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Experiment Chicken_E3_aorta, section s26.

Sample reads: 235,157. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4543.00 19321.47
2. RPLP0 ENSGALG00000023294 3460.00 14715.45 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. gga-mir-3533 ENSGALG00000027736 2772.00 11789.37 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. GAPDH ENSGALG00000014442 2368.00 10071.15 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 2299.00 9777.69 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. EEF1A EEF1A 2226.00 9467.22
7. RPS15 ENSGALG00000015195 1995.00 8484.78 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. RPS10 ENSGALG00000002813 1916.00 8148.79 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. gga-mir-3527 gga-mir-3527 1906.00 8106.26
10. RPS29 ENSGALG00000012229 1892.00 8046.72 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
11. RPL4 ENSGALG00000007711 1835.00 7804.29 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. RPS2 ENSGALG00000005490 1772.00 7536.35 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
13. MT-ATP6 MT-ATP6 1771.00 7532.10
14. RPL15 ENSGALG00000011290 1648.00 7008.98 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
15. RPL13 ENSGALG00000006179 1638.00 6966.45 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
16. PPIA ENSGALG00000028600 1579.00 6715.52 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
17. HBZ ENSGALG00000023740 1505.00 6400.80 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
18. RPSA 1488.00 6328.49 ribosomal protein SA
19. MT-ND5 MT-ND5 1441.00 6128.60
20. HBG1 HBG1 1429.00 6077.57
21. RPL23A ENSGALG00000003966 1368.00 5818.13 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
22. RPS4 RPS4 1365.00 5805.37
23. RPS28 ENSGALG00000024398 1344.00 5716.06 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
24. RPLP1 ENSGALG00000030878 1291.00 5490.65 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
25. RPL35 ENSGALG00000035677 1204.00 5120.64 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
26. RPS8 ENSGALG00000010124 1200.00 5103.62 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
27. MT-ND1 MT-ND1 1178.00 5010.06
28. RPL32 ENSGALG00000027142 1161.00 4937.76 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
29. RPS14 ENSGALG00000004588 1151.00 4895.23 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
30. RPL19 ENSGALG00000001658 1127.00 4793.15 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
31. RPL6 ENSGALG00000004818 1112.00 4729.36 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
32. MT-ND3 MT-ND3 1074.00 4567.74
33. SNRPD1 ENSGALG00000041334 1074.00 4567.74 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
34. RPL27A ENSGALG00000005948 1051.00 4469.92 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
35. GNB2L1 ENSGALG00000000122 1042.00 4431.65 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
36. RPL24 ENSGALG00000015339 1030.00 4380.61 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
37. RPS15A ENSGALG00000006771 1007.00 4282.79 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPS11 ENSGALG00000017299 1005.00 4274.29 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
39. RPL7A ENSGALG00000003197 1001.00 4257.27 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
40. RPS21 ENSGALG00000005338 964.00 4099.91 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
41. MT-ND4 MT-ND4 955.00 4061.63
42. HBE 944.00 4014.85 hemoglobin subunit epsilon
43. RPL29 ENSGALG00000026978 934.00 3972.32 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. RPL27 ENSGALG00000002837 924.00 3929.79 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
45. RPL18A 901.00 3831.97 ribosomal protein L18a
46. RPL12 ENSGALG00000008806 897.00 3814.96 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
47. ALDOC ENSGALG00000026077 895.00 3806.45 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
48. RPL36 ENSGALG00000000474 858.00 3649.09 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
49. RPS27A ENSGALG00000036790 843.00 3585.30 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
50. RPS23 ENSGALG00000015617 841.00 3576.79 ribosomal protein S23
51. RPL38 ENSGALG00000001465 840.00 3572.54 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
52. RPL36AL ENSGALG00000004952 805.00 3423.68 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
53. ANP32B ENSGALG00000037483 803.00 3415.18 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
54. NME2 ENSGALG00000002932 800.00 3402.42 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
55. RPL8 ENSGALG00000016232 781.00 3321.61 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
56. RPL7 ENSGALG00000035252 778.00 3308.85 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
57. RPL26 RPL26 775.00 3296.09
58. RPS12 ENSGALG00000013990 763.00 3245.05 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
59. RPL37A ENSGALG00000011472 761.00 3236.55 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
60. CIRBP ENSGALG00000030918 755.00 3211.03 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
61. RPS7 ENSGALG00000016392 730.00 3104.71 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. MT-CYB MT-CYB 693.00 2947.34
63. MT-ND6 MT-ND6 685.00 2913.32
64. PKM ENSGALG00000001992 680.00 2892.05 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
65. RPS16 ENSGALG00000026490 680.00 2892.05 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
66. RPL5 ENSGALG00000005922 667.00 2836.76 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
67. RPL14 ENSGALG00000043379 665.00 2828.26 ribosomal protein L14
68. RPS13 ENSGALG00000006096 655.00 2785.73 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
69. MT-CO1 MT-CO1 654.00 2781.48
70. MDK ENSGALG00000008367 647.00 2751.70 midkine [Source:NCBI gene;Acc:423196]
71. TCEB3 ENSGALG00000034625 645.00 2743.20 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
72. RPS3A ENSGALG00000010077 644.00 2738.95 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
73. RPL21 ENSGALG00000027035 631.00 2683.66 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
74. LDHB ENSGALG00000035836 625.00 2658.14 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
75. ENO1 ENSGALG00000002377 611.00 2598.60 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
76. RPS25 ENSGALG00000007699 604.00 2568.82 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
77. EEF1D 594.00 2526.29 eukaryotic translation elongation factor 1 delta, transcript variant X13
78. EIF5A2 ENSGALG00000009309 593.00 2522.04 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
79. HMGN2 HMGN2 583.00 2479.51
80. RPS20 ENSGALG00000014432 567.00 2411.46 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
81. UBB ENSGALG00000004509 563.00 2394.45 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
82. RPS3 ENSGALG00000017330 558.00 2373.19 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
83. ENSGALG00000018384 ENSGALG00000018384 557.00 2368.93
84. RPS6 ENSGALG00000015082 527.00 2241.34 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
85. MMP15 ENSGALG00000038758 521.00 2215.82 matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
86. RPL10A ENSGALG00000002644 520.00 2211.57 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
87. TMSB4X ENSGALG00000026383 507.00 2156.28 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
88. PRDX1 ENSGALG00000010243 506.00 2152.03 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
89. ENSGALG00000028649 ENSGALG00000028649 504.00 2143.52
90. RPS17 ENSGALG00000002157 501.00 2130.76 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
91. RPL23 ENSGALG00000001634 500.00 2126.51 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
92. ENSGALG00000028992 ENSGALG00000028992 494.00 2100.99
93. STMN1 ENSGALG00000001475 484.00 2058.46 stathmin 1 [Source:NCBI gene;Acc:396057]
94. FTH FTH 470.00 1998.92
95. RPL37 ENSGALG00000014833 438.00 1862.82 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
96. SLC25A6_1 ENSGALG00000016691 436.00 1854.32 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
97. ATP5G3 426.00 1811.79 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
98. DYL1 ENSGALG00000007153 410.00 1743.74 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
99. RPS24 ENSGALG00000004871 404.00 1718.22 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
100. ENSGALG00000022570 ENSGALG00000022570 387.00 1645.92
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA