Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s5.

Sample reads: 234,996. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5185.00 22066.55
2. RPLP0 ENSGALG00000023294 3908.00 16631.84 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. RPS10 ENSGALG00000002813 2548.00 10843.89 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
4. RPS29 ENSGALG00000012229 2520.00 10724.73 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 2511.00 10686.43 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPL4 ENSGALG00000007711 2353.00 10014.00 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
7. RPS15 ENSGALG00000015195 2291.00 9750.14 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. gga-mir-3533 ENSGALG00000027736 2273.00 9673.53 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. GAPDH ENSGALG00000014442 2223.00 9460.74 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. EEF1A EEF1A 2136.00 9090.48
11. gga-mir-3527 gga-mir-3527 2048.00 8715.97
12. MT-ATP6 MT-ATP6 2047.00 8711.71
13. RPS2 ENSGALG00000005490 1931.00 8218.04 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
14. RPL13 ENSGALG00000006179 1852.00 7881.82 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
15. RPL23A ENSGALG00000003966 1775.00 7554.12 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
16. RPS8 ENSGALG00000010124 1615.00 6873.19 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
17. RPS4 RPS4 1583.00 6737.00
18. RPS28 ENSGALG00000024398 1519.00 6464.63 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
19. RPSA 1517.00 6456.12 ribosomal protein SA
20. MT-ND5 MT-ND5 1465.00 6234.81
21. RPL15 ENSGALG00000011290 1457.00 6200.77 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. MT-ND1 MT-ND1 1455.00 6192.25
23. PPIA ENSGALG00000028600 1381.00 5877.32 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
24. RPL35 ENSGALG00000035677 1381.00 5877.32 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
25. RPLP1 ENSGALG00000030878 1333.00 5673.04 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
26. RPL19 ENSGALG00000001658 1316.00 5600.69 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
27. RPS14 ENSGALG00000004588 1298.00 5524.09 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
28. RPL24 ENSGALG00000015339 1254.00 5336.83 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
29. RPL27A ENSGALG00000005948 1254.00 5336.83 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. RPL7A ENSGALG00000003197 1200.00 5107.01 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. RPL18A 1165.00 4958.06 ribosomal protein L18a
32. RPL32 ENSGALG00000027142 1122.00 4775.06 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
33. RPS15A ENSGALG00000006771 1122.00 4775.06 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
34. RPL36 ENSGALG00000000474 1084.00 4613.34 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
35. RPS21 ENSGALG00000005338 1081.00 4600.57 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
36. RPL6 ENSGALG00000004818 1054.00 4485.66 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
37. RPL12 ENSGALG00000008806 1033.00 4396.29 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
38. RPL27 ENSGALG00000002837 1018.00 4332.45 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
39. RPL26 RPL26 1012.00 4306.91
40. RPL29 ENSGALG00000026978 1001.00 4260.10 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. SNRPD1 ENSGALG00000041334 997.00 4243.08 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
42. MT-ND3 MT-ND3 986.00 4196.26
43. RPL8 ENSGALG00000016232 970.00 4128.17 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
44. GNB2L1 ENSGALG00000000122 969.00 4123.91 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
45. RPL38 ENSGALG00000001465 962.00 4094.12 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
46. RPS27A ENSGALG00000036790 960.00 4085.61 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
47. RPS11 ENSGALG00000017299 957.00 4072.84 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
48. RPS16 ENSGALG00000026490 939.00 3996.24 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
49. MT-ND4 MT-ND4 936.00 3983.47
50. ANP32B ENSGALG00000037483 914.00 3889.84 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
51. HBZ ENSGALG00000023740 901.00 3834.52 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
52. RPL7 ENSGALG00000035252 896.00 3813.24 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
53. RPS23 ENSGALG00000015617 874.00 3719.61 ribosomal protein S23
54. RPS7 ENSGALG00000016392 859.00 3655.77 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. RPS12 ENSGALG00000013990 842.00 3583.42 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
56. NME2 ENSGALG00000002932 824.00 3506.82 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
57. RPL14 ENSGALG00000043379 803.00 3417.44 ribosomal protein L14
58. MDK ENSGALG00000008367 769.00 3272.74 midkine [Source:NCBI gene;Acc:423196]
59. ENO1 ENSGALG00000002377 758.00 3225.93 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
60. RPL21 ENSGALG00000027035 747.00 3179.12 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
61. RPL10A ENSGALG00000002644 746.00 3174.86 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
62. RPL5 ENSGALG00000005922 744.00 3166.35 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
63. RPS3A ENSGALG00000010077 734.00 3123.79 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
64. MT-CYB MT-CYB 728.00 3098.25
65. ENSGALG00000018384 ENSGALG00000018384 726.00 3089.74
66. TCEB3 ENSGALG00000034625 711.00 3025.91 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
67. HBG1 HBG1 695.00 2957.81
68. CIRBP ENSGALG00000030918 693.00 2949.30 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
69. RPL36AL ENSGALG00000004952 693.00 2949.30 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
70. RPS25 ENSGALG00000007699 673.00 2864.18 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
71. LDHB ENSGALG00000035836 670.00 2851.42 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
72. MT-CO1 MT-CO1 632.00 2689.69
73. RPS17 ENSGALG00000002157 627.00 2668.41 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
74. ALDOC ENSGALG00000026077 612.00 2604.58 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
75. RPL37A ENSGALG00000011472 606.00 2579.04 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
76. RPS13 ENSGALG00000006096 606.00 2579.04 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. RPS20 ENSGALG00000014432 599.00 2549.25 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
78. RPL23 ENSGALG00000001634 594.00 2527.97 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
79. UBB ENSGALG00000004509 594.00 2527.97 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
80. RPS3 ENSGALG00000017330 579.00 2464.13 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
81. RPS24 ENSGALG00000004871 575.00 2447.11 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
82. ENSGALG00000028992 ENSGALG00000028992 566.00 2408.81
83. FTH FTH 558.00 2374.76
84. MT-ND6 MT-ND6 537.00 2285.39
85. HMGN2 HMGN2 515.00 2191.76
86. PRDX1 ENSGALG00000010243 514.00 2187.50 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
87. EEF1D 513.00 2183.25 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. ATP5G3 499.00 2123.67 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
89. RPS6 ENSGALG00000015082 498.00 2119.41 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
90. ENSGALG00000028649 ENSGALG00000028649 497.00 2115.15
91. TMSB4X ENSGALG00000026383 494.00 2102.39 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
92. HBE 489.00 2081.11 hemoglobin subunit epsilon
93. PKM ENSGALG00000001992 487.00 2072.60 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
94. STMN1 ENSGALG00000001475 474.00 2017.27 stathmin 1 [Source:NCBI gene;Acc:396057]
95. EIF5A2 ENSGALG00000009309 463.00 1970.46 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
96. RPL37 ENSGALG00000014833 461.00 1961.94 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
97. CHCHD2 ENSGALG00000002495 449.00 1910.87 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
98. RAN ENSGALG00000002569 433.00 1842.78 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
99. RPL31 ENSGALG00000016775 425.00 1808.73 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
100. FKBP12 FKBP12 412.00 1753.41
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA