Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_3, section s19.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4664.12 37544.59
2. MT-ATP6 MT-ATP6 4375.58 35221.94
3. MT-ND5 MT-ND5 3444.80 27729.47
4. MT-CYB MT-CYB 2057.02 16558.31
5. gga-mir-3527 gga-mir-3527 1917.40 15434.42
6. MT-CO1 MT-CO1 1730.31 13928.41
7. EEF1A EEF1A 1636.30 13171.66
8. MT-ND4 MT-ND4 1552.53 12497.34
9. GAPDH ENSGALG00000014442 1445.50 11635.79 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
10. gga-mir-3533 ENSGALG00000027736 1346.83 10841.53 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. PPIA ENSGALG00000028600 1339.39 10781.64 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
12. MT-ND1 MT-ND1 1223.97 9852.54
13. MT-ND3 MT-ND3 1095.52 8818.56
14. NME2 ENSGALG00000002932 768.82 6188.74 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. RPS23 ENSGALG00000015617 645.96 5199.76 ribosomal protein S23
16. RPL15 ENSGALG00000011290 618.04 4975.01 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
17. RPL5 ENSGALG00000005922 591.04 4757.67 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
18. CRABP-I ENSGALG00000003193 509.13 4098.32 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
19. ENO1 ENSGALG00000002377 495.17 3985.95 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
20. ATP6V0C ENSGALG00000009229 479.35 3858.61 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
21. RPS3 ENSGALG00000017330 468.18 3768.69 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
22. RPS6 ENSGALG00000015082 463.53 3731.26 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
23. CIRBP ENSGALG00000030918 462.60 3723.77 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
24. RPL18A 457.94 3686.26 ribosomal protein L18a
25. TMSB4X ENSGALG00000026383 453.29 3648.83 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
26. STMN1 ENSGALG00000001475 445.84 3588.86 stathmin 1 [Source:NCBI gene;Acc:396057]
27. RPL8 ENSGALG00000016232 435.60 3506.43 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
28. RPS7 ENSGALG00000016392 414.20 3334.17 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
29. EIF4G2 ENSGALG00000005587 412.33 3319.12 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
30. RPL26 RPL26 386.27 3109.34
31. RPL7A ENSGALG00000003197 367.66 2959.54 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPL7 ENSGALG00000035252 364.86 2937.00 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
33. MT-ND2 MT-ND2 361.14 2907.05
34. ENSGALG00000002696 ENSGALG00000002696 354.63 2854.65
35. RPL31 ENSGALG00000016775 354.63 2854.65 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
36. RPL27A ENSGALG00000005948 352.76 2839.60 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPS27A ENSGALG00000036790 334.15 2689.79 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
38. RPS20 ENSGALG00000014432 332.29 2674.82 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
39. RPS12 ENSGALG00000013990 319.26 2569.93 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
40. ATP5G3 315.53 2539.91 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
41. HMGN5 ENSGALG00000007131 312.74 2517.45 high mobility group nucleosome binding domain 5, transcript variant X1
42. RPS4 RPS4 307.16 2472.53
43. RPS16 ENSGALG00000026490 304.36 2449.99 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. FKBP4 ENSGALG00000014331 295.06 2375.13 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
45. EIF1 ENSGALG00000028517 292.26 2352.59 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
46. RPL37 ENSGALG00000014833 287.61 2315.16 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
47. MDK ENSGALG00000008367 286.68 2307.68 midkine [Source:NCBI gene;Acc:423196]
48. ANP32B ENSGALG00000037483 279.23 2247.71 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
49. RPS29 ENSGALG00000012229 273.65 2202.79 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
50. RPS10 ENSGALG00000002813 272.72 2195.30 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
51. RPS11 ENSGALG00000017299 272.72 2195.30 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
52. SNRPG ENSGALG00000028409 271.79 2187.82 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
53. H2AFZ ENSGALG00000014023 264.34 2127.85 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
54. LDHB ENSGALG00000035836 263.41 2120.36 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
55. RAN ENSGALG00000002569 256.89 2067.88 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
56. MIF ENSGALG00000006326 254.10 2045.42 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
57. CRHOA CRHOA 251.31 2022.96
58. ENSGALG00000018386 ENSGALG00000018386 251.31 2022.96
59. SLC25A6_1 ENSGALG00000016691 247.59 1993.02 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
60. RPL21 ENSGALG00000027035 244.79 1970.48 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
61. RPS15 ENSGALG00000015195 243.86 1962.99 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
62. H3-IX H3-IX 241.07 1940.53
63. ENSGALG00000018384 ENSGALG00000018384 240.14 1933.05
64. RPL32 ENSGALG00000027142 238.28 1918.07 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
65. RPLP1 ENSGALG00000030878 238.28 1918.07 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
66. RPL14 ENSGALG00000043379 234.56 1888.13 ribosomal protein L14
67. RPL27 ENSGALG00000002837 233.62 1880.56 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
68. EEF1B2 ENSGALG00000008590 228.04 1835.64 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
69. ENSGALG00000028992 ENSGALG00000028992 225.25 1813.19
70. KPNA2 ENSGALG00000003584 223.39 1798.21 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
71. RPL23 ENSGALG00000001634 223.39 1798.21 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
72. ERH ENSGALG00000017384 221.52 1783.16 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
73. RPL35A ENSGALG00000007611, ENSGALG00000041230 221.52 1783.16 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
74. RPL23A ENSGALG00000003966 220.59 1775.67 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
75. RPS8 ENSGALG00000010124 218.73 1760.70 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
76. TXN ENSGALG00000015704 217.80 1753.22 thioredoxin [Source:NCBI gene;Acc:396437]
77. HNRNPDL ENSGALG00000023199 211.29 1700.81 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
78. CDK1 ENSGALG00000003085 210.36 1693.33 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
79. RPSA 209.42 1685.76 ribosomal protein SA
80. RPL29 ENSGALG00000026978 204.77 1648.33 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
81. RPS14 ENSGALG00000004588 204.77 1648.33 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
82. RPL36 ENSGALG00000000474 201.05 1618.38 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
83. RPS15A ENSGALG00000006771 195.46 1573.39 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
84. RPS24 ENSGALG00000004871 195.46 1573.39 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
85. ACTC1 ENSGALG00000009844 194.53 1565.90 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
86. EIF3F ENSGALG00000005326 194.53 1565.90 eukaryotic translation initiation factor 3 subunit F
87. HMGN2 HMGN2 194.53 1565.90
88. NONO ENSGALG00000005507 189.88 1528.47 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
89. SNRPE ENSGALG00000000137 189.88 1528.47 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
90. EIF5A2 ENSGALG00000009309 188.95 1520.98 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
91. IGF2BP3 ENSGALG00000010961 188.02 1513.50 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
92. RPS3A ENSGALG00000010077 188.02 1513.50 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
93. MEIS2 ENSGALG00000039118 184.29 1483.47 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
94. RPL12 ENSGALG00000008806 182.43 1468.50 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
95. RPL6 ENSGALG00000004818 180.57 1453.53 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
96. SET ENSGALG00000004701 180.57 1453.53 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
97. CALM CALM 179.64 1446.04
98. NDUFB9 ENSGALG00000042242 179.64 1446.04 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
99. TPT1 ENSGALG00000028872 178.71 1438.55 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
100. HMGB1 ENSGALG00000042875 177.78 1431.07 high mobility group box 1 [Source:NCBI gene;Acc:395724]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA