Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s34.

Sample reads: 235,039. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5529.00 23525.36
2. EEF1A EEF1A 2411.00 10258.57
3. RPL35A ENSGALG00000007611, ENSGALG00000041230 2398.00 10203.26 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
4. RPLP0 ENSGALG00000023294 2398.00 10203.26 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. gga-mir-3533 ENSGALG00000027736 2372.00 10092.63 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. RPS10 ENSGALG00000002813 2347.00 9986.26 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. RPS15 ENSGALG00000015195 2046.00 8705.53 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. gga-mir-3527 gga-mir-3527 2009.00 8548.10
9. HBZ ENSGALG00000023740 1993.00 8480.02 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
10. RPS29 ENSGALG00000012229 1913.00 8139.63 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. RPL4 ENSGALG00000007711 1840.00 7829.02 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPL13 ENSGALG00000006179 1768.00 7522.67 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
13. GAPDH ENSGALG00000014442 1702.00 7241.84 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. RPL23A ENSGALG00000003966 1696.00 7216.31 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. RPS2 ENSGALG00000005490 1583.00 6735.51 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
16. HBG1 HBG1 1565.00 6658.92
17. RPS8 ENSGALG00000010124 1450.00 6169.61 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
18. RPL35 ENSGALG00000035677 1412.00 6007.92 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
19. RPL15 ENSGALG00000011290 1329.00 5654.77 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. MT-ATP6 MT-ATP6 1318.00 5607.96
21. RPS4 RPS4 1312.00 5582.43
22. MT-ND3 MT-ND3 1297.00 5518.61
23. RPL19 ENSGALG00000001658 1281.00 5450.53 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
24. RPLP1 ENSGALG00000030878 1280.00 5446.28 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. RPL27A ENSGALG00000005948 1251.00 5322.88 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
26. RPSA 1243.00 5288.84 ribosomal protein SA
27. RPL29 ENSGALG00000026978 1236.00 5259.06 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
28. RPL7A ENSGALG00000003197 1232.00 5242.04 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
29. RPS15A ENSGALG00000006771 1230.00 5233.53 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPL36 ENSGALG00000000474 1217.00 5178.22 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
31. RPS21 ENSGALG00000005338 1201.00 5110.14 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
32. RPS14 ENSGALG00000004588 1181.00 5025.04 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
33. RPL6 ENSGALG00000004818 1174.00 4995.26 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
34. RPL32 ENSGALG00000027142 1169.00 4973.98 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
35. RPS28 ENSGALG00000024398 1131.00 4812.29 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
36. RPL38 ENSGALG00000001465 1117.00 4752.73 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
37. RPL24 ENSGALG00000015339 1115.00 4744.22 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
38. RPL18A 1099.00 4676.14 ribosomal protein L18a
39. RPL27 ENSGALG00000002837 1064.00 4527.22 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
40. MT-ND1 MT-ND1 1032.00 4391.06
41. HBE 1009.00 4293.20 hemoglobin subunit epsilon
42. MT-ND5 MT-ND5 990.00 4212.35
43. RPS16 ENSGALG00000026490 967.00 4114.49 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. SNRPD1 ENSGALG00000041334 946.00 4025.14 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
45. RPS12 ENSGALG00000013990 939.00 3995.35 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
46. PPIA ENSGALG00000028600 926.00 3940.04 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
47. RPS23 ENSGALG00000015617 925.00 3935.79 ribosomal protein S23
48. RPL37A ENSGALG00000011472 909.00 3867.71 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
49. RPL7 ENSGALG00000035252 903.00 3842.18 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
50. RPS3A ENSGALG00000010077 869.00 3697.51 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
51. RPS7 ENSGALG00000016392 862.00 3667.73 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
52. RPS11 ENSGALG00000017299 856.00 3642.20 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
53. RPL36AL ENSGALG00000004952 842.00 3582.63 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
54. RPS27A ENSGALG00000036790 839.00 3569.86 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
55. MT-ND4 MT-ND4 830.00 3531.57
56. RPL26 RPL26 814.00 3463.49
57. RPL12 ENSGALG00000008806 801.00 3408.18 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
58. RPL14 ENSGALG00000043379 801.00 3408.18 ribosomal protein L14
59. CIRBP ENSGALG00000030918 791.00 3365.63 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
60. RPL8 ENSGALG00000016232 789.00 3357.12 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
61. TCEB3 ENSGALG00000034625 773.00 3289.04 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
62. RPL5 ENSGALG00000005922 772.00 3284.78 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
63. RPL21 ENSGALG00000027035 751.00 3195.43 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
64. RPS25 ENSGALG00000007699 737.00 3135.86 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
65. RPS24 ENSGALG00000004871 724.00 3080.55 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
66. GNB2L1 ENSGALG00000000122 721.00 3067.78 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
67. ANP32B ENSGALG00000037483 719.00 3059.28 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
68. NME2 ENSGALG00000002932 699.00 2974.18 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
69. PRDX1 ENSGALG00000010243 693.00 2948.65 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
70. RPS17 ENSGALG00000002157 680.00 2893.33 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
71. MT-CYB MT-CYB 664.00 2825.26
72. RPL23 ENSGALG00000001634 648.00 2757.18 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
73. LDHB ENSGALG00000035836 645.00 2744.41 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
74. TMSB4X ENSGALG00000026383 642.00 2731.65 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
75. UBB ENSGALG00000004509 629.00 2676.33 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
76. RPS13 ENSGALG00000006096 628.00 2672.08 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
77. EEF1D 613.00 2608.26 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. ENO1 ENSGALG00000002377 585.00 2489.12 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
79. RPS3 ENSGALG00000017330 563.00 2395.51 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
80. MT-CO1 MT-CO1 542.00 2306.16
81. EIF5A2 ENSGALG00000009309 540.00 2297.65 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
82. RPS6 ENSGALG00000015082 540.00 2297.65 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
83. CRHOA CRHOA 534.00 2272.12
84. RPL10A ENSGALG00000002644 529.00 2250.84 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
85. ATP5G3 520.00 2212.55 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
86. RPS20 ENSGALG00000014432 510.00 2170.00 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
87. HMGN2 HMGN2 505.00 2148.73
88. MDK ENSGALG00000008367 488.00 2076.39 midkine [Source:NCBI gene;Acc:423196]
89. DYL1 ENSGALG00000007153 486.00 2067.88 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
90. RPL31 ENSGALG00000016775 464.00 1974.27 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
91. STMN1 ENSGALG00000001475 464.00 1974.27 stathmin 1 [Source:NCBI gene;Acc:396057]
92. ENSGALG00000028992 ENSGALG00000028992 459.00 1953.00
93. RAN ENSGALG00000002569 450.00 1914.71 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
94. RPL37 ENSGALG00000014833 437.00 1859.39 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
95. ENSGALG00000018384 ENSGALG00000018384 421.00 1791.31
96. FTH FTH 403.00 1714.73
97. ATP5L ENSGALG00000006899 396.00 1684.94 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
98. SLC25A6_1 ENSGALG00000016691 386.00 1642.39 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
99. EIF1 ENSGALG00000028517 361.00 1536.02 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
100. EIF4G2 ENSGALG00000005587 361.00 1536.02 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA