Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s50.

Sample reads: 235,441. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5981.00 25405.77
2. RPLP0 ENSGALG00000023294 2985.00 12679.52 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2821.00 11982.89 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPL35A ENSGALG00000007611, ENSGALG00000041230 2717.00 11541.12 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
5. RPS10 ENSGALG00000002813 2462.00 10457.95 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. RPS29 ENSGALG00000012229 2305.00 9791.05 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
7. RPS15 ENSGALG00000015195 2180.00 9260.09 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. gga-mir-3527 gga-mir-3527 2143.00 9102.92
9. RPL4 ENSGALG00000007711 2139.00 9085.93 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
10. HBZ ENSGALG00000023740 2026.00 8605.93 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
11. EEF1A EEF1A 1784.00 7577.98
12. GAPDH ENSGALG00000014442 1685.00 7157.45 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. RPS4 RPS4 1615.00 6860.11
14. HBG1 HBG1 1599.00 6792.15
15. RPL23A ENSGALG00000003966 1570.00 6668.96 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
16. MT-ATP6 MT-ATP6 1552.00 6592.50
17. RPS28 ENSGALG00000024398 1551.00 6588.25 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
18. RPL13 ENSGALG00000006179 1542.00 6550.02 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPS2 ENSGALG00000005490 1511.00 6418.34 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
20. RPS8 ENSGALG00000010124 1454.00 6176.22 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPSA 1454.00 6176.22 ribosomal protein SA
22. MT-ND5 MT-ND5 1451.00 6163.48
23. PPIA ENSGALG00000028600 1355.00 5755.70 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
24. RPLP1 ENSGALG00000030878 1312.00 5573.04 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. RPL24 ENSGALG00000015339 1298.00 5513.57 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
26. RPL15 ENSGALG00000011290 1282.00 5445.61 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
27. RPL19 ENSGALG00000001658 1267.00 5381.89 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
28. RPS21 ENSGALG00000005338 1260.00 5352.16 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. HBE 1245.00 5288.44 hemoglobin subunit epsilon
30. MT-ND3 MT-ND3 1178.00 5003.84
31. RPS14 ENSGALG00000004588 1137.00 4829.69 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
32. RPL7A ENSGALG00000003197 1132.00 4808.45 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
33. MT-ND1 MT-ND1 1129.00 4795.70
34. RPL27 ENSGALG00000002837 1086.00 4613.05 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
35. RPL29 ENSGALG00000026978 1049.00 4455.89 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
36. RPL27A ENSGALG00000005948 1040.00 4417.66 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPL35 ENSGALG00000035677 1031.00 4379.43 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
38. ENSGALG00000018384 ENSGALG00000018384 1023.00 4345.44
39. RPL36 ENSGALG00000000474 1023.00 4345.44 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. RPL12 ENSGALG00000008806 998.00 4239.25 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
41. RPL18A 998.00 4239.25 ribosomal protein L18a
42. RPS15A ENSGALG00000006771 982.00 4171.29 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. MT-ND4 MT-ND4 975.00 4141.55
44. RPL38 ENSGALG00000001465 955.00 4056.60 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
45. RPL32 ENSGALG00000027142 953.00 4048.10 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
46. RPL6 ENSGALG00000004818 946.00 4018.37 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
47. RPL7 ENSGALG00000035252 908.00 3856.95 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
48. RPS23 ENSGALG00000015617 888.00 3772.00 ribosomal protein S23
49. RPS12 ENSGALG00000013990 864.00 3670.05 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
50. RPL26 RPL26 859.00 3648.81
51. ANP32B ENSGALG00000037483 856.00 3636.07 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
52. RPS16 ENSGALG00000026490 843.00 3580.85 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
53. RPS7 ENSGALG00000016392 843.00 3580.85 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. MDK ENSGALG00000008367 839.00 3563.86 midkine [Source:NCBI gene;Acc:423196]
55. RPS11 ENSGALG00000017299 827.00 3512.89 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
56. RPL14 ENSGALG00000043379 826.00 3508.64 ribosomal protein L14
57. SNRPD1 ENSGALG00000041334 818.00 3474.66 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
58. RPS3A ENSGALG00000010077 813.00 3453.42 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
59. GNB2L1 ENSGALG00000000122 758.00 3219.79 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
60. MT-ND6 MT-ND6 752.00 3194.30
61. RPL8 ENSGALG00000016232 750.00 3185.81 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
62. RPS27A ENSGALG00000036790 723.00 3071.12 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
63. MT-CYB MT-CYB 712.00 3024.39
64. RPS25 ENSGALG00000007699 692.00 2939.44 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
65. RPL36AL ENSGALG00000004952 687.00 2918.20 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
66. TCEB3 ENSGALG00000034625 680.00 2888.47 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
67. CIRBP ENSGALG00000030918 668.00 2837.49 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
68. RPS17 ENSGALG00000002157 665.00 2824.75 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
69. RPL21 ENSGALG00000027035 658.00 2795.02 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
70. ENO1 ENSGALG00000002377 654.00 2778.03 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
71. NME2 ENSGALG00000002932 649.00 2756.79 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
72. RPL5 ENSGALG00000005922 644.00 2735.55 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
73. PRDX1 ENSGALG00000010243 641.00 2722.80 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
74. RPS24 ENSGALG00000004871 626.00 2659.09 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
75. RPL23 ENSGALG00000001634 607.00 2578.38 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
76. RPL10A ENSGALG00000002644 593.00 2518.91 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
77. RPL37A ENSGALG00000011472 593.00 2518.91 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
78. RPS3 ENSGALG00000017330 593.00 2518.91 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
79. ALDOC ENSGALG00000026077 582.00 2472.19 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
80. UBB ENSGALG00000004509 582.00 2472.19 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
81. ENSGALG00000028992 ENSGALG00000028992 581.00 2467.94
82. MT-CO1 MT-CO1 556.00 2361.75
83. LDHB ENSGALG00000035836 542.00 2302.28 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
84. TMSB4X ENSGALG00000026383 530.00 2251.31 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
85. EIF5A2 ENSGALG00000009309 526.00 2234.31 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
86. EEF1D 524.00 2225.82 eukaryotic translation elongation factor 1 delta, transcript variant X13
87. ENSGALG00000028649 ENSGALG00000028649 517.00 2196.08
88. RPS13 ENSGALG00000006096 509.00 2162.10 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
89. STMN1 ENSGALG00000001475 497.00 2111.13 stathmin 1 [Source:NCBI gene;Acc:396057]
90. HMGN2 HMGN2 492.00 2089.89
91. RPS6 ENSGALG00000015082 470.00 1996.44 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
92. RPS20 ENSGALG00000014432 452.00 1919.98 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
93. ATP5G3 449.00 1907.24 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
94. FTH FTH 444.00 1886.00
95. CRHOA CRHOA 426.00 1809.54
96. RPL37 ENSGALG00000014833 417.00 1771.31 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
97. ZNF593 ENSGALG00000000542 414.00 1758.57 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
98. SLC25A6_1 ENSGALG00000016691 407.00 1728.83 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
99. CHCHD2 ENSGALG00000002495 398.00 1690.60 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
100. ENSGALG00000022570 ENSGALG00000022570 383.00 1626.89
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA