Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s31.

Sample reads: 235,844. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HBZ ENSGALG00000023740 5709.00 24208.63 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
2. MT-CO3 MT-CO3 5395.00 22877.13
3. HBG1 HBG1 3650.00 15477.58
4. RPLP0 ENSGALG00000023294 3254.00 13798.37 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. gga-mir-3533 ENSGALG00000027736 2597.00 11012.40 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
6. RPS15 ENSGALG00000015195 2427.00 10291.53 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
7. HBE 2292.00 9719.07 hemoglobin subunit epsilon
8. RPS10 ENSGALG00000002813 2276.00 9651.22 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPL35A ENSGALG00000007611, ENSGALG00000041230 2257.00 9570.66 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
10. RPS29 ENSGALG00000012229 2136.00 9057.56 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. RPL4 ENSGALG00000007711 2059.00 8731.05 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPL13 ENSGALG00000006179 1927.00 8171.31 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
13. gga-mir-3527 gga-mir-3527 1852.00 7853.28
14. GAPDH ENSGALG00000014442 1829.00 7755.75 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPL23A ENSGALG00000003966 1701.00 7212.98 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
16. EEF1A EEF1A 1665.00 7060.32
17. RPS2 ENSGALG00000005490 1600.00 6784.69 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
18. RPS4 RPS4 1572.00 6665.96
19. RPS8 ENSGALG00000010124 1559.00 6610.83 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
20. RPL15 ENSGALG00000011290 1430.00 6063.82 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
21. MT-ATP6 MT-ATP6 1400.00 5936.61
22. RPSA 1366.00 5792.43 ribosomal protein SA
23. RPL35 ENSGALG00000035677 1350.00 5724.58 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
24. MT-ND1 MT-ND1 1329.00 5635.53
25. RPS28 ENSGALG00000024398 1305.00 5533.76 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
26. RPS15A ENSGALG00000006771 1215.00 5152.13 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
27. PPIA ENSGALG00000028600 1210.00 5130.92 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
28. RPLP1 ENSGALG00000030878 1198.00 5080.04 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
29. MT-ND3 MT-ND3 1187.00 5033.39
30. RPL19 ENSGALG00000001658 1180.00 5003.71 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
31. RPS14 ENSGALG00000004588 1167.00 4948.58 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
32. RPL27A ENSGALG00000005948 1128.00 4783.21 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPL36 ENSGALG00000000474 1098.00 4655.99 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
34. SNRPD1 ENSGALG00000041334 1083.00 4592.39 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
35. RPS21 ENSGALG00000005338 1081.00 4583.91 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
36. RPL7A ENSGALG00000003197 1073.00 4549.98 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
37. RPS12 ENSGALG00000013990 1025.00 4346.44 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
38. RPL24 ENSGALG00000015339 1023.00 4337.96 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
39. RPL27 ENSGALG00000002837 1006.00 4265.88 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
40. RPL32 ENSGALG00000027142 976.00 4138.66 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
41. RPL6 ENSGALG00000004818 969.00 4108.98 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
42. RPL18A 950.00 4028.41 ribosomal protein L18a
43. RPL26 RPL26 941.00 3990.25
44. RPS23 ENSGALG00000015617 928.00 3935.12 ribosomal protein S23
45. MT-ND5 MT-ND5 918.00 3892.72
46. RPL12 ENSGALG00000008806 902.00 3824.87 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
47. MT-ND4 MT-ND4 890.00 3773.98
48. RPL29 ENSGALG00000026978 879.00 3727.34 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
49. RPL38 ENSGALG00000001465 853.00 3617.09 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
50. RPL8 ENSGALG00000016232 846.00 3587.41 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
51. RPS16 ENSGALG00000026490 833.00 3532.28 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. CIRBP ENSGALG00000030918 818.00 3468.67 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
53. RPL14 ENSGALG00000043379 810.00 3434.75 ribosomal protein L14
54. RPS7 ENSGALG00000016392 805.00 3413.55 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. RPS3A ENSGALG00000010077 797.00 3379.62 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
56. RPL36AL ENSGALG00000004952 762.00 3231.21 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
57. RPS27A ENSGALG00000036790 754.00 3197.29 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
58. ANP32B ENSGALG00000037483 730.00 3095.52 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
59. TMSB4X ENSGALG00000026383 728.00 3087.03 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
60. GNB2L1 ENSGALG00000000122 717.00 3040.39 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
61. RPL7 ENSGALG00000035252 717.00 3040.39 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
62. RPL21 ENSGALG00000027035 709.00 3006.47 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
63. MT-CYB MT-CYB 685.00 2904.70
64. RPS11 ENSGALG00000017299 659.00 2794.45 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
65. RPL37A ENSGALG00000011472 648.00 2747.80 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
66. RPS13 ENSGALG00000006096 646.00 2739.32 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
67. MT-CO1 MT-CO1 644.00 2730.84
68. ENO1 ENSGALG00000002377 642.00 2722.36 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
69. PRDX1 ENSGALG00000010243 637.00 2701.16 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
70. RPL5 ENSGALG00000005922 633.00 2684.19 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
71. TCEB3 ENSGALG00000034625 631.00 2675.71 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. RPS25 ENSGALG00000007699 627.00 2658.75 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. NME2 ENSGALG00000002932 603.00 2556.98 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
74. RPL10A ENSGALG00000002644 597.00 2531.54 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
75. ALDOC ENSGALG00000026077 582.00 2467.93 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
76. RPS24 ENSGALG00000004871 560.00 2374.64 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
77. EEF1D 543.00 2302.55 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. MDK ENSGALG00000008367 543.00 2302.55 midkine [Source:NCBI gene;Acc:423196]
79. UBB ENSGALG00000004509 539.00 2285.59 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
80. RPL23 ENSGALG00000001634 523.00 2217.75 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
81. ENSGALG00000028992 ENSGALG00000028992 517.00 2192.30
82. RPS17 ENSGALG00000002157 506.00 2145.66 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
83. MT-ND6 MT-ND6 504.00 2137.18
84. EIF5A2 ENSGALG00000009309 491.00 2082.05 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
85. RPS3 ENSGALG00000017330 487.00 2065.09 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
86. HMGN2 HMGN2 480.00 2035.41
87. RAN ENSGALG00000002569 478.00 2026.93 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
88. LDHB ENSGALG00000035836 472.00 2001.48 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
89. FTH FTH 455.00 1929.40
90. CRHOA CRHOA 452.00 1916.68
91. MMP15 ENSGALG00000038758 437.00 1853.07 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
92. RPL37 ENSGALG00000014833 426.00 1806.42 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
93. ATP5G3 418.00 1772.50 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
94. PKM ENSGALG00000001992 416.00 1764.02 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
95. DYL1 ENSGALG00000007153 413.00 1751.30 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
96. RPS20 ENSGALG00000014432 405.00 1717.38 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
97. RPS6 ENSGALG00000015082 401.00 1700.41 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
98. STMN1 ENSGALG00000001475 401.00 1700.41 stathmin 1 [Source:NCBI gene;Acc:396057]
99. RPL31 ENSGALG00000016775 398.00 1687.69 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
100. ENSGALG00000022570 ENSGALG00000022570 394.00 1670.73
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA