Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s33.

Sample reads: 235,987. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5878.00 24910.37
2. RPLP0 ENSGALG00000023294 3041.00 12887.45 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2760.00 11696.60 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPS10 ENSGALG00000002813 2345.00 9937.87 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
5. gga-mir-3527 gga-mir-3527 2256.00 9560.70
6. RPS29 ENSGALG00000012229 2179.00 9234.38 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
7. MT-ATP6 MT-ATP6 2120.00 8984.35
8. RPS15 ENSGALG00000015195 2088.00 8848.73 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
9. EEF1A EEF1A 2045.00 8666.50
10. GAPDH ENSGALG00000014442 1982.00 8399.52 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. RPL4 ENSGALG00000007711 1918.00 8128.29 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPL35A ENSGALG00000007611, ENSGALG00000041230 1805.00 7649.41 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
13. RPL13 ENSGALG00000006179 1661.00 7039.15 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
14. RPS2 ENSGALG00000005490 1593.00 6750.97 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
15. RPL15 ENSGALG00000011290 1479.00 6267.85 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
16. RPS8 ENSGALG00000010124 1458.00 6178.86 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
17. RPL23A ENSGALG00000003966 1451.00 6149.19 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
18. MT-ND5 MT-ND5 1443.00 6115.29
19. MT-ND1 MT-ND1 1396.00 5916.11
20. HBZ ENSGALG00000023740 1374.00 5822.87 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
21. RPSA 1340.00 5678.78 ribosomal protein SA
22. RPS28 ENSGALG00000024398 1289.00 5462.65 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
23. RPS4 RPS4 1261.00 5343.99
24. RPLP1 ENSGALG00000030878 1254.00 5314.32 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. MT-ND3 MT-ND3 1217.00 5157.52
26. PPIA ENSGALG00000028600 1217.00 5157.52 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
27. RPL35 ENSGALG00000035677 1202.00 5093.95 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
28. RPL6 ENSGALG00000004818 1193.00 5055.81 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
29. RPL24 ENSGALG00000015339 1106.00 4687.12 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
30. RPS14 ENSGALG00000004588 1100.00 4661.69 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
31. RPL18A 1096.00 4644.74 ribosomal protein L18a
32. HBG1 HBG1 1082.00 4585.41
33. RPS15A ENSGALG00000006771 1072.00 4543.03 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
34. RPL19 ENSGALG00000001658 1071.00 4538.79 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
35. RPL7A ENSGALG00000003197 1065.00 4513.36 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. MT-ND4 MT-ND4 1062.00 4500.65
37. RPL32 ENSGALG00000027142 1042.00 4415.89 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
38. RPL27A ENSGALG00000005948 996.00 4220.95 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
39. SNRPD1 ENSGALG00000041334 964.00 4085.33 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
40. RPS21 ENSGALG00000005338 953.00 4038.72 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
41. MT-CYB MT-CYB 938.00 3975.15
42. RPL27 ENSGALG00000002837 932.00 3949.72 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. RPL29 ENSGALG00000026978 920.00 3898.87 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. RPL12 ENSGALG00000008806 905.00 3835.30 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
45. RPL36 ENSGALG00000000474 900.00 3814.11 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
46. RPS11 ENSGALG00000017299 886.00 3754.78 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
47. GNB2L1 ENSGALG00000000122 876.00 3712.40 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
48. RPL21 ENSGALG00000027035 876.00 3712.40 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
49. RPS23 ENSGALG00000015617 847.00 3589.50 ribosomal protein S23
50. RPS27A ENSGALG00000036790 836.00 3542.88 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
51. RPL38 ENSGALG00000001465 816.00 3458.13 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
52. MT-ND6 MT-ND6 809.00 3428.46
53. RPL26 RPL26 803.00 3403.03
54. CIRBP ENSGALG00000030918 801.00 3394.56 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
55. RPS12 ENSGALG00000013990 795.00 3369.13 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
56. RPS3A ENSGALG00000010077 773.00 3275.90 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
57. RPS16 ENSGALG00000026490 767.00 3250.47 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
58. ANP32B ENSGALG00000037483 765.00 3241.99 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
59. RPL7 ENSGALG00000035252 762.00 3229.28 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
60. RPL8 ENSGALG00000016232 754.00 3195.38 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
61. RPS7 ENSGALG00000016392 749.00 3174.19 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPL37A ENSGALG00000011472 744.00 3153.00 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. RPL36AL ENSGALG00000004952 733.00 3106.38 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
64. RPL14 ENSGALG00000043379 720.00 3051.29 ribosomal protein L14
65. NME2 ENSGALG00000002932 718.00 3042.81 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
66. HBE 700.00 2966.53 hemoglobin subunit epsilon
67. MDK ENSGALG00000008367 688.00 2915.67 midkine [Source:NCBI gene;Acc:423196]
68. MT-CO1 MT-CO1 683.00 2894.48
69. RPS25 ENSGALG00000007699 673.00 2852.11 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
70. RPL5 ENSGALG00000005922 671.00 2843.63 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
71. RPL10A ENSGALG00000002644 661.00 2801.25 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
72. ALDOC ENSGALG00000026077 654.00 2771.59 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
73. RPS13 ENSGALG00000006096 628.00 2661.40 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
74. PRDX1 ENSGALG00000010243 608.00 2576.64 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
75. LDHB ENSGALG00000035836 596.00 2525.79 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
76. HMGN2 HMGN2 595.00 2521.55
77. MMP15 ENSGALG00000038758 592.00 2508.84 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
78. RPL23 ENSGALG00000001634 587.00 2487.65 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
79. TCEB3 ENSGALG00000034625 581.00 2462.22 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
80. ENSGALG00000018384 ENSGALG00000018384 564.00 2390.17
81. FTH FTH 552.00 2339.32
82. EEF1D 549.00 2326.61 eukaryotic translation elongation factor 1 delta, transcript variant X13
83. PKM ENSGALG00000001992 546.00 2313.89 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
84. RPS17 ENSGALG00000002157 526.00 2229.13 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
85. UBB ENSGALG00000004509 520.00 2203.71 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
86. RPS24 ENSGALG00000004871 518.00 2195.23 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
87. EIF5A2 ENSGALG00000009309 515.00 2182.52 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
88. ENSGALG00000028649 ENSGALG00000028649 493.00 2089.28
89. RPS20 ENSGALG00000014432 493.00 2089.28 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
90. ENO1 ENSGALG00000002377 486.00 2059.62 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
91. RPS6 ENSGALG00000015082 486.00 2059.62 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
92. ENSGALG00000028992 ENSGALG00000028992 482.00 2042.67
93. RPS3 ENSGALG00000017330 476.00 2017.24 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
94. TMSB4X ENSGALG00000026383 468.00 1983.34 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
95. STMN1 ENSGALG00000001475 453.00 1919.77 stathmin 1 [Source:NCBI gene;Acc:396057]
96. ATP5G3 443.00 1877.39 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
97. RPL37 ENSGALG00000014833 419.00 1775.68 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
98. RPL31 ENSGALG00000016775 416.00 1762.97 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
99. HMGN5 ENSGALG00000007131 407.00 1724.82 high mobility group nucleosome binding domain 5, transcript variant X1
100. ENSGALG00000022570 ENSGALG00000022570 390.00 1652.78
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA