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Experiment Chicken_E3_aorta, section s28.

Sample reads: 236,287. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4834.00 20458.95
2. RPLP0 ENSGALG00000023294 3089.00 13073.58 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2545.00 10771.21 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPS10 ENSGALG00000002813 2434.00 10301.42 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 2390.00 10115.20 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPS15 ENSGALG00000015195 2314.00 9793.55 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
7. RPL4 ENSGALG00000007711 2310.00 9776.62 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
8. RPL13 ENSGALG00000006179 2238.00 9471.89 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
9. GAPDH ENSGALG00000014442 2153.00 9112.15 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. RPS29 ENSGALG00000012229 2104.00 8904.76 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. gga-mir-3527 gga-mir-3527 2028.00 8583.11
12. RPS2 ENSGALG00000005490 1856.00 7855.15 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
13. RPL23A ENSGALG00000003966 1837.00 7774.74 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
14. RPL15 ENSGALG00000011290 1696.00 7177.99 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
15. EEF1A EEF1A 1628.00 6890.19
16. RPS4 RPS4 1576.00 6670.11
17. RPL35 ENSGALG00000035677 1524.00 6450.03 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
18. RPSA 1425.00 6031.03 ribosomal protein SA
19. MT-ATP6 MT-ATP6 1401.00 5929.46
20. MT-ND1 MT-ND1 1378.00 5832.11
21. HBZ ENSGALG00000023740 1360.00 5755.93 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
22. MT-ND3 MT-ND3 1360.00 5755.93
23. RPS8 ENSGALG00000010124 1358.00 5747.47 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
24. RPS15A ENSGALG00000006771 1284.00 5434.28 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. RPL19 ENSGALG00000001658 1262.00 5341.17 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. PPIA ENSGALG00000028600 1255.00 5311.54 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
27. RPS14 ENSGALG00000004588 1250.00 5290.38 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
28. RPS21 ENSGALG00000005338 1224.00 5180.34 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
29. RPL6 ENSGALG00000004818 1201.00 5083.00 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
30. RPL7A ENSGALG00000003197 1186.00 5019.51 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
31. RPL24 ENSGALG00000015339 1162.00 4917.94 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
32. RPL27A ENSGALG00000005948 1149.00 4862.92 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPLP1 ENSGALG00000030878 1143.00 4837.52 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
34. SNRPD1 ENSGALG00000041334 1127.00 4769.81 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
35. RPL32 ENSGALG00000027142 1118.00 4731.71 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
36. MT-ND5 MT-ND5 1104.00 4672.46
37. HBG1 HBG1 1091.00 4617.44
38. RPS12 ENSGALG00000013990 1057.00 4473.54 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
39. RPL36 ENSGALG00000000474 1041.00 4405.83 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
40. RPL29 ENSGALG00000026978 1039.00 4397.36 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. RPS23 ENSGALG00000015617 1034.00 4376.20 ribosomal protein S23
42. RPL27 ENSGALG00000002837 1029.00 4355.04 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
43. RPS28 ENSGALG00000024398 1008.00 4266.16 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
44. RPL18A 969.00 4101.10 ribosomal protein L18a
45. RPL12 ENSGALG00000008806 955.00 4041.85 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
46. CIRBP ENSGALG00000030918 934.00 3952.97 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
47. RPL38 ENSGALG00000001465 901.00 3813.30 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
48. RPS27A ENSGALG00000036790 896.00 3792.14 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
49. MT-ND4 MT-ND4 883.00 3737.12
50. RPL7 ENSGALG00000035252 869.00 3677.87 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
51. RPS3A ENSGALG00000010077 859.00 3635.55 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
52. RPS7 ENSGALG00000016392 855.00 3618.62 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
53. ANP32B ENSGALG00000037483 845.00 3576.30 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
54. RPL36AL ENSGALG00000004952 830.00 3512.81 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
55. GNB2L1 ENSGALG00000000122 822.00 3478.95 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
56. RPS16 ENSGALG00000026490 794.00 3360.45 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
57. MT-CYB MT-CYB 788.00 3335.05
58. RPL26 RPL26 779.00 3296.96
59. HBE 764.00 3233.48 hemoglobin subunit epsilon
60. RPL14 ENSGALG00000043379 757.00 3203.85 ribosomal protein L14
61. RPL8 ENSGALG00000016232 743.00 3144.60 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
62. RPL21 ENSGALG00000027035 735.00 3110.74 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
63. NME2 ENSGALG00000002932 717.00 3034.56 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
64. TCEB3 ENSGALG00000034625 706.00 2988.01 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
65. RPL37A ENSGALG00000011472 689.00 2916.06 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
66. ENO1 ENSGALG00000002377 687.00 2907.59 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
67. RPS13 ENSGALG00000006096 687.00 2907.59 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
68. PRDX1 ENSGALG00000010243 672.00 2844.11 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
69. RPL5 ENSGALG00000005922 670.00 2835.64 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
70. RPS11 ENSGALG00000017299 645.00 2729.84 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
71. RPS17 ENSGALG00000002157 640.00 2708.67 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
72. MDK ENSGALG00000008367 629.00 2662.12 midkine [Source:NCBI gene;Acc:423196]
73. RPL10A ENSGALG00000002644 622.00 2632.49 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
74. TMSB4X ENSGALG00000026383 605.00 2560.54 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
75. HMGN2 HMGN2 594.00 2513.99
76. RPL23 ENSGALG00000001634 594.00 2513.99 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
77. EIF5A2 ENSGALG00000009309 593.00 2509.76 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
78. RPS24 ENSGALG00000004871 591.00 2501.29 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
79. ALDOC ENSGALG00000026077 562.00 2378.55 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
80. MT-CO1 MT-CO1 562.00 2378.55
81. RPS25 ENSGALG00000007699 546.00 2310.84 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. RPS3 ENSGALG00000017330 542.00 2293.91 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
83. LDHB ENSGALG00000035836 538.00 2276.98 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
84. ATP5G3 523.00 2213.49 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
85. UBB ENSGALG00000004509 508.00 2150.01 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
86. STMN1 ENSGALG00000001475 503.00 2128.85 stathmin 1 [Source:NCBI gene;Acc:396057]
87. EEF1D 502.00 2124.62 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. ENSGALG00000028992 ENSGALG00000028992 483.00 2044.20
89. RAN ENSGALG00000002569 478.00 2023.04 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
90. RPL31 ENSGALG00000016775 467.00 1976.49 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
91. FTH FTH 457.00 1934.16
92. RPS20 ENSGALG00000014432 447.00 1891.84 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
93. CRHOA CRHOA 428.00 1811.43
94. SLC25A6_1 ENSGALG00000016691 428.00 1811.43 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
95. CHCHD2 ENSGALG00000002495 420.00 1777.57 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
96. PKM ENSGALG00000001992 415.00 1756.41 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
97. RPL37 ENSGALG00000014833 395.00 1671.76 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
98. DYL1 ENSGALG00000007153 385.00 1629.44 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
99. ENSGALG00000028649 ENSGALG00000028649 381.00 1612.51
100. RPS6 ENSGALG00000015082 379.00 1604.04 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA