Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_3, section s59.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 4473.73 36010.08
2. MT-CO3 MT-CO3 4416.63 35550.47
3. MT-ND5 MT-ND5 3890.06 31311.99
4. MT-CYB MT-CYB 2066.10 16630.51
5. MT-ND4 MT-ND4 1954.02 15728.36
6. EEF1A EEF1A 1937.10 15592.16
7. GAPDH ENSGALG00000014442 1812.33 14587.86 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. MT-ND1 MT-ND1 1687.56 13583.56
9. gga-mir-3527 gga-mir-3527 1483.49 11940.95
10. MT-CO1 MT-CO1 1480.32 11915.44
11. gga-mir-3533 ENSGALG00000027736 1392.56 11209.04 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. MT-ND3 MT-ND3 1298.45 10451.52
13. PPIA ENSGALG00000028600 1127.16 9072.77 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. NME2 ENSGALG00000002932 861.76 6936.50 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. MDK ENSGALG00000008367 650.28 5234.25 midkine [Source:NCBI gene;Acc:423196]
16. RPL5 ENSGALG00000005922 618.56 4978.93 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
17. RPS23 ENSGALG00000015617 599.53 4825.76 ribosomal protein S23
18. RPS6 ENSGALG00000015082 584.73 4706.63 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. ENO1 ENSGALG00000002377 503.31 4051.26 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
20. RPL8 ENSGALG00000016232 474.76 3821.45 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
21. RPS7 ENSGALG00000016392 473.70 3812.92 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
22. RPS3 ENSGALG00000017330 468.41 3770.34 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. RPL26 RPL26 455.73 3668.28
24. STMN1 ENSGALG00000001475 447.27 3600.18 stathmin 1 [Source:NCBI gene;Acc:396057]
25. EIF4G2 ENSGALG00000005587 437.75 3523.55 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
26. RPS4 RPS4 424.01 3412.95
27. RPL27A ENSGALG00000005948 400.74 3225.65 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
28. RPL15 ENSGALG00000011290 393.34 3166.08 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
29. RPL7A ENSGALG00000003197 390.17 3140.57 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
30. ATP6V0C ENSGALG00000009229 379.60 3055.49 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
31. RPL7 ENSGALG00000035252 379.60 3055.49 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
32. CIRBP ENSGALG00000030918 366.91 2953.34 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
33. HBE 364.79 2936.28 hemoglobin subunit epsilon
34. ENSGALG00000002696 ENSGALG00000002696 360.56 2902.23
35. RPL18A 348.93 2808.62 ribosomal protein L18a
36. RPS27A ENSGALG00000036790 343.65 2766.12 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
37. RPS10 ENSGALG00000002813 342.59 2757.59 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
38. MT-ND2 MT-ND2 339.42 2732.07
39. ENSGALG00000018386 ENSGALG00000018386 327.78 2638.38
40. ENSGALG00000018384 ENSGALG00000018384 326.73 2629.93
41. RPS16 ENSGALG00000026490 321.44 2587.34 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
42. EEF1B2 ENSGALG00000008590 306.64 2468.22 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
43. RPL23 ENSGALG00000001634 301.35 2425.64 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
44. RPL31 ENSGALG00000016775 299.24 2408.65 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
45. TMSB4X ENSGALG00000026383 299.24 2408.65 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
46. EIF1 ENSGALG00000028517 273.86 2204.36 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
47. HBG1 HBG1 272.80 2195.83
48. HBZ ENSGALG00000023740 272.80 2195.83 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
49. ATP5G3 270.69 2178.85 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
50. RPSA 261.17 2102.22 ribosomal protein SA
51. SNRPG ENSGALG00000028409 259.06 2085.23 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
52. RPS11 ENSGALG00000017299 258.00 2076.70 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
53. RPL21 ENSGALG00000027035 255.88 2059.64 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
54. RPL32 ENSGALG00000027142 253.77 2042.65 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
55. RPL35A ENSGALG00000007611, ENSGALG00000041230 253.77 2042.65 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
56. RPL36 ENSGALG00000000474 250.60 2017.14 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
57. SLC25A6_1 ENSGALG00000016691 248.48 2000.07 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
58. MIF ENSGALG00000006326 247.42 1991.54 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
59. RPL4 ENSGALG00000007711 245.31 1974.56 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
60. ANP32B ENSGALG00000037483 244.25 1966.02 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
61. RPS8 ENSGALG00000010124 243.19 1957.49 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
62. CRHOA CRHOA 240.02 1931.98
63. RAN ENSGALG00000002569 240.02 1931.98 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
64. ENSGALG00000028992 ENSGALG00000028992 236.85 1906.46
65. FKBP4 ENSGALG00000014331 236.85 1906.46 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
66. EIF3F ENSGALG00000005326 233.68 1880.94 eukaryotic translation initiation factor 3 subunit F
67. RPL10A ENSGALG00000002644 231.56 1863.88 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
68. RPL37 ENSGALG00000014833 229.45 1846.90 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
69. RPS20 ENSGALG00000014432 229.45 1846.90 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
70. RPS12 ENSGALG00000013990 226.28 1821.38 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
71. RPLP1 ENSGALG00000030878 223.10 1795.78 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
72. RPS29 ENSGALG00000012229 223.10 1795.78 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
73. HMGN5 ENSGALG00000007131 215.70 1736.22 high mobility group nucleosome binding domain 5, transcript variant X1
74. RPL12 ENSGALG00000008806 212.53 1710.70 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
75. RPS24 ENSGALG00000004871 210.42 1693.72 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
76. H3-IX H3-IX 209.36 1685.19
77. ERH ENSGALG00000017384 207.24 1668.12 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
78. TPT1 ENSGALG00000028872 205.13 1651.14 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
79. RPS15A ENSGALG00000006771 204.07 1642.61 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
80. RPS14 ENSGALG00000004588 203.01 1634.07 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
81. ALDH1A2 ENSGALG00000004270 200.90 1617.09 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
82. LDHB ENSGALG00000035836 200.90 1617.09 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
83. RPL27 ENSGALG00000002837 199.84 1608.56 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
84. MEIS2 ENSGALG00000039118 198.79 1600.11 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
85. BTF3L4 ENSGALG00000010570 195.61 1574.51 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
86. C5ORF13 C5ORF13 193.50 1557.53
87. NDUFB9 ENSGALG00000042242 193.50 1557.53 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
88. RPL38 ENSGALG00000001465 191.38 1540.46 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
89. RPL29 ENSGALG00000026978 190.33 1532.01 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
90. CNN3 ENSGALG00000005597 189.27 1523.48 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
91. KPNA2 ENSGALG00000003584 189.27 1523.48 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
92. RPS3A ENSGALG00000010077 189.27 1523.48 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
93. RPL14 ENSGALG00000043379 186.10 1497.96 ribosomal protein L14
94. RPL3 ENSGALG00000012172 186.10 1497.96 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
95. RPS15 ENSGALG00000015195 186.10 1497.96 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
96. EEF1D 185.04 1489.43 eukaryotic translation elongation factor 1 delta, transcript variant X13
97. MT-ND6 MT-ND6 178.70 1438.40
98. HMGN2 HMGN2 176.58 1421.33
99. RPS21 ENSGALG00000005338 176.58 1421.33 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
100. TXN ENSGALG00000015704 176.58 1421.33 thioredoxin [Source:NCBI gene;Acc:396437]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA