPS23 ENSGALG00000015617 815.00 3458.14 ribosomal protein S23
57. RPS27A ENSGALG00000036790 811.00 3441.16 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
58. RPL7 ENSGALG00000035252 803.00 3407.22 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
59. RPS7 ENSGALG00000016392 800.00 3394.49 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
60. ANP32B ENSGALG00000037483 757.00 3212.04 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
61. RPL14 ENSGALG00000043379 721.00 3059.28 ribosomal protein L14
62. RPS3A ENSGALG00000010077 721.00 3059.28 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
63. RPS25 ENSGALG00000007699 719.00 3050.80 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
64. TCEB3 ENSGALG00000034625 712.00 3021.10 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
65. SNRPD1 ENSGALG00000041334 709.00 3008.37 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
66. RPL21 ENSGALG00000027035 682.00 2893.80 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
67. RPL37A ENSGALG00000011472 681.00 2889.56 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
68. MT-CO1 MT-CO1 680.00 2885.32
69. RPL36AL ENSGALG00000004952 664.00 2817.43 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
70. RPL5 ENSGALG00000005922 628.00 2664.68 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
71. RPL10A ENSGALG00000002644 619.00 2626.49 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
72. RPS17 ENSGALG00000002157 617.00 2618.00 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
73. RPS3 ENSGALG00000017330 616.00 2613.76 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
74. ALDOC ENSGALG00000026077 615.00 2609.51 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
75. RPS24 ENSGALG00000004871 613.00 2601.03 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
76. UBB ENSGALG00000004509 603.00 2558.60 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
77. NME2 ENSGALG00000002932 583.00 2473.74 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
78. PRDX1 ENSGALG00000010243 574.00 2435.55 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
79. ENSGALG00000028992 ENSGALG00000028992 570.00 2418.57
80. CIRBP ENSGALG00000030918 568.00 2410.09 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
81. RPS6 ENSGALG00000015082 556.00 2359.17 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
82. RPL23 ENSGALG00000001634 552.00 2342.20 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
83. ENO1 ENSGALG00000002377 549.00 2329.47 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
84. FTH FTH 545.00 2312.50
85. TMSB4X ENSGALG00000026383 537.00 2278.55 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
86. RPS20 ENSGALG00000014432 528.00 2240.36 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
87. RPS13 ENSGALG00000006096 512.00 2172.47 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
88. ATP5G3 490.00 2079.13 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
89. STMN1 ENSGALG00000001475 479.00 2032.45 stathmin 1 [Source:NCBI gene;Acc:396057]
90. RPL37 ENSGALG00000014833 478.00 2028.21 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
91. EEF1D 477.00 2023.97 eukaryotic translation elongation factor 1 delta, transcript variant X13
92. LDHB ENSGALG00000035836 477.00 2023.97 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
93. MT-ND2 MT-ND2 470.00 1994.26
94. HMGN2 HMGN2 441.00 1871.21
95. ENSGALG00000028649 ENSGALG00000028649 439.00 1862.73
96. EIF5A2 ENSGALG00000009309 434.00 1841.51 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
97. CRHOA CRHOA 430.00 1824.54
98. ZNF593 ENSGALG00000000542 421.00 1786.35 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
99. ENSGALG00000022570 ENSGALG00000022570 398.00 1688.76
100. RAN ENSGALG00000002569 393.00 1667.54 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA