Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s30.

Sample reads: 235,307. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5964.00 25347.66
2. RPLP0 ENSGALG00000023294 3168.00 13464.35 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2774.00 11789.81 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPS15 ENSGALG00000015195 2314.00 9834.76 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
5. MT-ATP6 MT-ATP6 2226.00 9460.75
6. GAPDH ENSGALG00000014442 2207.00 9379.99 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 2190.00 9307.74 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. gga-mir-3527 gga-mir-3527 2117.00 8997.48
9. RPL4 ENSGALG00000007711 2006.00 8525.72 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
10. RPS10 ENSGALG00000002813 1986.00 8440.72 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
11. EEF1A EEF1A 1890.00 8032.71
12. RPS29 ENSGALG00000012229 1843.00 7832.95 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
13. MT-ND5 MT-ND5 1792.00 7616.20
14. RPL13 ENSGALG00000006179 1593.00 6770.43 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
15. RPS2 ENSGALG00000005490 1578.00 6706.67 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
16. RPS8 ENSGALG00000010124 1548.00 6579.17 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
17. RPL15 ENSGALG00000011290 1528.00 6494.17 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
18. RPS28 ENSGALG00000024398 1486.00 6315.66 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
19. MT-ND1 MT-ND1 1402.00 5958.65
20. RPSA 1391.00 5911.90 ribosomal protein SA
21. RPS4 RPS4 1374.00 5839.65
22. PPIA ENSGALG00000028600 1344.00 5712.15 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
23. RPL23A ENSGALG00000003966 1338.00 5686.65 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
24. RPLP1 ENSGALG00000030878 1329.00 5648.40 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. HBZ ENSGALG00000023740 1293.00 5495.39 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
26. RPL6 ENSGALG00000004818 1252.00 5321.14 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
27. RPL19 ENSGALG00000001658 1188.00 5049.13 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
28. RPL35 ENSGALG00000035677 1173.00 4985.38 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
29. RPL27A ENSGALG00000005948 1167.00 4959.88 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. RPL32 ENSGALG00000027142 1137.00 4832.38 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
31. HBG1 HBG1 1124.00 4777.12
32. MT-ND4 MT-ND4 1120.00 4760.12
33. SNRPD1 ENSGALG00000041334 1096.00 4658.12 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
34. RPS15A ENSGALG00000006771 1064.00 4522.12 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPL38 ENSGALG00000001465 1042.00 4428.62 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
36. RPL7A ENSGALG00000003197 1040.00 4420.11 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
37. MT-ND3 MT-ND3 1015.00 4313.86
38. RPL24 ENSGALG00000015339 1000.00 4250.11 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
39. RPS14 ENSGALG00000004588 993.00 4220.36 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
40. RPL36 ENSGALG00000000474 980.00 4165.11 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
41. RPL18A 961.00 4084.36 ribosomal protein L18a
42. RPL27 ENSGALG00000002837 953.00 4050.36 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. RPS12 ENSGALG00000013990 946.00 4020.60 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
44. RPL29 ENSGALG00000026978 923.00 3922.85 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
45. RPS21 ENSGALG00000005338 905.00 3846.35 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
46. RPL12 ENSGALG00000008806 890.00 3782.60 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
47. MT-ND6 MT-ND6 865.00 3676.35
48. MT-CYB MT-CYB 854.00 3629.59
49. RPS23 ENSGALG00000015617 854.00 3629.59 ribosomal protein S23
50. RPL8 ENSGALG00000016232 839.00 3565.84 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
51. RPL26 RPL26 826.00 3510.59
52. RPS11 ENSGALG00000017299 824.00 3502.09 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
53. RPS27A ENSGALG00000036790 781.00 3319.34 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. GNB2L1 ENSGALG00000000122 777.00 3302.34 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
55. HMGN2 HMGN2 775.00 3293.84
56. RPS7 ENSGALG00000016392 760.00 3230.08 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. RPS16 ENSGALG00000026490 749.00 3183.33 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
58. CIRBP ENSGALG00000030918 736.00 3128.08 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
59. RPL21 ENSGALG00000027035 719.00 3055.83 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
60. RPS3A ENSGALG00000010077 719.00 3055.83 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
61. NME2 ENSGALG00000002932 715.00 3038.83 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
62. RPL36AL ENSGALG00000004952 715.00 3038.83 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
63. ANP32B ENSGALG00000037483 711.00 3021.83 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
64. RPL7 ENSGALG00000035252 694.00 2949.58 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
65. RPL37A ENSGALG00000011472 676.00 2873.07 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
66. MT-CO1 MT-CO1 666.00 2830.57
67. RPL5 ENSGALG00000005922 664.00 2822.07 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
68. HBE 657.00 2792.32 hemoglobin subunit epsilon
69. MDK ENSGALG00000008367 644.00 2737.07 midkine [Source:NCBI gene;Acc:423196]
70. RPS13 ENSGALG00000006096 638.00 2711.57 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
71. UBB ENSGALG00000004509 631.00 2681.82 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
72. RPL10A ENSGALG00000002644 629.00 2673.32 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
73. RPL14 ENSGALG00000043379 629.00 2673.32 ribosomal protein L14
74. RPS6 ENSGALG00000015082 614.00 2609.57 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
75. RPS17 ENSGALG00000002157 612.00 2601.07 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
76. ENSGALG00000028992 ENSGALG00000028992 604.00 2567.07
77. RPS25 ENSGALG00000007699 602.00 2558.57 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
78. EIF5A2 ENSGALG00000009309 576.00 2448.06 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
79. ENSGALG00000028649 ENSGALG00000028649 574.00 2439.56
80. TCEB3 ENSGALG00000034625 574.00 2439.56 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
81. ENO1 ENSGALG00000002377 567.00 2409.81 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
82. ALDOC ENSGALG00000026077 535.00 2273.81 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
83. PRDX1 ENSGALG00000010243 516.00 2193.06 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
84. RPS24 ENSGALG00000004871 516.00 2193.06 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
85. RPS3 ENSGALG00000017330 516.00 2193.06 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
86. EEF1D 501.00 2129.31 eukaryotic translation elongation factor 1 delta, transcript variant X13
87. RPL23 ENSGALG00000001634 482.00 2048.55 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
88. STMN1 ENSGALG00000001475 482.00 2048.55 stathmin 1 [Source:NCBI gene;Acc:396057]
89. RPS20 ENSGALG00000014432 479.00 2035.80 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
90. LDHB ENSGALG00000035836 475.00 2018.80 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. PKM ENSGALG00000001992 473.00 2010.30 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
92. ENSGALG00000018384 ENSGALG00000018384 467.00 1984.80
93. CRHOA CRHOA 445.00 1891.30
94. ATP5G3 415.00 1763.80 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
95. FTH FTH 409.00 1738.30
96. RPL31 ENSGALG00000016775 405.00 1721.29 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
97. TMSB4X ENSGALG00000026383 405.00 1721.29 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
98. ENSGALG00000022570 ENSGALG00000022570 364.00 1547.04
99. CHCHD2 ENSGALG00000002495 357.00 1517.29 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
100. RAN ENSGALG00000002569 349.00 1483.29 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA