Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s37.

Sample reads: 235,969. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5331.00 22594.82
2. RPLP0 ENSGALG00000023294 2910.00 12333.70 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2728.00 11562.31 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. EEF1A EEF1A 2326.00 9858.48
5. RPS10 ENSGALG00000002813 2278.00 9655.04 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. RPS29 ENSGALG00000012229 2161.00 9159.15 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
7. GAPDH ENSGALG00000014442 1923.00 8150.41 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. RPS15 ENSGALG00000015195 1859.00 7879.16 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
9. RPL35A ENSGALG00000007611, ENSGALG00000041230 1825.00 7735.05 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
10. gga-mir-3527 gga-mir-3527 1824.00 7730.81
11. HBZ ENSGALG00000023740 1805.00 7650.28 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
12. RPS8 ENSGALG00000010124 1739.00 7370.55 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
13. RPL4 ENSGALG00000007711 1698.00 7196.78 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
14. MT-ATP6 MT-ATP6 1667.00 7065.39
15. PPIA ENSGALG00000028600 1605.00 6802.61 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
16. RPL15 ENSGALG00000011290 1552.00 6577.97 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
17. RPS2 ENSGALG00000005490 1535.00 6505.92 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
18. RPL13 ENSGALG00000006179 1464.00 6204.99 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPSA 1426.00 6043.94 ribosomal protein SA
20. RPL23A ENSGALG00000003966 1401.00 5937.98 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
21. HBG1 HBG1 1400.00 5933.74
22. RPS28 ENSGALG00000024398 1294.00 5484.47 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
23. RPS4 RPS4 1277.00 5412.42
24. RPLP1 ENSGALG00000030878 1253.00 5310.69 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. RPL19 ENSGALG00000001658 1190.00 5043.68 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. MT-ND5 MT-ND5 1175.00 4980.10
27. RPS14 ENSGALG00000004588 1169.00 4954.67 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
28. RPL24 ENSGALG00000015339 1165.00 4937.72 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
29. RPL32 ENSGALG00000027142 1147.00 4861.43 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
30. RPL35 ENSGALG00000035677 1126.00 4772.42 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
31. RPL6 ENSGALG00000004818 1123.00 4759.70 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
32. MT-ND3 MT-ND3 1108.00 4696.13
33. RPL7A ENSGALG00000003197 1072.00 4543.55 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
34. RPL27A ENSGALG00000005948 1061.00 4496.93 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
35. RPL18A 1051.00 4454.54 ribosomal protein L18a
36. GNB2L1 ENSGALG00000000122 1045.00 4429.11 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
37. RPS11 ENSGALG00000017299 1032.00 4374.01 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
38. RPS15A ENSGALG00000006771 1029.00 4361.30 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
39. MT-ND1 MT-ND1 1019.00 4318.91
40. HBE 989.00 4191.76 hemoglobin subunit epsilon
41. RPS21 ENSGALG00000005338 948.00 4017.99 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
42. MT-ND4 MT-ND4 942.00 3992.56
43. RPL8 ENSGALG00000016232 935.00 3962.89 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
44. RPL26 RPL26 915.00 3878.12
45. RPL38 ENSGALG00000001465 910.00 3856.93 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
46. RPL36 ENSGALG00000000474 900.00 3814.55 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
47. RPL12 ENSGALG00000008806 879.00 3725.54 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
48. RPL29 ENSGALG00000026978 872.00 3695.87 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
49. RPS27A ENSGALG00000036790 860.00 3645.01 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
50. SNRPD1 ENSGALG00000041334 858.00 3636.53 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
51. RPL27 ENSGALG00000002837 857.00 3632.29 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
52. MT-CYB MT-CYB 854.00 3619.58
53. MT-ND6 MT-ND6 817.00 3462.76
54. RPS12 ENSGALG00000013990 816.00 3458.52 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
55. RPS3A ENSGALG00000010077 797.00 3377.99 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
56. MDK ENSGALG00000008367 788.00 3339.85 midkine [Source:NCBI gene;Acc:423196]
57. RPL7 ENSGALG00000035252 785.00 3327.13 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
58. RPL21 ENSGALG00000027035 757.00 3208.46 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
59. RPS16 ENSGALG00000026490 753.00 3191.50 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
60. NME2 ENSGALG00000002932 752.00 3187.26 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
61. RPS23 ENSGALG00000015617 739.00 3132.17 ribosomal protein S23
62. RPL37A ENSGALG00000011472 736.00 3119.45 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. RPS25 ENSGALG00000007699 730.00 3094.02 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
64. RPS7 ENSGALG00000016392 729.00 3089.78 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. ALDOC ENSGALG00000026077 713.00 3021.97 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
66. RPL36AL ENSGALG00000004952 704.00 2983.82 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
67. CIRBP ENSGALG00000030918 702.00 2975.35 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
68. RPL14 ENSGALG00000043379 702.00 2975.35 ribosomal protein L14
69. TCEB3 ENSGALG00000034625 684.00 2899.05 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
70. UBB ENSGALG00000004509 676.00 2865.15 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
71. ENSGALG00000018384 ENSGALG00000018384 640.00 2712.57
72. RPL5 ENSGALG00000005922 639.00 2708.33 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
73. RPL10A ENSGALG00000002644 623.00 2640.51 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
74. ANP32B ENSGALG00000037483 614.00 2602.37 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
75. HMGN2 HMGN2 586.00 2483.69
76. RPS13 ENSGALG00000006096 576.00 2441.31 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. EEF1D 569.00 2411.64 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. ENO1 ENSGALG00000002377 567.00 2403.16 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
79. FTH FTH 567.00 2403.16
80. RPS17 ENSGALG00000002157 548.00 2322.63 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
81. MMP15 ENSGALG00000038758 546.00 2314.16 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
82. PRDX1 ENSGALG00000010243 544.00 2305.68 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
83. LDHB ENSGALG00000035836 540.00 2288.73 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
84. MT-CO1 MT-CO1 540.00 2288.73
85. RPS20 ENSGALG00000014432 540.00 2288.73 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
86. RPS3 ENSGALG00000017330 532.00 2254.82 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
87. TMSB4X ENSGALG00000026383 530.00 2246.34 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
88. RPS6 ENSGALG00000015082 518.00 2195.48 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
89. PKM ENSGALG00000001992 514.00 2178.53 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
90. ENSGALG00000028992 ENSGALG00000028992 511.00 2165.81
91. ENSGALG00000028649 ENSGALG00000028649 501.00 2123.43
92. RPL23 ENSGALG00000001634 497.00 2106.48 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
93. STMN1 ENSGALG00000001475 486.00 2059.85 stathmin 1 [Source:NCBI gene;Acc:396057]
94. ATP5G3 485.00 2055.62 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
95. RPS24 ENSGALG00000004871 484.00 2051.38 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
96. HMGN5 ENSGALG00000007131 477.00 2021.71 high mobility group nucleosome binding domain 5, transcript variant X1
97. EIF5A2 ENSGALG00000009309 468.00 1983.56 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
98. DYL1 ENSGALG00000007153 433.00 1835.22 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
99. ENSGALG00000022570 ENSGALG00000022570 416.00 1763.17
100. SLC25A6_1 ENSGALG00000016691 411.00 1741.98 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA