Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_1, section s43.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 2962.57 23848.50
2. MT-ATP6 MT-ATP6 1490.47 11998.19
3. gga-mir-3533 ENSGALG00000027736 1266.53 10195.48 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
4. RPLP0 ENSGALG00000023294 1200.45 9663.54 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. MT-ND5 MT-ND5 1167.41 9397.58
6. MDK ENSGALG00000008367 1093.99 8806.55 midkine [Source:NCBI gene;Acc:423196]
7. RPLP1 ENSGALG00000030878 1046.26 8422.33 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
8. RPL4 ENSGALG00000007711 998.54 8038.18 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
9. EEF1A EEF1A 972.84 7831.30
10. ENSGALG00000018384 ENSGALG00000018384 895.75 7210.73
11. RPL35A ENSGALG00000007611, ENSGALG00000041230 829.67 6678.79 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
12. RPS10 ENSGALG00000002813 807.64 6501.45 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
13. RPS8 ENSGALG00000010124 800.30 6442.36 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
14. RPS28 ENSGALG00000024398 715.86 5762.63 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
15. TMSB4X ENSGALG00000026383 712.19 5733.08 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
16. GAPDH ENSGALG00000014442 682.82 5496.66 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. gga-mir-3527 gga-mir-3527 679.15 5467.11
18. RPS23 ENSGALG00000015617 653.46 5260.31 ribosomal protein S23
19. MT-CYB MT-CYB 627.76 5053.43
20. RPSA 565.35 4551.03 ribosomal protein SA
21. MT-CO1 MT-CO1 558.01 4491.94
22. RPS12 ENSGALG00000013990 558.01 4491.94 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
23. RPL7A ENSGALG00000003197 546.99 4403.23 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
24. RPS2 ENSGALG00000005490 539.65 4344.15 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
25. RPL27 ENSGALG00000002837 532.31 4285.06 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
26. RPS4 RPS4 513.95 4137.26
27. RPL27A ENSGALG00000005948 499.27 4019.09 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
28. RPL8 ENSGALG00000016232 488.26 3930.46 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
29. RPL15 ENSGALG00000011290 484.58 3900.84 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
30. RPL23A ENSGALG00000003966 477.24 3841.75 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
31. RPS15 ENSGALG00000015195 477.24 3841.75 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
32. RPS6 ENSGALG00000015082 473.57 3812.21 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
33. RPL13 ENSGALG00000006179 469.90 3782.66 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
34. MT-ND4 MT-ND4 458.89 3694.03
35. RPL26 RPL26 458.89 3694.03
36. RPL29 ENSGALG00000026978 455.22 3664.49 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. RPS21 ENSGALG00000005338 447.87 3605.32 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPL32 ENSGALG00000027142 444.20 3575.78 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
39. RPS15A ENSGALG00000006771 425.85 3428.06 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. SNRPD1 ENSGALG00000041334 418.50 3368.90 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
41. RPS3A ENSGALG00000010077 407.49 3280.27 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
42. RPS29 ENSGALG00000012229 403.82 3250.72 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
43. ENSGALG00000018386 ENSGALG00000018386 400.15 3221.18
44. GNB2L1 ENSGALG00000000122 400.15 3221.18 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
45. MT-ND6 MT-ND6 400.15 3221.18
46. RPL19 ENSGALG00000001658 389.14 3132.55 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
47. RPL5 ENSGALG00000005922 389.14 3132.55 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
48. RPL21 ENSGALG00000027035 385.47 3103.01 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
49. PPIA ENSGALG00000028600 378.12 3043.84 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
50. RPL36AL ENSGALG00000004952 374.45 3014.30 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
51. RPS14 ENSGALG00000004588 374.45 3014.30 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
52. RPS27A ENSGALG00000036790 374.45 3014.30 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
53. ENO1 ENSGALG00000002377 363.44 2925.67 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
54. RPL38 ENSGALG00000001465 359.77 2896.13 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
55. RPL24 ENSGALG00000015339 356.10 2866.58 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
56. HBG1 HBG1 352.43 2837.04
57. RPS16 ENSGALG00000026490 345.08 2777.87 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
58. ENSGALG00000002696 ENSGALG00000002696 337.74 2718.79
59. HBZ ENSGALG00000023740 337.74 2718.79 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
60. RPS11 ENSGALG00000017299 334.07 2689.24 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
61. RPL12 ENSGALG00000008806 330.40 2659.70 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
62. AKAP12 ENSGALG00000036240 326.73 2630.16 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
63. MT-ND1 MT-ND1 323.06 2600.61
64. ANP32B ENSGALG00000037483 319.39 2571.07 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
65. ENSGALG00000028992 ENSGALG00000028992 312.04 2511.90
66. RPL6 ENSGALG00000004818 308.37 2482.36 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
67. CIRBP ENSGALG00000030918 301.03 2423.27 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
68. RPL36 ENSGALG00000000474 301.03 2423.27 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
69. RPS7 ENSGALG00000016392 301.03 2423.27 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
70. NME2 ENSGALG00000002932 293.69 2364.19 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
71. RPL14 ENSGALG00000043379 293.69 2364.19 ribosomal protein L14
72. EEF1D 286.35 2305.10 eukaryotic translation elongation factor 1 delta, transcript variant X13
73. RPLP2 ENSGALG00000034811 286.35 2305.10 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
74. ENSGALG00000028649 ENSGALG00000028649 279.00 2245.93
75. RPL18A 275.33 2216.39 ribosomal protein L18a
76. HBE 271.66 2186.85 hemoglobin subunit epsilon
77. RPL35 ENSGALG00000035677 271.66 2186.85 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
78. TCEB3 ENSGALG00000034625 271.66 2186.85 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
79. SET ENSGALG00000004701 267.99 2157.30 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
80. STMN1 ENSGALG00000001475 264.32 2127.76 stathmin 1 [Source:NCBI gene;Acc:396057]
81. RPS25 ENSGALG00000007699 260.65 2098.22 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. RPL23 ENSGALG00000001634 253.31 2039.13 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
83. HMGN2 HMGN2 245.96 1979.96
84. EIF5A2 ENSGALG00000009309 242.29 1950.42 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
85. NUCKS1 ENSGALG00000000708 242.29 1950.42 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
86. RAN ENSGALG00000002569 242.29 1950.42 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
87. RPL10A ENSGALG00000002644 238.62 1920.88 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
88. CRHOA CRHOA 231.28 1861.79
89. RPL3 ENSGALG00000012172 231.28 1861.79 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
90. FTH FTH 227.61 1832.25
91. UBB ENSGALG00000004509 223.94 1802.70 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
92. RPL31 ENSGALG00000016775 220.27 1773.16 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
93. RPS20 ENSGALG00000014432 220.27 1773.16 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
94. TXN ENSGALG00000015704 220.27 1773.16 thioredoxin [Source:NCBI gene;Acc:396437]
95. MT-ND3 MT-ND3 216.59 1743.54
96. MYL12A ENSGALG00000014854 216.59 1743.54 myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
97. PHB2 ENSGALG00000014567 212.92 1713.99 prohibitin 2 [Source:NCBI gene;Acc:771124]
98. RPL37 ENSGALG00000014833 209.25 1684.45 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
99. HMGN5 ENSGALG00000007131 205.58 1654.91 high mobility group nucleosome binding domain 5, transcript variant X1
100. LDHB ENSGALG00000035836 205.58 1654.91 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA