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Experiment Chicken_E3_anterior_slice_1, section s42.

Sample reads: 124,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4313.72 34722.01
2. ENSGALG00000018384 ENSGALG00000018384 1160.44 9340.62
3. RPLP1 ENSGALG00000030878 1035.38 8333.99 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. RPS8 ENSGALG00000010124 1035.38 8333.99 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
5. EEF1A EEF1A 1029.22 8284.40
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 1004.62 8086.39 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPS10 ENSGALG00000002813 984.12 7921.38 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. MT-ATP6 MT-ATP6 947.21 7624.29
9. RPS23 ENSGALG00000015617 904.16 7277.77 ribosomal protein S23
10. MDK ENSGALG00000008367 875.46 7046.76 midkine [Source:NCBI gene;Acc:423196]
11. MT-ND5 MT-ND5 830.35 6683.66
12. RPLP0 ENSGALG00000023294 822.15 6617.65 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
13. gga-mir-3533 ENSGALG00000027736 820.10 6601.15 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
14. RPL4 ENSGALG00000007711 813.95 6551.65 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
15. GAPDH ENSGALG00000014442 733.99 5908.04 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. RPS28 ENSGALG00000024398 725.79 5842.03 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
17. MT-CYB MT-CYB 713.49 5743.03
18. gga-mir-3527 gga-mir-3527 709.39 5710.03
19. RPS12 ENSGALG00000013990 668.38 5379.93 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
20. RPL27A ENSGALG00000005948 621.23 5000.41 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPS6 ENSGALG00000015082 615.07 4950.82 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
22. RPL21 ENSGALG00000027035 608.92 4901.32 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
23. RPL13 ENSGALG00000006179 598.67 4818.82 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
24. RPL32 ENSGALG00000027142 594.57 4785.82 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
25. RPS15 ENSGALG00000015195 586.37 4719.81 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
26. RPL7A ENSGALG00000003197 576.12 4637.31 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPS3A ENSGALG00000010077 565.87 4554.80 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
28. RPL23A ENSGALG00000003966 559.72 4505.30 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
29. RPL8 ENSGALG00000016232 553.57 4455.80 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
30. RPSA 553.57 4455.80 ribosomal protein SA
31. MT-ND4 MT-ND4 535.11 4307.21
32. MT-CO1 MT-CO1 531.01 4274.21
33. RPL26 RPL26 524.86 4224.71
34. RPL15 ENSGALG00000011290 508.46 4092.70 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
35. RPS4 RPS4 506.41 4076.20
36. RPS2 ENSGALG00000005490 502.31 4043.20 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
37. RPS29 ENSGALG00000012229 500.26 4026.70 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
38. RPL19 ENSGALG00000001658 485.91 3911.19 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
39. RPS21 ENSGALG00000005338 479.76 3861.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
40. RPL29 ENSGALG00000026978 473.61 3812.18 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
41. RPL38 ENSGALG00000001465 467.46 3762.68 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
42. RPS11 ENSGALG00000017299 467.46 3762.68 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
43. RPL27 ENSGALG00000002837 461.31 3713.18 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
44. PPIA ENSGALG00000028600 459.26 3696.68 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
45. RPS15A ENSGALG00000006771 436.70 3515.09 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. RPS16 ENSGALG00000026490 420.30 3383.08 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. RPS7 ENSGALG00000016392 420.30 3383.08 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
48. RPL14 ENSGALG00000043379 416.20 3350.08 ribosomal protein L14
49. RPS14 ENSGALG00000004588 412.10 3317.08 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
50. RPL24 ENSGALG00000015339 408.00 3284.08 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
51. TMSB4X ENSGALG00000026383 408.00 3284.08 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
52. RPL35 ENSGALG00000035677 399.80 3218.07 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
53. RPL36 ENSGALG00000000474 399.80 3218.07 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
54. ENSGALG00000018386 ENSGALG00000018386 397.75 3201.57
55. RPL6 ENSGALG00000004818 395.70 3185.07 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
56. MT-ND6 MT-ND6 393.65 3168.57
57. ENSGALG00000002696 ENSGALG00000002696 381.35 3069.56
58. RPL12 ENSGALG00000008806 373.15 3003.56 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
59. ENO1 ENSGALG00000002377 369.04 2970.48 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
60. RPL36AL ENSGALG00000004952 360.84 2904.47 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
61. RPS27A ENSGALG00000036790 344.44 2772.47 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
62. RPL5 ENSGALG00000005922 342.39 2755.97 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
63. SNRPD1 ENSGALG00000041334 340.34 2739.47 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
64. GNB2L1 ENSGALG00000000122 338.29 2722.97 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
65. MT-ND3 MT-ND3 332.14 2673.46
66. CIRBP ENSGALG00000030918 321.89 2590.96 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
67. EEF1D 321.89 2590.96 eukaryotic translation elongation factor 1 delta, transcript variant X13
68. RPL23 ENSGALG00000001634 313.69 2524.95 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
69. ENSGALG00000028992 ENSGALG00000028992 309.59 2491.95
70. RPL37 ENSGALG00000014833 307.54 2475.45 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
71. RPS20 ENSGALG00000014432 307.54 2475.45 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
72. CRHOA CRHOA 297.29 2392.95
73. ENSGALG00000028649 ENSGALG00000028649 293.19 2359.95
74. RPL10A ENSGALG00000002644 291.14 2343.45 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
75. ANP32B ENSGALG00000037483 280.88 2260.86 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
76. NME2 ENSGALG00000002932 278.83 2244.36 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
77. HMGN2 HMGN2 276.78 2227.86
78. MT-ND1 MT-ND1 270.63 2178.36
79. RPL18A 268.58 2161.86 ribosomal protein L18a
80. RPS25 ENSGALG00000007699 268.58 2161.86 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
81. RPLP2 ENSGALG00000034811 264.48 2128.85 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
82. RPS13 ENSGALG00000006096 262.43 2112.35 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
83. TCEB3 ENSGALG00000034625 262.43 2112.35 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
84. RPL7 ENSGALG00000035252 252.18 2029.85 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. RPL3 ENSGALG00000012172 248.08 1996.85 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
86. AKAP12 ENSGALG00000036240 241.93 1947.34 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
87. RPL37A ENSGALG00000011472 233.73 1881.34 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
88. STMN1 ENSGALG00000001475 231.68 1864.84 stathmin 1 [Source:NCBI gene;Acc:396057]
89. SET ENSGALG00000004701 221.43 1782.34 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
90. LDHB ENSGALG00000035836 213.23 1716.33 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
91. TXN ENSGALG00000015704 211.18 1699.83 thioredoxin [Source:NCBI gene;Acc:396437]
92. NUCKS1 ENSGALG00000000708 202.97 1633.75 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
93. PRDX1 ENSGALG00000010243 202.97 1633.75 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
94. DYL1 ENSGALG00000007153 200.92 1617.25 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
95. HMGN5 ENSGALG00000007131 200.92 1617.25 high mobility group nucleosome binding domain 5, transcript variant X1
96. RAN ENSGALG00000002569 196.82 1584.24 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
97. RPL31 ENSGALG00000016775 194.77 1567.74 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
98. FTH FTH 188.62 1518.24
99. SLC25A6_1 ENSGALG00000016691 178.37 1435.74 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
100. RPS17 ENSGALG00000002157 174.27 1402.73 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA