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Experiment Chicken_E3_aorta, section s38.

Sample reads: 234,960. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4322.00 18395.25
2. RPL35A ENSGALG00000007611, ENSGALG00000041230 2803.00 11930.10 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
3. gga-mir-3527 gga-mir-3527 2541.00 10814.97
4. RPS10 ENSGALG00000002813 2524.00 10742.62 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
5. gga-mir-3533 ENSGALG00000027736 2516.00 10708.57 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. RPS29 ENSGALG00000012229 2183.00 9291.26 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
7. EEF1A EEF1A 2099.00 8933.74
8. RPLP0 ENSGALG00000023294 1954.00 8316.59 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
9. RPL23A ENSGALG00000003966 1945.00 8278.29 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
10. RPL4 ENSGALG00000007711 1889.00 8039.94 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
11. RPS15 ENSGALG00000015195 1766.00 7516.43 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
12. MT-ND5 MT-ND5 1733.00 7375.97
13. RPL13 ENSGALG00000006179 1693.00 7205.73 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
14. GAPDH ENSGALG00000014442 1689.00 7188.70 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPL35 ENSGALG00000035677 1531.00 6516.22 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
16. RPS4 RPS4 1512.00 6435.36
17. MT-ND3 MT-ND3 1508.00 6418.33
18. RPS21 ENSGALG00000005338 1443.00 6141.68 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
19. RPSA 1431.00 6090.61 ribosomal protein SA
20. MT-ATP6 MT-ATP6 1427.00 6073.58
21. RPL19 ENSGALG00000001658 1400.00 5958.66 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
22. RPL29 ENSGALG00000026978 1383.00 5886.31 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
23. RPL6 ENSGALG00000004818 1321.00 5622.43 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
24. RPS2 ENSGALG00000005490 1300.00 5533.05 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
25. RPL15 ENSGALG00000011290 1271.00 5409.62 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
26. RPL36 ENSGALG00000000474 1227.00 5222.34 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
27. MT-ND1 MT-ND1 1218.00 5184.04
28. RPS15A ENSGALG00000006771 1218.00 5184.04 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
29. RPL24 ENSGALG00000015339 1214.00 5167.01 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
30. RPS8 ENSGALG00000010124 1198.00 5098.91 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
31. RPL27 ENSGALG00000002837 1191.00 5069.12 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
32. RPS14 ENSGALG00000004588 1187.00 5052.10 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
33. RPS11 ENSGALG00000017299 1175.00 5001.02 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
34. RPL7A ENSGALG00000003197 1123.00 4779.70 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
35. RPLP1 ENSGALG00000030878 1100.00 4681.81 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
36. RPL27A ENSGALG00000005948 1071.00 4558.38 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. MT-ND4 MT-ND4 1048.00 4460.49
38. PPIA ENSGALG00000028600 1018.00 4332.80 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
39. RPL38 ENSGALG00000001465 1014.00 4315.78 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
40. RPL7 ENSGALG00000035252 985.00 4192.35 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
41. RPL32 ENSGALG00000027142 983.00 4183.83 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
42. GNB2L1 ENSGALG00000000122 939.00 3996.56 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
43. RPS23 ENSGALG00000015617 937.00 3988.05 ribosomal protein S23
44. RPL18A 914.00 3890.16 ribosomal protein L18a
45. RPS12 ENSGALG00000013990 906.00 3856.11 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
46. RPS27A ENSGALG00000036790 891.00 3792.26 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
47. RPL12 ENSGALG00000008806 885.00 3766.73 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. RPS16 ENSGALG00000026490 883.00 3758.21 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
49. SNRPD1 ENSGALG00000041334 848.00 3609.25 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
50. TCEB3 ENSGALG00000034625 846.00 3600.74 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
51. RPS17 ENSGALG00000002157 837.00 3562.43 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
52. RPL14 ENSGALG00000043379 825.00 3511.36 ribosomal protein L14
53. RPL36AL ENSGALG00000004952 823.00 3502.84 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
54. RPL5 ENSGALG00000005922 819.00 3485.82 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
55. LDHB ENSGALG00000035836 804.00 3421.98 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
56. MT-CYB MT-CYB 804.00 3421.98
57. RPS7 ENSGALG00000016392 800.00 3404.95 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
58. RPL23 ENSGALG00000001634 781.00 3324.08 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
59. RPS28 ENSGALG00000024398 779.00 3315.57 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
60. PRDX1 ENSGALG00000010243 754.00 3209.17 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
61. RPL21 ENSGALG00000027035 748.00 3183.63 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
62. RPS24 ENSGALG00000004871 746.00 3175.12 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
63. RPS3A ENSGALG00000010077 731.00 3111.27 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
64. RPL8 ENSGALG00000016232 729.00 3102.76 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
65. EEF1D 716.00 3047.43 eukaryotic translation elongation factor 1 delta, transcript variant X13
66. RPL37A ENSGALG00000011472 716.00 3047.43 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
67. NME2 ENSGALG00000002932 712.00 3030.41 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
68. RPL26 RPL26 706.00 3004.87
69. RPS3 ENSGALG00000017330 704.00 2996.36 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
70. EIF5A2 ENSGALG00000009309 700.00 2979.33 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
71. ENO1 ENSGALG00000002377 698.00 2970.82 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
72. RPS25 ENSGALG00000007699 696.00 2962.31 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. CIRBP ENSGALG00000030918 675.00 2872.93 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
74. HBZ ENSGALG00000023740 664.00 2826.11 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
75. MT-CO1 MT-CO1 654.00 2783.55
76. ANP32B ENSGALG00000037483 606.00 2579.25 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
77. HBG1 HBG1 585.00 2489.87
78. RPS13 ENSGALG00000006096 571.00 2430.28 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
79. TMSB4X ENSGALG00000026383 567.00 2413.26 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
80. ATP5G3 552.00 2349.42 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
81. CRHOA CRHOA 525.00 2234.50
82. UBB ENSGALG00000004509 504.00 2145.12 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
83. RPL10A ENSGALG00000002644 489.00 2081.28 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
84. STMN1 ENSGALG00000001475 469.00 1996.15 stathmin 1 [Source:NCBI gene;Acc:396057]
85. SLC25A6_1 ENSGALG00000016691 464.00 1974.87 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
86. FTH FTH 458.00 1949.33
87. RPS6 ENSGALG00000015082 450.00 1915.28 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
88. ENSGALG00000018384 ENSGALG00000018384 439.00 1868.47
89. HMGN2 HMGN2 425.00 1808.88
90. RAN ENSGALG00000002569 425.00 1808.88 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
91. MDK ENSGALG00000008367 423.00 1800.37 midkine [Source:NCBI gene;Acc:423196]
92. RPL31 ENSGALG00000016775 417.00 1774.83 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
93. ALDOC ENSGALG00000026077 412.00 1753.55 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
94. HSPA8 ENSGALG00000006512 410.00 1745.04 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
95. EIF1 ENSGALG00000028517 408.00 1736.52 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
96. TPT1 ENSGALG00000028872 408.00 1736.52 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
97. ENSGALG00000028992 ENSGALG00000028992 396.00 1685.45
98. ATP5L ENSGALG00000006899 379.00 1613.10 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
99. MT-ND6 MT-ND6 379.00 1613.10
100. CHCHD2 ENSGALG00000002495 377.00 1604.58 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA