Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s41.

Sample reads: 124,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3578.97 28808.10
2. EEF1A EEF1A 1408.00 11333.37
3. RPLP0 ENSGALG00000023294 1198.60 9647.85 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
4. MDK ENSGALG00000008367 1092.70 8795.44 midkine [Source:NCBI gene;Acc:423196]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 1085.48 8737.32 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPS10 ENSGALG00000002813 1046.97 8427.34 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
7. RPS8 ENSGALG00000010124 989.21 7962.42 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
8. RPLP1 ENSGALG00000030878 981.99 7904.30 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
9. gga-mir-3533 ENSGALG00000027736 926.63 7458.69 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. RPL4 ENSGALG00000007711 924.23 7439.38 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
11. MT-ATP6 MT-ATP6 895.34 7206.83
12. RPS28 ENSGALG00000024398 808.70 6509.44 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
13. RPS12 ENSGALG00000013990 803.88 6470.65 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
14. GAPDH ENSGALG00000014442 729.27 5870.09 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
15. RPL7A ENSGALG00000003197 724.46 5831.37 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
16. MT-ND5 MT-ND5 702.80 5657.03
17. RPL27A ENSGALG00000005948 678.73 5463.28 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
18. RPS23 ENSGALG00000015617 671.51 5405.17 ribosomal protein S23
19. ENSGALG00000018384 ENSGALG00000018384 649.85 5230.82
20. gga-mir-3527 gga-mir-3527 620.96 4998.27
21. RPSA 608.93 4901.44 ribosomal protein SA
22. RPL32 ENSGALG00000027142 601.71 4843.33 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
23. RPL26 RPL26 596.90 4804.61
24. RPL8 ENSGALG00000016232 589.68 4746.49 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
25. MT-CYB MT-CYB 582.45 4688.30
26. RPS4 RPS4 570.42 4591.46
27. RPL27 ENSGALG00000002837 568.01 4572.07 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
28. RPS3A ENSGALG00000010077 568.01 4572.07 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
29. RPL21 ENSGALG00000027035 543.95 4378.40 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
30. RPL23A ENSGALG00000003966 536.72 4320.20 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
31. RPS15 ENSGALG00000015195 529.50 4262.09 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
32. TMSB4X ENSGALG00000026383 517.47 4165.26 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
33. RPS2 ENSGALG00000005490 515.06 4145.86 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
34. RPS15A ENSGALG00000006771 512.66 4126.54 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPS29 ENSGALG00000012229 505.44 4068.42 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
36. RPL13 ENSGALG00000006179 503.03 4049.02 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
37. RPL29 ENSGALG00000026978 486.18 3913.39 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
38. ENO1 ENSGALG00000002377 457.30 3680.93 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
39. RPS21 ENSGALG00000005338 457.30 3680.93 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
40. RPL12 ENSGALG00000008806 454.89 3661.53 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
41. MT-ND6 MT-ND6 452.49 3642.21
42. MT-CO1 MT-CO1 445.26 3584.02
43. RPL15 ENSGALG00000011290 445.26 3584.02 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
44. RPL5 ENSGALG00000005922 445.26 3584.02 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
45. RPS7 ENSGALG00000016392 445.26 3584.02 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
46. MT-ND4 MT-ND4 442.86 3564.70
47. RPS11 ENSGALG00000017299 438.04 3525.90 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
48. RPS6 ENSGALG00000015082 428.42 3448.47 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
49. RPL35 ENSGALG00000035677 426.01 3429.07 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
50. RPL36AL ENSGALG00000004952 426.01 3429.07 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
51. SNRPD1 ENSGALG00000041334 426.01 3429.07 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
52. RPL19 ENSGALG00000001658 413.98 3332.24 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
53. RPL36 ENSGALG00000000474 413.98 3332.24 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
54. GNB2L1 ENSGALG00000000122 409.16 3293.44 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
55. RPS16 ENSGALG00000026490 389.91 3138.49 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
56. RPL38 ENSGALG00000001465 387.50 3119.09 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
57. RPL24 ENSGALG00000015339 382.69 3080.38 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
58. PPIA ENSGALG00000028600 375.47 3022.26 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
59. RPS14 ENSGALG00000004588 370.65 2983.46 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
60. TCEB3 ENSGALG00000034625 356.21 2867.23 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
61. RPL14 ENSGALG00000043379 353.81 2847.91 ribosomal protein L14
62. ENSGALG00000018386 ENSGALG00000018386 339.36 2731.60
63. RPL7 ENSGALG00000035252 339.36 2731.60 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
64. RPS27A ENSGALG00000036790 336.96 2712.28 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
65. ENSGALG00000028992 ENSGALG00000028992 327.33 2634.77
66. RPL10A ENSGALG00000002644 327.33 2634.77 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
67. RPLP2 ENSGALG00000034811 327.33 2634.77 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
68. FTH FTH 317.70 2557.25
69. RAN ENSGALG00000002569 315.30 2537.93 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
70. ENSGALG00000002696 ENSGALG00000002696 312.89 2518.54
71. ENSGALG00000028649 ENSGALG00000028649 312.89 2518.54
72. ANP32B ENSGALG00000037483 310.48 2499.14 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
73. RPS20 ENSGALG00000014432 305.67 2460.42 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
74. EEF1D 300.85 2421.62 eukaryotic translation elongation factor 1 delta, transcript variant X13
75. NME2 ENSGALG00000002932 300.85 2421.62 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
76. RPL6 ENSGALG00000004818 300.85 2421.62 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
77. HMGN2 HMGN2 293.63 2363.51
78. CRHOA CRHOA 288.82 2324.79
79. MT-ND3 MT-ND3 288.82 2324.79
80. CIRBP ENSGALG00000030918 274.38 2208.56 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
81. RPL18A 274.38 2208.56 ribosomal protein L18a
82. RPL37 ENSGALG00000014833 274.38 2208.56 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
83. STMN1 ENSGALG00000001475 262.35 2111.73 stathmin 1 [Source:NCBI gene;Acc:396057]
84. RPL23 ENSGALG00000001634 259.94 2092.33 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
85. PRDX1 ENSGALG00000010243 257.53 2072.93 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
86. AKAP12 ENSGALG00000036240 252.72 2034.21 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
87. MT-ND1 MT-ND1 233.46 1879.18
88. UBB ENSGALG00000004509 231.06 1859.86 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
89. EIF4EBP1 ENSGALG00000003205 228.65 1840.47 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
90. HMGN5 ENSGALG00000007131 228.65 1840.47 high mobility group nucleosome binding domain 5, transcript variant X1
91. RPS25 ENSGALG00000007699 228.65 1840.47 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
92. RPS13 ENSGALG00000006096 219.02 1762.95 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
93. SLC25A6_1 ENSGALG00000016691 219.02 1762.95 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
94. TXN ENSGALG00000015704 216.62 1743.63 thioredoxin [Source:NCBI gene;Acc:396437]
95. SET ENSGALG00000004701 211.80 1704.84 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
96. RPL3 ENSGALG00000012172 209.39 1685.44 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
97. RPL31 ENSGALG00000016775 209.39 1685.44 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
98. H3-IX H3-IX 204.58 1646.72
99. NUCKS1 ENSGALG00000000708 204.58 1646.72 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
100. SFPQ ENSGALG00000002514 202.17 1627.32 splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA