Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s51.

Sample reads: 235,322. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5139.00 21840.85
2. RPLP0 ENSGALG00000023294 3635.00 15448.82 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2725.00 11581.31 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPL35A ENSGALG00000007611, ENSGALG00000041230 2313.00 9830.30 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
5. RPS15 ENSGALG00000015195 2292.00 9741.05 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
6. EEF1A EEF1A 2194.00 9324.54
7. RPS29 ENSGALG00000012229 2171.00 9226.79 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. RPS2 ENSGALG00000005490 2042.00 8678.54 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
9. gga-mir-3527 gga-mir-3527 1996.00 8483.04
10. RPS10 ENSGALG00000002813 1947.00 8274.79 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. RPL4 ENSGALG00000007711 1827.00 7764.79 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. HBZ ENSGALG00000023740 1824.00 7752.04 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
13. GAPDH ENSGALG00000014442 1795.00 7628.79 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. HBG1 HBG1 1715.00 7288.78
15. MT-ATP6 MT-ATP6 1693.00 7195.28
16. RPL13 ENSGALG00000006179 1561.00 6634.28 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
17. RPS4 RPS4 1536.00 6528.03
18. RPL23A ENSGALG00000003966 1535.00 6523.78 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
19. RPL15 ENSGALG00000011290 1469.00 6243.28 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. RPS28 ENSGALG00000024398 1465.00 6226.28 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
21. PPIA ENSGALG00000028600 1429.00 6073.28 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
22. MT-ND5 MT-ND5 1397.00 5937.28
23. RPSA 1382.00 5873.53 ribosomal protein SA
24. RPS8 ENSGALG00000010124 1327.00 5639.78 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
25. RPL24 ENSGALG00000015339 1291.00 5486.78 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
26. RPL35 ENSGALG00000035677 1281.00 5444.28 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
27. HBE 1238.00 5261.52 hemoglobin subunit epsilon
28. RPS14 ENSGALG00000004588 1195.00 5078.77 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
29. RPL27A ENSGALG00000005948 1191.00 5061.77 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. RPLP1 ENSGALG00000030878 1175.00 4993.77 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
31. MT-ND1 MT-ND1 1169.00 4968.27
32. RPS15A ENSGALG00000006771 1140.00 4845.02 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
33. RPS21 ENSGALG00000005338 1109.00 4713.27 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
34. MT-ND3 MT-ND3 1086.00 4615.52
35. RPL12 ENSGALG00000008806 1065.00 4526.27 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
36. RPL19 ENSGALG00000001658 1054.00 4479.52 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
37. RPL29 ENSGALG00000026978 1045.00 4441.27 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
38. RPL6 ENSGALG00000004818 1026.00 4360.52 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
39. RPL38 ENSGALG00000001465 1024.00 4352.02 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
40. RPL18A 961.00 4084.27 ribosomal protein L18a
41. MDK ENSGALG00000008367 955.00 4058.77 midkine [Source:NCBI gene;Acc:423196]
42. RPL7A ENSGALG00000003197 955.00 4058.77 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
43. ENSGALG00000018384 ENSGALG00000018384 946.00 4020.52
44. RPL27 ENSGALG00000002837 935.00 3973.77 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
45. RPL32 ENSGALG00000027142 927.00 3939.77 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
46. RPS27A ENSGALG00000036790 910.00 3867.52 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
47. GNB2L1 ENSGALG00000000122 894.00 3799.52 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
48. RPL36 ENSGALG00000000474 885.00 3761.27 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
49. MT-ND4 MT-ND4 876.00 3723.02
50. RPL26 RPL26 865.00 3676.27
51. MT-ND6 MT-ND6 836.00 3553.02
52. RPS12 ENSGALG00000013990 834.00 3544.52 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
53. RPL7 ENSGALG00000035252 816.00 3468.02 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
54. SNRPD1 ENSGALG00000041334 815.00 3463.77 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
55. RPL8 ENSGALG00000016232 789.00 3353.27 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
56. RPS23 ENSGALG00000015617 784.00 3332.02 ribosomal protein S23
57. RPS11 ENSGALG00000017299 781.00 3319.27 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
58. RPS7 ENSGALG00000016392 759.00 3225.77 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
59. RPS16 ENSGALG00000026490 748.00 3179.02 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
60. RPS3A ENSGALG00000010077 745.00 3166.27 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
61. MT-CYB MT-CYB 736.00 3128.01
62. RPL14 ENSGALG00000043379 730.00 3102.51 ribosomal protein L14
63. TCEB3 ENSGALG00000034625 728.00 3094.01 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
64. UBB ENSGALG00000004509 715.00 3038.76 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
65. RPL36AL ENSGALG00000004952 691.00 2936.76 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
66. RPL10A ENSGALG00000002644 677.00 2877.26 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
67. TMSB4X ENSGALG00000026383 666.00 2830.51 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
68. RPL37A ENSGALG00000011472 664.00 2822.01 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
69. RPL21 ENSGALG00000027035 658.00 2796.51 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
70. NME2 ENSGALG00000002932 657.00 2792.26 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
71. FTH FTH 653.00 2775.26
72. ALDOC ENSGALG00000026077 651.00 2766.76 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
73. ANP32B ENSGALG00000037483 621.00 2639.26 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
74. ENSGALG00000028992 ENSGALG00000028992 620.00 2635.01
75. RPL5 ENSGALG00000005922 617.00 2622.26 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
76. PRDX1 ENSGALG00000010243 597.00 2537.26 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
77. RPS17 ENSGALG00000002157 597.00 2537.26 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
78. STMN1 ENSGALG00000001475 597.00 2537.26 stathmin 1 [Source:NCBI gene;Acc:396057]
79. RPS25 ENSGALG00000007699 579.00 2460.76 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
80. RPS24 ENSGALG00000004871 577.00 2452.26 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
81. ENO1 ENSGALG00000002377 573.00 2435.26 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
82. RPS3 ENSGALG00000017330 567.00 2409.76 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
83. CIRBP ENSGALG00000030918 548.00 2329.01 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
84. EEF1D 545.00 2316.26 eukaryotic translation elongation factor 1 delta, transcript variant X13
85. LDHB ENSGALG00000035836 541.00 2299.26 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
86. MT-CO1 MT-CO1 534.00 2269.51
87. RPS13 ENSGALG00000006096 527.00 2239.76 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
88. RPS20 ENSGALG00000014432 510.00 2167.51 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
89. HMGN2 HMGN2 488.00 2074.01
90. RPL23 ENSGALG00000001634 488.00 2074.01 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
91. RPS6 ENSGALG00000015082 487.00 2069.76 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
92. CRHOA CRHOA 466.00 1980.51
93. RAN ENSGALG00000002569 447.00 1899.76 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
94. EIF5A2 ENSGALG00000009309 435.00 1848.76 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
95. ATP5G3 434.00 1844.51 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
96. RPL37 ENSGALG00000014833 428.00 1819.01 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
97. CHCHD2 ENSGALG00000002495 423.00 1797.76 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
98. MMP15 ENSGALG00000038758 418.00 1776.51 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
99. ENSGALG00000028649 ENSGALG00000028649 413.00 1755.26
100. SLC25A6_1 ENSGALG00000016691 407.00 1729.76 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA