Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s24.

Sample reads: 234,936. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 5770.00 24563.85
2. RPLP0 ENSGALG00000023294 3056.00 13009.90 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. EEF1A EEF1A 2508.00 10676.97
4. MT-ATP6 MT-ATP6 2441.00 10391.74
5. gga-mir-3527 gga-mir-3527 2397.00 10204.43
6. gga-mir-3533 ENSGALG00000027736 2382.00 10140.57 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. HBZ ENSGALG00000023740 2293.00 9761.68 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
8. RPS29 ENSGALG00000012229 2233.00 9506.25 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
9. RPL35A ENSGALG00000007611, ENSGALG00000041230 2209.00 9404.08 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
10. HBG1 HBG1 2189.00 9318.94
11. MT-ND5 MT-ND5 2136.00 9093.31
12. GAPDH ENSGALG00000014442 2083.00 8867.68 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. RPS15 ENSGALG00000015195 1998.00 8505.82 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
14. RPS10 ENSGALG00000002813 1919.00 8169.50 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
15. RPL4 ENSGALG00000007711 1818.00 7739.53 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
16. MT-ND1 MT-ND1 1635.00 6960.47
17. RPSA 1506.00 6411.29 ribosomal protein SA
18. RPL15 ENSGALG00000011290 1491.00 6347.44 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
19. RPL13 ENSGALG00000006179 1481.00 6304.86 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
20. RPS2 ENSGALG00000005490 1473.00 6270.81 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
21. PPIA ENSGALG00000028600 1381.00 5879.15 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
22. RPL23A ENSGALG00000003966 1378.00 5866.38 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
23. HBE 1346.00 5730.15 hemoglobin subunit epsilon
24. RPS4 RPS4 1337.00 5691.83
25. RPS28 ENSGALG00000024398 1306.00 5559.86 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
26. MT-ND4 MT-ND4 1296.00 5517.29
27. RPS8 ENSGALG00000010124 1284.00 5466.20 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
28. RPL35 ENSGALG00000035677 1274.00 5423.63 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
29. RPLP1 ENSGALG00000030878 1243.00 5291.66 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
30. RPL6 ENSGALG00000004818 1198.00 5100.09 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
31. RPL19 ENSGALG00000001658 1105.00 4704.17 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
32. RPL27A ENSGALG00000005948 1099.00 4678.63 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
33. RPL32 ENSGALG00000027142 1073.00 4567.94 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
34. RPS14 ENSGALG00000004588 1072.00 4563.68 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
35. MT-ND3 MT-ND3 1064.00 4529.63
36. RPL24 ENSGALG00000015339 1045.00 4448.74 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
37. RPS21 ENSGALG00000005338 1011.00 4304.00 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPL7A ENSGALG00000003197 1006.00 4282.71 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
39. MT-ND6 MT-ND6 991.00 4218.85
40. SNRPD1 ENSGALG00000041334 991.00 4218.85 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
41. MT-CYB MT-CYB 972.00 4137.97
42. RPS11 ENSGALG00000017299 972.00 4137.97 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
43. RPL29 ENSGALG00000026978 970.00 4129.45 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
44. RPL38 ENSGALG00000001465 970.00 4129.45 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
45. RPS15A ENSGALG00000006771 968.00 4120.94 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. ENSGALG00000018384 ENSGALG00000018384 951.00 4048.57
47. RPL18A 940.00 4001.74 ribosomal protein L18a
48. RPL27 ENSGALG00000002837 906.00 3856.99 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
49. RPL12 ENSGALG00000008806 903.00 3844.22 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
50. RPL26 RPL26 874.00 3720.76
51. GNB2L1 ENSGALG00000000122 866.00 3686.71 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
52. RPS23 ENSGALG00000015617 819.00 3486.62 ribosomal protein S23
53. RPS12 ENSGALG00000013990 809.00 3444.05 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
54. RPS16 ENSGALG00000026490 786.00 3346.13 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPS27A ENSGALG00000036790 777.00 3307.82 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
56. CIRBP ENSGALG00000030918 761.00 3239.70 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
57. RPL36AL ENSGALG00000004952 751.00 3197.13 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
58. RPS7 ENSGALG00000016392 749.00 3188.62 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
59. NME2 ENSGALG00000002932 740.00 3150.30 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
60. ANP32B ENSGALG00000037483 737.00 3137.53 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
61. RPL21 ENSGALG00000027035 734.00 3124.76 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
62. RPL37A ENSGALG00000011472 729.00 3103.47 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. MT-CO1 MT-CO1 717.00 3052.39
64. RPS25 ENSGALG00000007699 715.00 3043.87 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
65. RPL7 ENSGALG00000035252 712.00 3031.10 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
66. RPL14 ENSGALG00000043379 708.00 3014.07 ribosomal protein L14
67. RPL8 ENSGALG00000016232 695.00 2958.73 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
68. RPL5 ENSGALG00000005922 692.00 2945.96 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
69. RPL36 ENSGALG00000000474 679.00 2890.62 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
70. RPS3A ENSGALG00000010077 677.00 2882.10 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
71. ALDOC ENSGALG00000026077 676.00 2877.84 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
72. HMGN2 HMGN2 624.00 2656.47
73. ENO1 ENSGALG00000002377 617.00 2626.67 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
74. TCEB3 ENSGALG00000034625 613.00 2609.64 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
75. RPS13 ENSGALG00000006096 595.00 2533.01 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
76. ENSGALG00000028649 ENSGALG00000028649 583.00 2481.93
77. PRDX1 ENSGALG00000010243 567.00 2413.81 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
78. MDK ENSGALG00000008367 566.00 2409.56 midkine [Source:NCBI gene;Acc:423196]
79. TMSB4X ENSGALG00000026383 557.00 2371.24 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
80. LDHB ENSGALG00000035836 553.00 2354.21 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
81. EIF5A2 ENSGALG00000009309 550.00 2341.44 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
82. UBB ENSGALG00000004509 545.00 2320.16 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
83. RPS24 ENSGALG00000004871 538.00 2290.36 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
84. RPL23 ENSGALG00000001634 532.00 2264.81 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
85. ENSGALG00000028992 ENSGALG00000028992 529.00 2252.04
86. RPL10A ENSGALG00000002644 515.00 2192.44 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
87. PKM ENSGALG00000001992 500.00 2128.58 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
88. RPS17 ENSGALG00000002157 500.00 2128.58 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
89. STMN1 ENSGALG00000001475 495.00 2107.30 stathmin 1 [Source:NCBI gene;Acc:396057]
90. RPS6 ENSGALG00000015082 476.00 2026.41 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
91. RPS3 ENSGALG00000017330 475.00 2022.15 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
92. CRHOA CRHOA 446.00 1898.70
93. RPS20 ENSGALG00000014432 446.00 1898.70 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
94. FTH FTH 438.00 1864.64
95. RPL37 ENSGALG00000014833 438.00 1864.64 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
96. EEF1D 434.00 1847.61 eukaryotic translation elongation factor 1 delta, transcript variant X13
97. RAN ENSGALG00000002569 390.00 1660.30 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
98. RPL31 ENSGALG00000016775 383.00 1630.49 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
99. ATP5L ENSGALG00000006899 378.00 1609.21 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
100. RPL22 ENSGALG00000000719 374.00 1592.18 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA