Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_3, section s72.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4769.99 38398.60
2. MT-ND5 MT-ND5 4119.91 33165.43
3. MT-ATP6 MT-ATP6 3389.37 27284.56
4. MT-CYB MT-CYB 2198.02 17694.14
5. GAPDH ENSGALG00000014442 1899.03 15287.26 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
6. MT-ND1 MT-ND1 1783.83 14359.90
7. EEF1A EEF1A 1719.83 13844.70
8. MT-CO1 MT-CO1 1642.11 13219.05
9. gga-mir-3527 gga-mir-3527 1520.51 12240.16
10. MT-ND4 MT-ND4 1375.13 11069.85
11. PPIA ENSGALG00000028600 1333.07 10731.26 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
12. gga-mir-3533 ENSGALG00000027736 1262.67 10164.54 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
13. NME2 ENSGALG00000002932 889.63 7161.56 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
14. MT-ND3 MT-ND3 823.80 6631.62
15. RPL5 ENSGALG00000005922 759.80 6116.42 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
16. RPS23 ENSGALG00000015617 619.91 4990.30 ribosomal protein S23
17. ENO1 ENSGALG00000002377 589.73 4747.35 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
18. RPS6 ENSGALG00000015082 565.96 4556.00 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. RPL15 ENSGALG00000011290 557.73 4489.75 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. RPL8 ENSGALG00000016232 512.93 4129.11 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
21. RPS7 ENSGALG00000016392 511.10 4114.37 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
22. RPS3 ENSGALG00000017330 471.79 3797.93 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. ENSGALG00000002696 ENSGALG00000002696 460.82 3709.62
24. ATP6V0C ENSGALG00000009229 453.50 3650.69 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
25. MDK ENSGALG00000008367 445.27 3584.44 midkine [Source:NCBI gene;Acc:423196]
26. RPL26 RPL26 440.70 3547.65
27. RPL23 ENSGALG00000001634 422.41 3400.42 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
28. RPL27A ENSGALG00000005948 415.10 3341.57 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
29. RPL18A 409.61 3297.38 ribosomal protein L18a
30. EIF4G2 ENSGALG00000005587 406.87 3275.32 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
31. STMN1 ENSGALG00000001475 406.87 3275.32 stathmin 1 [Source:NCBI gene;Acc:396057]
32. RPL7A ENSGALG00000003197 398.64 3209.07 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
33. RPL7 ENSGALG00000035252 384.01 3091.29 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
34. CIRBP ENSGALG00000030918 374.87 3017.72 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
35. FKBP4 ENSGALG00000014331 374.87 3017.72 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
36. RPS10 ENSGALG00000002813 368.47 2966.20 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
37. RPS20 ENSGALG00000014432 366.64 2951.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
38. RPS27A ENSGALG00000036790 361.15 2907.27 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. RPS4 RPS4 329.15 2649.67
40. ENSGALG00000018386 ENSGALG00000018386 322.75 2598.15
41. MIF ENSGALG00000006326 321.84 2590.82 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
42. EIF1 ENSGALG00000028517 317.27 2554.04 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
43. HBE 317.27 2554.04 hemoglobin subunit epsilon
44. RPS12 ENSGALG00000013990 304.47 2450.99 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
45. HBG1 HBG1 298.98 2406.80
46. ENSGALG00000018384 ENSGALG00000018384 295.32 2377.34
47. CRHOA CRHOA 292.58 2355.28
48. RPL31 ENSGALG00000016775 288.92 2325.82 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
49. ATP5G3 281.61 2266.97 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
50. SNRPG ENSGALG00000028409 279.78 2252.24 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
51. RAN ENSGALG00000002569 275.21 2215.45 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
52. EEF1B2 ENSGALG00000008590 273.38 2200.72 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
53. H3-IX H3-IX 266.98 2149.20
54. MT-ND2 MT-ND2 266.98 2149.20
55. RPS16 ENSGALG00000026490 265.15 2134.47 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
56. RPS24 ENSGALG00000004871 262.41 2112.41 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
57. RPS11 ENSGALG00000017299 256.92 2068.22 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
58. LDHB ENSGALG00000035836 255.09 2053.48 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
59. TMSB4X ENSGALG00000026383 254.18 2046.16 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
60. RPL35A ENSGALG00000007611, ENSGALG00000041230 251.44 2024.10 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
61. HBZ ENSGALG00000023740 250.52 2016.70 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
62. RPS8 ENSGALG00000010124 250.52 2016.70 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
63. RPL21 ENSGALG00000027035 245.95 1979.91 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
64. PGK1 ENSGALG00000007936 241.38 1943.12 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
65. RPS29 ENSGALG00000012229 239.55 1928.39 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
66. HMGN2 HMGN2 237.72 1913.65
67. SLC25A6_1 ENSGALG00000016691 235.89 1898.92 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
68. ERH ENSGALG00000017384 234.98 1891.60 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
69. MEIS2 ENSGALG00000039118 231.32 1862.13 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
70. NDUFB9 ENSGALG00000042242 230.41 1854.81 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
71. RPS15A ENSGALG00000006771 229.49 1847.40 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
72. RPL32 ENSGALG00000027142 227.66 1832.67 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
73. EIF3F ENSGALG00000005326 225.84 1818.02 eukaryotic translation initiation factor 3 subunit F
74. ENSGALG00000028992 ENSGALG00000028992 223.09 1795.88
75. ANP32B ENSGALG00000037483 222.18 1788.56 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
76. RPL27 ENSGALG00000002837 219.44 1766.50 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
77. TXN ENSGALG00000015704 219.44 1766.50 thioredoxin [Source:NCBI gene;Acc:396437]
78. HNRNPDL ENSGALG00000023199 213.95 1722.31 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
79. RPL14 ENSGALG00000043379 213.95 1722.31 ribosomal protein L14
80. RPL38 ENSGALG00000001465 213.95 1722.31 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
81. RPL36 ENSGALG00000000474 213.04 1714.98 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
82. RPLP1 ENSGALG00000030878 208.46 1678.11 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
83. RPL10A ENSGALG00000002644 205.72 1656.05 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
84. RPL37 ENSGALG00000014833 205.72 1656.05 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
85. RPSA 205.72 1656.05 ribosomal protein SA
86. RPL29 ENSGALG00000026978 203.89 1641.32 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
87. H2AFZ ENSGALG00000014023 202.98 1634.00 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
88. HMGN5 ENSGALG00000007131 202.06 1626.59 high mobility group nucleosome binding domain 5, transcript variant X1
89. RPL12 ENSGALG00000008806 200.24 1611.94 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
90. RPS14 ENSGALG00000004588 198.41 1597.21 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
91. COX7C ENSGALG00000027963 192.92 1553.01 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
92. RPS15 ENSGALG00000015195 187.43 1508.82 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
93. IGF2BP3 ENSGALG00000010961 185.61 1494.17 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
94. RPL4 ENSGALG00000007711 185.61 1494.17 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
95. RPS21 ENSGALG00000005338 183.78 1479.44 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
96. HNRNPA3 ENSGALG00000009250 182.86 1472.03 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
97. RPL3 ENSGALG00000012172 181.95 1464.70 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
98. KPNA2 ENSGALG00000003584 180.12 1449.97 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
99. SNRPE ENSGALG00000000137 176.46 1420.51 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
100. EEF1D 174.63 1405.78 eukaryotic translation elongation factor 1 delta, transcript variant X13
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA