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Experiment Chicken_E3_anterior_slice_1, section s48.

Sample reads: 124,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2282.87 18374.82
2. RPS8 ENSGALG00000010124 1317.04 10600.85 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
3. RPL26 RPL26 1141.44 9187.45
4. MT-ATP6 MT-ATP6 1009.73 8127.31
5. RPL38 ENSGALG00000001465 965.83 7773.96 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
6. RPLP0 ENSGALG00000023294 921.93 7420.61 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
7. MT-CYB MT-CYB 878.03 7067.26
8. RPL35A ENSGALG00000007611, ENSGALG00000041230 878.03 7067.26 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
9. MT-ND5 MT-ND5 834.13 6713.91
10. RPS2 ENSGALG00000005490 834.13 6713.91 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
11. RPS6 ENSGALG00000015082 834.13 6713.91 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
12. RPS12 ENSGALG00000013990 790.22 6360.48 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
13. RPS21 ENSGALG00000005338 790.22 6360.48 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
14. RPL27A ENSGALG00000005948 746.32 6007.13 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
15. RPL32 ENSGALG00000027142 746.32 6007.13 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
16. gga-mir-3533 ENSGALG00000027736 746.32 6007.13 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
17. GAPDH ENSGALG00000014442 702.42 5653.78 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. RPL21 ENSGALG00000027035 702.42 5653.78 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
19. RPS10 ENSGALG00000002813 702.42 5653.78 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
20. RPSA 702.42 5653.78 ribosomal protein SA
21. RPL29 ENSGALG00000026978 658.52 5300.43 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
22. RPL4 ENSGALG00000007711 658.52 5300.43 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
23. MT-CO1 MT-CO1 614.62 4947.08
24. RPL15 ENSGALG00000011290 614.62 4947.08 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
25. ENSGALG00000002696 ENSGALG00000002696 570.72 4593.72
26. ENSGALG00000028992 ENSGALG00000028992 570.72 4593.72
27. RPLP1 ENSGALG00000030878 570.72 4593.72 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
28. RPS16 ENSGALG00000026490 570.72 4593.72 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
29. RPS23 ENSGALG00000015617 570.72 4593.72 ribosomal protein S23
30. RPL23A ENSGALG00000003966 526.82 4240.37 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
31. RPL27 ENSGALG00000002837 526.82 4240.37 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
32. RPL36AL ENSGALG00000004952 526.82 4240.37 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
33. RPL6 ENSGALG00000004818 526.82 4240.37 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
34. RPL7A ENSGALG00000003197 526.82 4240.37 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
35. RPS15A ENSGALG00000006771 526.82 4240.37 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPS3A ENSGALG00000010077 526.82 4240.37 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
37. gga-mir-3527 gga-mir-3527 526.82 4240.37
38. EEF1A EEF1A 482.92 3887.02
39. RPL10A ENSGALG00000002644 482.92 3887.02 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
40. RPL14 ENSGALG00000043379 482.92 3887.02 ribosomal protein L14
41. RPL37 ENSGALG00000014833 482.92 3887.02 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
42. RPS15 ENSGALG00000015195 482.92 3887.02 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
43. RPS7 ENSGALG00000016392 482.92 3887.02 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
44. ENSGALG00000018384 ENSGALG00000018384 439.01 3533.59
45. RPL19 ENSGALG00000001658 439.01 3533.59 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
46. RPL24 ENSGALG00000015339 439.01 3533.59 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
47. RPL36 ENSGALG00000000474 439.01 3533.59 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
48. RPS25 ENSGALG00000007699 439.01 3533.59 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
49. AKAP12 ENSGALG00000036240 395.11 3180.24 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
50. PRTG ENSGALG00000037336 395.11 3180.24 protogenin [Source:NCBI gene;Acc:415407]
51. RPL5 ENSGALG00000005922 395.11 3180.24 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
52. RPS28 ENSGALG00000024398 395.11 3180.24 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
53. CIRBP ENSGALG00000030918 351.21 2826.89 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
54. HMGN5 ENSGALG00000007131 351.21 2826.89 high mobility group nucleosome binding domain 5, transcript variant X1
55. MDK ENSGALG00000008367 351.21 2826.89 midkine [Source:NCBI gene;Acc:423196]
56. MT-ND4 MT-ND4 351.21 2826.89
57. MT-ND6 MT-ND6 351.21 2826.89
58. RPL13 ENSGALG00000006179 351.21 2826.89 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
59. RPL7 ENSGALG00000035252 351.21 2826.89 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
60. TMSB4X ENSGALG00000026383 351.21 2826.89 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
61. TXN ENSGALG00000015704 351.21 2826.89 thioredoxin [Source:NCBI gene;Acc:396437]
62. CCT4 ENSGALG00000008812 307.31 2473.54 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
63. EIF5A2 ENSGALG00000009309 307.31 2473.54 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
64. LDHB ENSGALG00000035836 307.31 2473.54 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
65. MT-ND1 MT-ND1 307.31 2473.54
66. MT-ND3 MT-ND3 307.31 2473.54
67. PPIA ENSGALG00000028600 307.31 2473.54 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
68. PRDX1 ENSGALG00000010243 307.31 2473.54 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
69. RPL3 ENSGALG00000012172 307.31 2473.54 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
70. RPL8 ENSGALG00000016232 307.31 2473.54 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
71. ATP6V0C ENSGALG00000009229 263.41 2120.19 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
72. CDC5L ENSGALG00000016704 263.41 2120.19 cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
73. DYL1 ENSGALG00000007153 263.41 2120.19 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
74. ENO1 ENSGALG00000002377 263.41 2120.19 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
75. ENSGALG00000018386 ENSGALG00000018386 263.41 2120.19
76. GDI2 ENSGALG00000008169 263.41 2120.19 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
77. GNB2L1 ENSGALG00000000122 263.41 2120.19 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
78. HMGN2 HMGN2 263.41 2120.19
79. HSPE1 ENSGALG00000009070 263.41 2120.19 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
80. IGF2BP3 ENSGALG00000010961 263.41 2120.19 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
81. RAN ENSGALG00000002569 263.41 2120.19 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
82. RPL23 ENSGALG00000001634 263.41 2120.19 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
83. RPL31 ENSGALG00000016775 263.41 2120.19 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
84. RPS14 ENSGALG00000004588 263.41 2120.19 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
85. RPS3 ENSGALG00000017330 263.41 2120.19 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
86. RTN4 ENSGALG00000029261 263.41 2120.19 reticulon 4 [Source:NCBI gene;Acc:378790]
87. UBB ENSGALG00000004509 263.41 2120.19 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
88. BZW2 ENSGALG00000010809 219.51 1766.84 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
89. ENSGALG00000022570 ENSGALG00000022570 219.51 1766.84
90. GTF2H2 ENSGALG00000002399 219.51 1766.84 general transcription factor IIH subunit 2, transcript variant X2
91. HBG1 HBG1 219.51 1766.84
92. HMGB2 ENSGALG00000010745 219.51 1766.84 high mobility group box 2 [Source:NCBI gene;Acc:396482]
93. HNRNPU ENSGALG00000010671 219.51 1766.84 heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
94. LBR 219.51 1766.84 lamin B receptor, transcript variant X4
95. MRPS33 ENSGALG00000028879 219.51 1766.84 mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
96. NSA2 ENSGALG00000014942 219.51 1766.84 NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
97. RPL18A 219.51 1766.84 ribosomal protein L18a
98. RPLP2 ENSGALG00000034811 219.51 1766.84 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
99. RPS20 ENSGALG00000014432 219.51 1766.84 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
100. RPS27A ENSGALG00000036790 219.51 1766.84 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA