Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s49.

Sample reads: 235,431. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5685.00 24148.02
2. RPLP0 ENSGALG00000023294 2988.00 12692.05 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2931.00 12449.93 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. HBZ ENSGALG00000023740 2811.00 11940.21 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 2710.00 11511.19 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. HBG1 HBG1 2528.00 10738.12
7. RPS29 ENSGALG00000012229 2445.00 10385.56 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. RPS10 ENSGALG00000002813 2438.00 10355.83 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. gga-mir-3527 gga-mir-3527 2249.00 9553.02
10. EEF1A EEF1A 2234.00 9489.30
11. RPS15 ENSGALG00000015195 2055.00 8728.97 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
12. RPL4 ENSGALG00000007711 1929.00 8193.76 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. GAPDH ENSGALG00000014442 1821.00 7735.01 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. RPS2 ENSGALG00000005490 1805.00 7667.05 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
15. MT-ATP6 MT-ATP6 1725.00 7327.24
16. HBE 1681.00 7140.34 hemoglobin subunit epsilon
17. RPL23A ENSGALG00000003966 1568.00 6660.35 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
18. MT-ND5 MT-ND5 1539.00 6537.17
19. RPL13 ENSGALG00000006179 1484.00 6303.55 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. RPS4 RPS4 1476.00 6269.57
21. RPS8 ENSGALG00000010124 1476.00 6269.57 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
22. RPL15 ENSGALG00000011290 1445.00 6137.89 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
23. RPSA 1435.00 6095.41 ribosomal protein SA
24. RPS28 ENSGALG00000024398 1403.00 5959.49 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
25. RPL19 ENSGALG00000001658 1356.00 5759.85 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. RPLP1 ENSGALG00000030878 1323.00 5619.67 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
27. PPIA ENSGALG00000028600 1307.00 5551.71 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
28. RPS14 ENSGALG00000004588 1278.00 5428.53 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
29. RPL35 ENSGALG00000035677 1226.00 5207.65 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
30. RPL24 ENSGALG00000015339 1225.00 5203.40 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
31. RPS21 ENSGALG00000005338 1200.00 5097.21 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
32. MT-ND1 MT-ND1 1194.00 5071.72
33. RPL7A ENSGALG00000003197 1154.00 4901.82 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. RPL6 ENSGALG00000004818 1133.00 4812.61 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
35. RPL29 ENSGALG00000026978 1130.00 4799.87 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
36. RPL27A ENSGALG00000005948 1116.00 4740.40 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPL36 ENSGALG00000000474 1107.00 4702.17 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
38. RPS15A ENSGALG00000006771 1092.00 4638.46 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
39. RPL18A 1088.00 4621.47 ribosomal protein L18a
40. MT-ND3 MT-ND3 1086.00 4612.97
41. RPL32 ENSGALG00000027142 1071.00 4549.26 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
42. RPL27 ENSGALG00000002837 1013.00 4302.89 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. RPL12 ENSGALG00000008806 1008.00 4281.65 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
44. RPL38 ENSGALG00000001465 992.00 4213.69 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
45. MT-ND4 MT-ND4 972.00 4128.74
46. RPL26 RPL26 938.00 3984.32
47. RPS16 ENSGALG00000026490 924.00 3924.85 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. RPS11 ENSGALG00000017299 923.00 3920.60 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
49. RPS23 ENSGALG00000015617 920.00 3907.86 ribosomal protein S23
50. RPS27A ENSGALG00000036790 919.00 3903.61 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. RPL7 ENSGALG00000035252 893.00 3793.17 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
52. GNB2L1 ENSGALG00000000122 870.00 3695.48 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
53. SNRPD1 ENSGALG00000041334 852.00 3619.02 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
54. RPS7 ENSGALG00000016392 819.00 3478.84 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. RPS3A ENSGALG00000010077 807.00 3427.87 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
56. RPL8 ENSGALG00000016232 791.00 3359.91 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
57. MT-CYB MT-CYB 789.00 3351.41
58. RPL36AL ENSGALG00000004952 767.00 3257.97 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
59. MDK ENSGALG00000008367 733.00 3113.54 midkine [Source:NCBI gene;Acc:423196]
60. RPS12 ENSGALG00000013990 732.00 3109.30 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
61. ENSGALG00000018384 ENSGALG00000018384 727.00 3088.06
62. RPL37A ENSGALG00000011472 725.00 3079.56 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. TCEB3 ENSGALG00000034625 713.00 3028.59 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
64. RPL14 ENSGALG00000043379 707.00 3003.11 ribosomal protein L14
65. NME2 ENSGALG00000002932 700.00 2973.37 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
66. RPL21 ENSGALG00000027035 696.00 2956.38 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
67. RPL5 ENSGALG00000005922 661.00 2807.71 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
68. RPS17 ENSGALG00000002157 660.00 2803.46 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
69. MT-ND6 MT-ND6 655.00 2782.23
70. RPL10A ENSGALG00000002644 648.00 2752.49 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
71. RPS25 ENSGALG00000007699 644.00 2735.50 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
72. ANP32B ENSGALG00000037483 643.00 2731.25 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
73. RPS13 ENSGALG00000006096 634.00 2693.02 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
74. RPS3 ENSGALG00000017330 632.00 2684.53 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
75. RPS24 ENSGALG00000004871 618.00 2625.06 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
76. TMSB4X ENSGALG00000026383 611.00 2595.33 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
77. CIRBP ENSGALG00000030918 595.00 2527.37 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
78. ENO1 ENSGALG00000002377 592.00 2514.62 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
79. RPS20 ENSGALG00000014432 580.00 2463.65 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
80. UBB ENSGALG00000004509 580.00 2463.65 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
81. FTH FTH 571.00 2425.42
82. ALDOC ENSGALG00000026077 566.00 2404.18 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
83. PRDX1 ENSGALG00000010243 559.00 2374.45 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
84. RPL23 ENSGALG00000001634 552.00 2344.72 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
85. ENSGALG00000028992 ENSGALG00000028992 548.00 2327.72
86. RPS6 ENSGALG00000015082 547.00 2323.48 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
87. MT-CO1 MT-CO1 546.00 2319.23
88. LDHB ENSGALG00000035836 528.00 2242.77 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
89. RPL37 ENSGALG00000014833 522.00 2217.29 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
90. ATP5G3 484.00 2055.87 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
91. HMGN2 HMGN2 470.00 1996.41
92. STMN1 ENSGALG00000001475 468.00 1987.91 stathmin 1 [Source:NCBI gene;Acc:396057]
93. EEF1D 462.00 1962.43 eukaryotic translation elongation factor 1 delta, transcript variant X13
94. ENSGALG00000028649 ENSGALG00000028649 434.00 1843.49
95. ZNF593 ENSGALG00000000542 421.00 1788.27 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
96. EIF5A2 ENSGALG00000009309 420.00 1784.02 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
97. CRHOA CRHOA 404.00 1716.06
98. RAN ENSGALG00000002569 396.00 1682.08 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
99. FKBP12 FKBP12 377.00 1601.37
100. RPL22 ENSGALG00000000719 377.00 1601.37 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA