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Experiment Chicken_E3_anterior_slice_1, section s45.

Sample reads: 124,235. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3646.14 29349.94
2. RPLP1 ENSGALG00000030878 1234.56 9937.70 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
3. EEF1A EEF1A 1192.71 9600.83
4. gga-mir-3533 ENSGALG00000027736 1077.63 8674.48 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
5. RPS10 ENSGALG00000002813 1067.16 8590.20 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. MDK ENSGALG00000008367 957.31 7705.95 midkine [Source:NCBI gene;Acc:423196]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 952.08 7663.86 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPL4 ENSGALG00000007711 920.69 7411.18 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
9. RPLP0 ENSGALG00000023294 873.61 7032.20 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
10. ENSGALG00000018384 ENSGALG00000018384 836.99 6737.43
11. MT-ATP6 MT-ATP6 831.76 6695.33
12. RPS8 ENSGALG00000010124 816.07 6569.03 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
13. GAPDH ENSGALG00000014442 748.06 6021.58 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
14. MT-CYB MT-CYB 674.82 5432.03
15. HBG1 HBG1 664.36 5347.83
16. TMSB4X ENSGALG00000026383 653.90 5263.63 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
17. RPS28 ENSGALG00000024398 643.44 5179.43 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
18. gga-mir-3527 gga-mir-3527 638.21 5137.33
19. HBZ ENSGALG00000023740 612.05 4926.75 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
20. RPS23 ENSGALG00000015617 612.05 4926.75 ribosomal protein S23
21. RPL7A ENSGALG00000003197 606.82 4884.65 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. MT-ND5 MT-ND5 580.66 4674.08
23. RPL27A ENSGALG00000005948 575.43 4631.98 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
24. RPL27 ENSGALG00000002837 559.74 4505.68 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
25. RPL32 ENSGALG00000027142 554.51 4463.58 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
26. RPL26 RPL26 549.28 4421.48
27. RPL23A ENSGALG00000003966 544.04 4379.30 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
28. RPSA 544.04 4379.30 ribosomal protein SA
29. RPS12 ENSGALG00000013990 538.81 4337.20 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
30. MT-ND4 MT-ND4 533.58 4295.10
31. HBE 523.12 4210.90 hemoglobin subunit epsilon
32. RPL13 ENSGALG00000006179 523.12 4210.90 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
33. RPS3A ENSGALG00000010077 523.12 4210.90 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
34. RPL8 ENSGALG00000016232 517.89 4168.80 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
35. RPL29 ENSGALG00000026978 476.04 3831.93 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
36. RPS11 ENSGALG00000017299 476.04 3831.93 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
37. RPS4 RPS4 470.81 3789.83
38. RPS6 ENSGALG00000015082 455.11 3663.45 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
39. RPS7 ENSGALG00000016392 449.88 3621.35 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
40. SNRPD1 ENSGALG00000041334 444.65 3579.25 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
41. RPL21 ENSGALG00000027035 439.42 3537.15 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
42. RPS15 ENSGALG00000015195 434.19 3495.05 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
43. RPS2 ENSGALG00000005490 423.73 3410.85 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
44. RPS29 ENSGALG00000012229 413.26 3326.57 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
45. RPL36AL ENSGALG00000004952 408.03 3284.47 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
46. RPS15A ENSGALG00000006771 408.03 3284.47 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
47. GNB2L1 ENSGALG00000000122 397.57 3200.28 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
48. ENSGALG00000018386 ENSGALG00000018386 387.11 3116.08
49. MT-CO1 MT-CO1 387.11 3116.08
50. RPL6 ENSGALG00000004818 387.11 3116.08 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
51. PPIA ENSGALG00000028600 381.88 3073.98 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
52. RPL14 ENSGALG00000043379 381.88 3073.98 ribosomal protein L14
53. RPS27A ENSGALG00000036790 376.65 3031.88 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
54. RPS21 ENSGALG00000005338 371.41 2989.70 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
55. RPL19 ENSGALG00000001658 366.18 2947.60 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
56. RPS16 ENSGALG00000026490 366.18 2947.60 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
57. RPL15 ENSGALG00000011290 360.95 2905.50 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
58. RPL36 ENSGALG00000000474 360.95 2905.50 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
59. ANP32B ENSGALG00000037483 355.72 2863.40 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
60. RPL5 ENSGALG00000005922 350.49 2821.30 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
61. RPL38 ENSGALG00000001465 334.80 2695.00 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
62. TCEB3 ENSGALG00000034625 334.80 2695.00 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
63. MT-ND6 MT-ND6 329.57 2652.90
64. AKAP12 ENSGALG00000036240 319.10 2568.62 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
65. RPS14 ENSGALG00000004588 319.10 2568.62 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
66. RPL10A ENSGALG00000002644 313.87 2526.53 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
67. RPS20 ENSGALG00000014432 313.87 2526.53 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. HMGN2 HMGN2 308.64 2484.43
69. RAN ENSGALG00000002569 308.64 2484.43 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
70. NME2 ENSGALG00000002932 303.41 2442.33 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
71. RPL12 ENSGALG00000008806 303.41 2442.33 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
72. RPLP2 ENSGALG00000034811 303.41 2442.33 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
73. RPL7 ENSGALG00000035252 298.18 2400.23 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
74. EEF1D 292.95 2358.13 eukaryotic translation elongation factor 1 delta, transcript variant X13
75. ENSGALG00000028649 ENSGALG00000028649 287.72 2316.03
76. ENSGALG00000028992 ENSGALG00000028992 287.72 2316.03
77. RPL24 ENSGALG00000015339 287.72 2316.03 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
78. CIRBP ENSGALG00000030918 282.48 2273.85 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
79. FTH FTH 277.25 2231.75
80. ENO1 ENSGALG00000002377 256.33 2063.35 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
81. RPL31 ENSGALG00000016775 251.10 2021.25 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
82. CRHOA CRHOA 245.87 1979.15
83. MT-ND3 MT-ND3 245.87 1979.15
84. NUCKS1 ENSGALG00000000708 245.87 1979.15 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
85. SET ENSGALG00000004701 245.87 1979.15 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
86. RPL18A 240.64 1937.05 ribosomal protein L18a
87. RPL35 ENSGALG00000035677 240.64 1937.05 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
88. RPL37 ENSGALG00000014833 240.64 1937.05 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
89. RPL23 ENSGALG00000001634 235.40 1894.87 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
90. RPS25 ENSGALG00000007699 235.40 1894.87 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
91. ENSGALG00000002696 ENSGALG00000002696 230.17 1852.77
92. HMGN5 ENSGALG00000007131 230.17 1852.77 high mobility group nucleosome binding domain 5, transcript variant X1
93. STMN1 ENSGALG00000001475 230.17 1852.77 stathmin 1 [Source:NCBI gene;Acc:396057]
94. H3-IX H3-IX 224.94 1810.68
95. COX7C ENSGALG00000027963 209.25 1684.38 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
96. EIF4G2 ENSGALG00000005587 209.25 1684.38 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
97. EIF5A2 ENSGALG00000009309 209.25 1684.38 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
98. GPX1 ENSGALG00000028204 204.02 1642.28 glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
99. RPS13 ENSGALG00000006096 204.02 1642.28 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
100. HMGB2 ENSGALG00000010745 198.79 1600.18 high mobility group box 2 [Source:NCBI gene;Acc:396482]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA