Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s32.

Sample reads: 235,389. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6181.00 26260.33
2. RPLP0 ENSGALG00000023294 2941.00 12495.01 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2670.00 11343.65 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPS10 ENSGALG00000002813 2257.00 9588.99 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
5. EEF1A EEF1A 2189.00 9300.09
6. GAPDH ENSGALG00000014442 2098.00 8913.47 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
7. RPS29 ENSGALG00000012229 2050.00 8709.54 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 2039.00 8662.81 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. gga-mir-3527 gga-mir-3527 1986.00 8437.64
10. RPS15 ENSGALG00000015195 1876.00 7970.29 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
11. HBZ ENSGALG00000023740 1870.00 7944.80 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
12. RPL4 ENSGALG00000007711 1795.00 7626.16 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. RPL15 ENSGALG00000011290 1744.00 7409.48 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
14. RPL13 ENSGALG00000006179 1667.00 7082.35 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
15. MT-ATP6 MT-ATP6 1597.00 6784.95
16. HBG1 HBG1 1582.00 6721.22
17. RPS2 ENSGALG00000005490 1555.00 6606.51 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
18. PPIA ENSGALG00000028600 1551.00 6589.51 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
19. RPL23A ENSGALG00000003966 1432.00 6083.93 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
20. RPSA 1381.00 5867.26 ribosomal protein SA
21. RPS4 RPS4 1375.00 5841.77
22. MT-ND1 MT-ND1 1340.00 5693.07
23. RPS14 ENSGALG00000004588 1320.00 5608.10 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
24. RPS8 ENSGALG00000010124 1289.00 5476.39 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
25. MT-ND3 MT-ND3 1252.00 5319.19
26. RPL24 ENSGALG00000015339 1210.00 5140.75 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
27. RPL35 ENSGALG00000035677 1210.00 5140.75 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
28. RPL32 ENSGALG00000027142 1197.00 5085.52 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
29. RPLP1 ENSGALG00000030878 1192.00 5064.28 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
30. HBE 1181.00 5017.55 hemoglobin subunit epsilon
31. RPL27A ENSGALG00000005948 1181.00 5017.55 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
32. RPL19 ENSGALG00000001658 1142.00 4851.85 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
33. RPS28 ENSGALG00000024398 1135.00 4822.11 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
34. MT-ND4 MT-ND4 1133.00 4813.62
35. RPL6 ENSGALG00000004818 1111.00 4720.15 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
36. RPS15A ENSGALG00000006771 1104.00 4690.41 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
37. MT-ND5 MT-ND5 1087.00 4618.18
38. RPL7A ENSGALG00000003197 1045.00 4439.74 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
39. RPL27 ENSGALG00000002837 972.00 4129.60 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
40. RPL29 ENSGALG00000026978 972.00 4129.60 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. RPS21 ENSGALG00000005338 952.00 4044.63 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
42. RPL18A 933.00 3963.90 ribosomal protein L18a
43. RPL36 ENSGALG00000000474 933.00 3963.90 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
44. SNRPD1 ENSGALG00000041334 933.00 3963.90 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
45. RPS11 ENSGALG00000017299 908.00 3857.69 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
46. RPS27A ENSGALG00000036790 873.00 3708.99 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
47. GNB2L1 ENSGALG00000000122 869.00 3692.00 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
48. RPS3A ENSGALG00000010077 869.00 3692.00 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
49. RPL38 ENSGALG00000001465 867.00 3683.50 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
50. CIRBP ENSGALG00000030918 864.00 3670.75 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
51. RPL7 ENSGALG00000035252 864.00 3670.75 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
52. RPL12 ENSGALG00000008806 851.00 3615.52 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
53. MT-CYB MT-CYB 840.00 3568.79
54. RPS23 ENSGALG00000015617 834.00 3543.30 ribosomal protein S23
55. RPL26 RPL26 825.00 3505.06
56. RPL8 ENSGALG00000016232 823.00 3496.56 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
57. NME2 ENSGALG00000002932 812.00 3449.83 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
58. RPS16 ENSGALG00000026490 805.00 3420.09 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
59. ANP32B ENSGALG00000037483 785.00 3335.12 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
60. RPL36AL ENSGALG00000004952 772.00 3279.89 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
61. RPS7 ENSGALG00000016392 735.00 3122.69 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPL37A ENSGALG00000011472 684.00 2906.01 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. TCEB3 ENSGALG00000034625 684.00 2906.01 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
64. RPL14 ENSGALG00000043379 677.00 2876.27 ribosomal protein L14
65. RPS12 ENSGALG00000013990 677.00 2876.27 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
66. MT-ND6 MT-ND6 673.00 2859.28
67. RPS13 ENSGALG00000006096 671.00 2850.78 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
68. PRDX1 ENSGALG00000010243 658.00 2795.55 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
69. ENO1 ENSGALG00000002377 647.00 2748.82 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
70. RPL21 ENSGALG00000027035 647.00 2748.82 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
71. RPL5 ENSGALG00000005922 638.00 2710.58 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
72. MT-CO1 MT-CO1 627.00 2663.85
73. RPS25 ENSGALG00000007699 607.00 2578.87 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
74. RPS24 ENSGALG00000004871 603.00 2561.88 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
75. RPL10A ENSGALG00000002644 601.00 2553.38 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
76. RPS3 ENSGALG00000017330 592.00 2515.15 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
77. EEF1D 585.00 2485.41 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. ALDOC ENSGALG00000026077 579.00 2459.91 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
79. RPL23 ENSGALG00000001634 579.00 2459.91 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
80. RPS17 ENSGALG00000002157 572.00 2430.17 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
81. UBB ENSGALG00000004509 550.00 2336.71 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
82. HMGN2 HMGN2 539.00 2289.97
83. LDHB ENSGALG00000035836 530.00 2251.74 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
84. EIF5A2 ENSGALG00000009309 519.00 2205.00 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
85. TMSB4X ENSGALG00000026383 515.00 2188.01 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
86. RPS20 ENSGALG00000014432 504.00 2141.27 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
87. FTH FTH 499.00 2120.03
88. ENSGALG00000028649 ENSGALG00000028649 482.00 2047.80
89. PKM ENSGALG00000001992 482.00 2047.80 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
90. ENSGALG00000028992 ENSGALG00000028992 480.00 2039.31
91. MMP15 ENSGALG00000038758 477.00 2026.56 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
92. ATP5G3 473.00 2009.57 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
93. STMN1 ENSGALG00000001475 469.00 1992.57 stathmin 1 [Source:NCBI gene;Acc:396057]
94. MDK ENSGALG00000008367 458.00 1945.84 midkine [Source:NCBI gene;Acc:423196]
95. RPS6 ENSGALG00000015082 455.00 1933.09 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
96. CRHOA CRHOA 416.00 1767.40
97. RPL37 ENSGALG00000014833 411.00 1746.16 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
98. ENSGALG00000018384 ENSGALG00000018384 405.00 1720.67
99. CHCHD2 ENSGALG00000002495 400.00 1699.42 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
100. ENSGALG00000022570 ENSGALG00000022570 389.00 1652.69
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA