Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_aorta, section s13.

Sample reads: 235,229. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 6551.00 27852.18
2. RPLP0 ENSGALG00000023294 3373.00 14340.62 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. HBZ ENSGALG00000023740 2453.00 10429.16 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
4. RPS10 ENSGALG00000002813 2450.00 10416.40 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 2408.00 10237.83 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPS29 ENSGALG00000012229 2214.00 9413.03 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
7. RPS15 ENSGALG00000015195 2210.00 9396.02 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
8. EEF1A EEF1A 2198.00 9345.00
9. GAPDH ENSGALG00000014442 2090.00 8885.83 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. gga-mir-3533 ENSGALG00000027736 2036.00 8656.24 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. HBG1 HBG1 1983.00 8430.91
12. RPL4 ENSGALG00000007711 1964.00 8350.13 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
13. gga-mir-3527 gga-mir-3527 1852.00 7873.95
14. RPS4 RPS4 1730.00 7355.25
15. RPL13 ENSGALG00000006179 1708.00 7261.72 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
16. RPS2 ENSGALG00000005490 1645.00 6993.87 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
17. RPL23A ENSGALG00000003966 1630.00 6930.10 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
18. MT-ATP6 MT-ATP6 1578.00 6709.01
19. RPSA 1531.00 6509.19 ribosomal protein SA
20. RPS8 ENSGALG00000010124 1511.00 6424.16 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
21. RPL15 ENSGALG00000011290 1457.00 6194.57 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
22. RPLP1 ENSGALG00000030878 1445.00 6143.55 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
23. RPS14 ENSGALG00000004588 1430.00 6079.78 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
24. PPIA ENSGALG00000028600 1395.00 5930.97 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
25. RPL19 ENSGALG00000001658 1387.00 5896.96 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
26. MT-ND5 MT-ND5 1330.00 5654.62
27. RPS28 ENSGALG00000024398 1320.00 5612.10 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
28. RPL35 ENSGALG00000035677 1261.00 5361.26 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
29. RPL27A ENSGALG00000005948 1243.00 5284.73 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. HBE 1235.00 5250.72 hemoglobin subunit epsilon
31. MT-ND3 MT-ND3 1213.00 5157.18
32. RPL7A ENSGALG00000003197 1209.00 5140.17 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
33. RPL24 ENSGALG00000015339 1205.00 5123.17 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
34. RPL6 ENSGALG00000004818 1199.00 5097.66 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
35. RPS15A ENSGALG00000006771 1148.00 4880.83 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPL29 ENSGALG00000026978 1144.00 4863.82 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. RPS21 ENSGALG00000005338 1129.00 4800.05 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. MT-ND1 MT-ND1 1113.00 4732.02
39. RPL12 ENSGALG00000008806 1083.00 4604.47 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
40. RPL36 ENSGALG00000000474 1067.00 4536.45 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
41. RPL18A 1022.00 4345.13 ribosomal protein L18a
42. RPL8 ENSGALG00000016232 1012.00 4302.61 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
43. RPL32 ENSGALG00000027142 998.00 4243.09 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
44. RPL7 ENSGALG00000035252 954.00 4056.02 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
45. RPL26 RPL26 946.00 4022.01
46. RPL37A ENSGALG00000011472 924.00 3928.47 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
47. RPS7 ENSGALG00000016392 922.00 3919.97 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
48. RPL27 ENSGALG00000002837 904.00 3843.44 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
49. RPL38 ENSGALG00000001465 895.00 3805.18 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
50. SNRPD1 ENSGALG00000041334 881.00 3745.65 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
51. RPS16 ENSGALG00000026490 863.00 3669.12 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. MT-ND6 MT-ND6 850.00 3613.85
53. RPS12 ENSGALG00000013990 850.00 3613.85 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
54. RPS23 ENSGALG00000015617 850.00 3613.85 ribosomal protein S23
55. RPS11 ENSGALG00000017299 845.00 3592.60 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
56. RPS27A ENSGALG00000036790 819.00 3482.05 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
57. RPS3A ENSGALG00000010077 811.00 3448.04 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
58. NME2 ENSGALG00000002932 801.00 3405.53 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
59. MT-ND4 MT-ND4 794.00 3375.76
60. TCEB3 ENSGALG00000034625 773.00 3286.48 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
61. RPL36AL ENSGALG00000004952 770.00 3273.73 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
62. ANP32B ENSGALG00000037483 762.00 3239.71 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
63. RPL14 ENSGALG00000043379 744.00 3163.18 ribosomal protein L14
64. RPL5 ENSGALG00000005922 742.00 3154.68 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
65. GNB2L1 ENSGALG00000000122 732.00 3112.17 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
66. RPL21 ENSGALG00000027035 696.00 2959.11 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
67. CIRBP ENSGALG00000030918 688.00 2925.10 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
68. ENO1 ENSGALG00000002377 688.00 2925.10 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
69. RPS25 ENSGALG00000007699 682.00 2899.59 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
70. RPL10A ENSGALG00000002644 674.00 2865.57 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
71. MDK ENSGALG00000008367 669.00 2844.32 midkine [Source:NCBI gene;Acc:423196]
72. RPS24 ENSGALG00000004871 663.00 2818.81 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
73. RPS20 ENSGALG00000014432 654.00 2780.54 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
74. MT-CYB MT-CYB 650.00 2763.53
75. RPL23 ENSGALG00000001634 621.00 2640.24 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
76. RPS3 ENSGALG00000017330 619.00 2631.74 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
77. RPS6 ENSGALG00000015082 608.00 2584.97 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
78. RPS17 ENSGALG00000002157 600.00 2550.96 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
79. PRDX1 ENSGALG00000010243 588.00 2499.94 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
80. ENSGALG00000018384 ENSGALG00000018384 586.00 2491.43
81. RPS13 ENSGALG00000006096 584.00 2482.93 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
82. UBB ENSGALG00000004509 584.00 2482.93 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
83. MT-CO1 MT-CO1 551.00 2342.63
84. STMN1 ENSGALG00000001475 551.00 2342.63 stathmin 1 [Source:NCBI gene;Acc:396057]
85. ENSGALG00000028992 ENSGALG00000028992 549.00 2334.12
86. HMGN2 HMGN2 542.00 2304.36
87. EEF1D 532.00 2261.85 eukaryotic translation elongation factor 1 delta, transcript variant X13
88. TMSB4X ENSGALG00000026383 522.00 2219.33 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
89. LDHB ENSGALG00000035836 516.00 2193.82 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
90. EIF5A2 ENSGALG00000009309 514.00 2185.32 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
91. ALDOC ENSGALG00000026077 478.00 2032.26 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
92. PKM ENSGALG00000001992 456.00 1938.73 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
93. RPL37 ENSGALG00000014833 454.00 1930.22 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
94. ZNF593 ENSGALG00000000542 452.00 1921.72 zinc finger protein 593 [Source:NCBI gene;Acc:419549]
95. ATP5G3 441.00 1874.95 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
96. ENSGALG00000028649 ENSGALG00000028649 440.00 1870.70
97. FTH FTH 421.00 1789.92
98. HMGN5 ENSGALG00000007131 421.00 1789.92 high mobility group nucleosome binding domain 5, transcript variant X1
99. RAN ENSGALG00000002569 419.00 1781.42 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
100. RPL31 ENSGALG00000016775 409.00 1738.90 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA