Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s36.

Sample reads: 235,095. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6489.00 27603.72
2. RPLP0 ENSGALG00000023294 3070.00 13059.55 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2422.00 10303.01 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. HBZ ENSGALG00000023740 2348.00 9988.22 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
5. RPS10 ENSGALG00000002813 2211.00 9405.43 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 2172.00 9239.53 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. EEF1A EEF1A 2109.00 8971.53
8. RPS29 ENSGALG00000012229 2044.00 8695.02 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
9. GAPDH ENSGALG00000014442 1983.00 8435.53 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. HBG1 HBG1 1917.00 8154.77
11. gga-mir-3527 gga-mir-3527 1891.00 8044.17
12. RPL15 ENSGALG00000011290 1718.00 7308.24 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
13. RPS15 ENSGALG00000015195 1716.00 7299.74 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
14. RPL4 ENSGALG00000007711 1711.00 7278.47 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
15. RPS2 ENSGALG00000005490 1645.00 6997.71 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
16. RPLP1 ENSGALG00000030878 1555.00 6614.85 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
17. RPS8 ENSGALG00000010124 1506.00 6406.41 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
18. RPL13 ENSGALG00000006179 1498.00 6372.38 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
19. RPSA 1478.00 6287.30 ribosomal protein SA
20. MT-ATP6 MT-ATP6 1449.00 6163.94
21. RPS4 RPS4 1419.00 6036.32
22. RPL23A ENSGALG00000003966 1418.00 6032.07 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
23. RPL32 ENSGALG00000027142 1313.00 5585.40 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
24. PPIA ENSGALG00000028600 1303.00 5542.86 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
25. RPL35 ENSGALG00000035677 1300.00 5530.10 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
26. RPL19 ENSGALG00000001658 1281.00 5449.28 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
27. RPS14 ENSGALG00000004588 1234.00 5249.34 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
28. RPL6 ENSGALG00000004818 1196.00 5087.69 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
29. RPS28 ENSGALG00000024398 1185.00 5040.90 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
30. MT-ND3 MT-ND3 1184.00 5036.65
31. MT-ND5 MT-ND5 1177.00 5006.87
32. RPL27A ENSGALG00000005948 1162.00 4943.06 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. HBE 1120.00 4764.40 hemoglobin subunit epsilon
34. RPL7A ENSGALG00000003197 1113.00 4734.62 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
35. RPS11 ENSGALG00000017299 1087.00 4624.02 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
36. RPS21 ENSGALG00000005338 1063.00 4521.92 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. RPS15A ENSGALG00000006771 1050.00 4466.62 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPL24 ENSGALG00000015339 1047.00 4453.86 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
39. MT-ND1 MT-ND1 1038.00 4415.57
40. RPL29 ENSGALG00000026978 1006.00 4279.45 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. RPL27 ENSGALG00000002837 978.00 4160.34 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
42. RPL12 ENSGALG00000008806 965.00 4105.04 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
43. RPL18A 960.00 4083.77 ribosomal protein L18a
44. RPS23 ENSGALG00000015617 934.00 3973.17 ribosomal protein S23
45. RPL26 RPL26 930.00 3956.15
46. RPS12 ENSGALG00000013990 926.00 3939.13 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
47. RPL38 ENSGALG00000001465 917.00 3900.85 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
48. MT-ND4 MT-ND4 894.00 3803.01
49. RPL14 ENSGALG00000043379 880.00 3743.45 ribosomal protein L14
50. RPL36 ENSGALG00000000474 879.00 3739.20 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
51. RPL37A ENSGALG00000011472 867.00 3688.15 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
52. RPS27A ENSGALG00000036790 866.00 3683.90 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
53. SNRPD1 ENSGALG00000041334 848.00 3607.33 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
54. RPS16 ENSGALG00000026490 844.00 3590.31 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPL8 ENSGALG00000016232 831.00 3535.01 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
56. RPS7 ENSGALG00000016392 814.00 3462.70 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. MT-ND6 MT-ND6 806.00 3428.66
58. RPS3A ENSGALG00000010077 803.00 3415.90 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
59. RPL36AL ENSGALG00000004952 774.00 3292.54 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
60. NME2 ENSGALG00000002932 773.00 3288.28 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
61. RPL5 ENSGALG00000005922 769.00 3271.27 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
62. CIRBP ENSGALG00000030918 762.00 3241.49 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
63. GNB2L1 ENSGALG00000000122 760.00 3232.98 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
64. ANP32B ENSGALG00000037483 751.00 3194.70 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
65. RPS13 ENSGALG00000006096 745.00 3169.17 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
66. RPL7 ENSGALG00000035252 742.00 3156.41 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
67. RPL21 ENSGALG00000027035 725.00 3084.10 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
68. MT-CYB MT-CYB 714.00 3037.30
69. MDK ENSGALG00000008367 684.00 2909.68 midkine [Source:NCBI gene;Acc:423196]
70. ENSGALG00000028992 ENSGALG00000028992 631.00 2684.23
71. RPS25 ENSGALG00000007699 631.00 2684.23 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
72. RPL10A ENSGALG00000002644 629.00 2675.72 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
73. RPS20 ENSGALG00000014432 622.00 2645.94 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
74. TCEB3 ENSGALG00000034625 622.00 2645.94 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
75. RPS17 ENSGALG00000002157 619.00 2633.18 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. RPS6 ENSGALG00000015082 616.00 2620.42 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
77. UBB ENSGALG00000004509 608.00 2586.39 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
78. ALDOC ENSGALG00000026077 592.00 2518.32 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
79. TMSB4X ENSGALG00000026383 581.00 2471.53 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
80. RPS3 ENSGALG00000017330 579.00 2463.02 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
81. RPS24 ENSGALG00000004871 567.00 2411.98 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
82. ENO1 ENSGALG00000002377 556.00 2365.18 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
83. PRDX1 ENSGALG00000010243 555.00 2360.93 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
84. MT-CO1 MT-CO1 549.00 2335.40
85. EEF1D 546.00 2322.64 eukaryotic translation elongation factor 1 delta, transcript variant X13
86. HMGN2 HMGN2 535.00 2275.85
87. LDHB ENSGALG00000035836 504.00 2143.98 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
88. STMN1 ENSGALG00000001475 502.00 2135.47 stathmin 1 [Source:NCBI gene;Acc:396057]
89. RPL23 ENSGALG00000001634 476.00 2024.87 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
90. EIF5A2 ENSGALG00000009309 465.00 1978.08 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
91. ENSGALG00000028649 ENSGALG00000028649 451.00 1918.52
92. CRHOA CRHOA 447.00 1901.50
93. ATP5G3 443.00 1884.49 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
94. PKM ENSGALG00000001992 442.00 1880.23 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
95. RPL37 ENSGALG00000014833 437.00 1858.97 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
96. FTH FTH 432.00 1837.70
97. RPLP2 ENSGALG00000034811 406.00 1727.09 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
98. ENSGALG00000018384 ENSGALG00000018384 404.00 1718.59
99. SLC25A6_1 ENSGALG00000016691 396.00 1684.55 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
100. RAN ENSGALG00000002569 395.00 1680.30 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA