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Experiment Chicken_E3_anterior_slice_3, section s58.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 6167.17 49638.87
2. MT-ND5 MT-ND5 5834.03 46957.46
3. MT-CO3 MT-CO3 5381.60 43315.90
4. MT-CYB MT-CYB 2523.61 20312.26
5. MT-ND4 MT-ND4 2187.37 17605.90
6. gga-mir-3527 gga-mir-3527 2158.33 17372.16
7. MT-ND1 MT-ND1 2018.02 16242.82
8. gga-mir-3533 ENSGALG00000027736 1886.37 15183.18 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. MT-CO1 MT-CO1 1728.76 13914.60
10. MT-ND3 MT-ND3 1629.25 13113.65
11. EEF1A EEF1A 1585.37 12760.47
12. GAPDH ENSGALG00000014442 1535.30 12357.46 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. PPIA ENSGALG00000028600 1147.15 9233.28 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. NME2 ENSGALG00000002932 880.14 7084.15 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. RPL5 ENSGALG00000005922 815.24 6561.78 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
16. RPS23 ENSGALG00000015617 649.60 5228.56 ribosomal protein S23
17. MDK ENSGALG00000008367 570.49 4591.81 midkine [Source:NCBI gene;Acc:423196]
18. RPS6 ENSGALG00000015082 540.82 4353.00 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. RPL15 ENSGALG00000011290 522.89 4208.68 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. EIF4G2 ENSGALG00000005587 455.52 3666.43 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
21. RPS3 ENSGALG00000017330 451.20 3631.66 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
22. ATP6V0C ENSGALG00000009229 441.93 3557.05 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
23. RPL26 RPL26 439.45 3537.08
24. RPL27A ENSGALG00000005948 419.06 3372.97 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
25. STMN1 ENSGALG00000001475 417.82 3362.99 stathmin 1 [Source:NCBI gene;Acc:396057]
26. CIRBP ENSGALG00000030918 415.97 3348.10 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
27. RPS7 ENSGALG00000016392 409.17 3293.36 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
28. RPL31 ENSGALG00000016775 407.93 3283.38 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
29. RPL8 ENSGALG00000016232 404.84 3258.51 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
30. RPL23 ENSGALG00000001634 386.92 3114.28 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
31. RPL18A 376.41 3029.68 ribosomal protein L18a
32. ENO1 ENSGALG00000002377 375.79 3024.69 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
33. ENSGALG00000002696 ENSGALG00000002696 373.32 3004.81
34. RPL7A ENSGALG00000003197 366.52 2950.08 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
35. MT-ND2 MT-ND2 355.39 2860.49
36. RPS4 RPS4 352.92 2840.61
37. TMSB4X ENSGALG00000026383 341.80 2751.11 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
38. RPL7 ENSGALG00000035252 324.49 2611.78 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
39. RPS27A ENSGALG00000036790 323.87 2606.79 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
40. SNRPG ENSGALG00000028409 289.26 2328.22 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
41. RPS20 ENSGALG00000014432 286.79 2308.34 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
42. EEF1B2 ENSGALG00000008590 285.55 2298.36 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
43. RPS10 ENSGALG00000002813 283.70 2283.47 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
44. RPS16 ENSGALG00000026490 280.61 2258.60 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. RPS8 ENSGALG00000010124 273.81 2203.87 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
46. RPS12 ENSGALG00000013990 270.72 2179.00 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
47. ATP5G3 263.92 2124.26 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
48. EIF1 ENSGALG00000028517 263.92 2124.26 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
49. RPL37 ENSGALG00000014833 254.03 2044.66 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
50. RPS24 ENSGALG00000004871 254.03 2044.66 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
51. RPL38 ENSGALG00000001465 250.32 2014.80 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
52. HBE 249.70 2009.81 hemoglobin subunit epsilon
53. HBG1 HBG1 247.23 1989.93
54. RPL32 ENSGALG00000027142 246.61 1984.94 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
55. RAN ENSGALG00000002569 245.99 1979.95 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
56. SLC25A6_1 ENSGALG00000016691 245.99 1979.95 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
57. CRHOA CRHOA 244.76 1970.05
58. ENSGALG00000028992 ENSGALG00000028992 244.14 1965.06
59. RPL21 ENSGALG00000027035 244.14 1965.06 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
60. RPL12 ENSGALG00000008806 240.43 1935.19 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
61. RPS11 ENSGALG00000017299 239.81 1930.20 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
62. HBZ ENSGALG00000023740 223.74 1800.86 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
63. RPSA 223.74 1800.86 ribosomal protein SA
64. RPLP1 ENSGALG00000030878 223.13 1795.95 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
65. RPL23A ENSGALG00000003966 220.65 1775.99 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
66. RPL36 ENSGALG00000000474 220.65 1775.99 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
67. ENSGALG00000018384 ENSGALG00000018384 219.42 1766.09
68. RPL35A ENSGALG00000007611, ENSGALG00000041230 219.42 1766.09 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
69. FKBP4 ENSGALG00000014331 218.18 1756.11 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
70. RPL27 ENSGALG00000002837 218.18 1756.11 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
71. RPS29 ENSGALG00000012229 218.18 1756.11 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
72. RPL4 ENSGALG00000007711 214.47 1726.25 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
73. NDUFB9 ENSGALG00000042242 213.24 1716.35 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
74. RPS14 ENSGALG00000004588 210.15 1691.47 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
75. ALDH1A2 ENSGALG00000004270 203.97 1641.73 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
76. H3-IX H3-IX 203.97 1641.73
77. RPL29 ENSGALG00000026978 202.73 1631.75 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
78. RPS15 ENSGALG00000015195 201.49 1621.77 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
79. HMGN2 HMGN2 199.64 1606.88
80. EIF3F ENSGALG00000005326 198.40 1596.90 eukaryotic translation initiation factor 3 subunit F
81. NONO ENSGALG00000005507 198.40 1596.90 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
82. ERH ENSGALG00000017384 197.78 1591.91 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
83. RPL10A ENSGALG00000002644 196.55 1582.01 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
84. RPL14 ENSGALG00000043379 194.69 1567.04 ribosomal protein L14
85. RPS15A ENSGALG00000006771 192.84 1552.15 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
86. BTF3L4 ENSGALG00000010570 189.13 1522.29 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
87. ANP32B ENSGALG00000037483 183.57 1477.53 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
88. LDHB ENSGALG00000035836 178.01 1432.78 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
89. ENSGALG00000018386 ENSGALG00000018386 177.39 1427.79
90. TXN ENSGALG00000015704 176.77 1422.80 thioredoxin [Source:NCBI gene;Acc:396437]
91. H2AFZ ENSGALG00000014023 174.92 1407.91 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
92. TCF12 ENSGALG00000004304 171.21 1378.05 transcription factor 12 [Source:NCBI gene;Acc:396334]
93. HNRNPA3 ENSGALG00000009250 169.35 1363.08 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
94. MIF ENSGALG00000006326 169.35 1363.08 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
95. RPS3A ENSGALG00000010077 167.50 1348.19 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
96. RPL6 ENSGALG00000004818 163.79 1318.33 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
97. RPL37A ENSGALG00000011472 162.55 1308.35 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
98. SNRPE ENSGALG00000000137 162.55 1308.35 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
99. CALM CALM 161.94 1303.44
100. RPL13 ENSGALG00000006179 161.94 1303.44 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA