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Experiment Chicken_E3_anterior_slice_1, section s4.

Sample reads: 124,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3084.60 24828.52
2. RPLP0 ENSGALG00000023294 1212.16 9756.90 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
3. MT-ATP6 MT-ATP6 1152.64 9277.81
4. RPLP1 ENSGALG00000030878 1064.82 8570.93 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
5. EEF1A EEF1A 1018.16 8195.36
6. RPL35A ENSGALG00000007611, ENSGALG00000041230 983.25 7914.36 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
7. RPL4 ENSGALG00000007711 956.43 7698.48 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
8. RPS28 ENSGALG00000024398 912.70 7346.49 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
9. RPS10 ENSGALG00000002813 890.29 7166.11 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
10. RPS23 ENSGALG00000015617 849.87 6840.76 ribosomal protein S23
11. GAPDH ENSGALG00000014442 813.50 6548.01 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. MT-ND5 MT-ND5 792.19 6376.48
13. gga-mir-3533 ENSGALG00000027736 766.10 6166.48 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
14. RPL23A ENSGALG00000003966 754.34 6071.82 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
15. RPS8 ENSGALG00000010124 738.54 5944.65 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
16. RPS12 ENSGALG00000013990 735.97 5923.96 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. RPL27A ENSGALG00000005948 704.74 5672.58 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
18. RPL29 ENSGALG00000026978 661.38 5323.57 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
19. PPIA ENSGALG00000028600 658.44 5299.91 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
20. RPL27 ENSGALG00000002837 653.30 5258.53 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
21. RPS15 ENSGALG00000015195 646.68 5205.25 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
22. gga-mir-3527 gga-mir-3527 643.01 5175.71
23. RPL38 ENSGALG00000001465 634.56 5107.69 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
24. RPL7A ENSGALG00000003197 612.51 4930.21 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
25. RPS21 ENSGALG00000005338 604.06 4862.19 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
26. RPS11 ENSGALG00000017299 602.96 4853.34 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
27. RPL32 ENSGALG00000027142 589.73 4746.85 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
28. RPL26 RPL26 572.09 4604.86
29. RPL13 ENSGALG00000006179 565.11 4548.68 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
30. RPL8 ENSGALG00000016232 556.66 4480.66 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
31. TMSB4X ENSGALG00000026383 544.90 4386.00 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
32. RPSA 540.86 4353.48 ribosomal protein SA
33. RPL15 ENSGALG00000011290 539.76 4344.63 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
34. RPS29 ENSGALG00000012229 535.72 4312.11 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
35. MT-CYB MT-CYB 519.18 4178.98
36. RPS16 ENSGALG00000026490 505.96 4072.57 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
37. RPS15A ENSGALG00000006771 505.22 4066.61 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
38. RPS2 ENSGALG00000005490 501.55 4037.07 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
39. RPL19 ENSGALG00000001658 489.79 3942.41 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
40. RPL35 ENSGALG00000035677 483.17 3889.13 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
41. SNRPD1 ENSGALG00000041334 468.84 3773.78 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
42. RPL36 ENSGALG00000000474 466.64 3756.07 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
43. RPS4 RPS4 466.64 3756.07
44. RPS3A ENSGALG00000010077 464.44 3738.36 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
45. RPL24 ENSGALG00000015339 463.70 3732.41 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
46. RPS6 ENSGALG00000015082 456.72 3676.22 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
47. RPS27A ENSGALG00000036790 455.25 3664.39 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
48. MT-ND4 MT-ND4 450.47 3625.92
49. TCEB3 ENSGALG00000034625 449.74 3620.04 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
50. MT-CO1 MT-CO1 440.18 3543.09
51. RPS7 ENSGALG00000016392 435.04 3501.72 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
52. NME2 ENSGALG00000002932 430.26 3463.24 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
53. GNB2L1 ENSGALG00000000122 429.53 3457.37 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
54. RPL14 ENSGALG00000043379 419.24 3374.54 ribosomal protein L14
55. ENO1 ENSGALG00000002377 401.60 3232.55 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
56. MT-ND6 MT-ND6 400.50 3223.70
57. RPL36AL ENSGALG00000004952 394.26 3173.47 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
58. RPL12 ENSGALG00000008806 382.13 3075.84 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
59. RPL21 ENSGALG00000027035 374.05 3010.80 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
60. ANP32B ENSGALG00000037483 357.51 2877.66 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
61. RPL5 ENSGALG00000005922 352.74 2839.27 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
62. RPL37A ENSGALG00000011472 350.90 2824.46 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
63. RPL6 ENSGALG00000004818 350.90 2824.46 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
64. RPS13 ENSGALG00000006096 348.33 2803.77 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
65. RPLP2 ENSGALG00000034811 346.12 2785.98 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
66. RAN ENSGALG00000002569 343.18 2762.32 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
67. RPL37 ENSGALG00000014833 340.24 2738.65 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
68. RPS14 ENSGALG00000004588 340.24 2738.65 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
69. RPS20 ENSGALG00000014432 335.83 2703.16 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
70. MDK ENSGALG00000008367 335.47 2700.26 midkine [Source:NCBI gene;Acc:423196]
71. ENSGALG00000028992 ENSGALG00000028992 335.10 2697.28
72. ALDOC ENSGALG00000026077 333.63 2685.45 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
73. HMGN2 HMGN2 324.44 2611.48
74. MT-ND3 MT-ND3 320.40 2578.96
75. RPL18A 319.67 2573.08 ribosomal protein L18a
76. CIRBP ENSGALG00000030918 318.20 2561.25 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
77. EIF5A2 ENSGALG00000009309 315.26 2537.59 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
78. RPL23 ENSGALG00000001634 313.42 2522.78 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
79. ENSGALG00000018384 ENSGALG00000018384 298.72 2404.45
80. LDHB ENSGALG00000035836 297.99 2398.58 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
81. RPS25 ENSGALG00000007699 297.25 2392.62 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. MT-ND1 MT-ND1 296.89 2389.72
83. STMN1 ENSGALG00000001475 295.42 2377.89 stathmin 1 [Source:NCBI gene;Acc:396057]
84. ENSGALG00000028649 ENSGALG00000028649 292.48 2354.23
85. TXN ENSGALG00000015704 292.48 2354.23 thioredoxin [Source:NCBI gene;Acc:396437]
86. ENSGALG00000002696 ENSGALG00000002696 291.01 2342.39
87. RPL7 ENSGALG00000035252 279.25 2247.74 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
88. PKM ENSGALG00000001992 269.33 2167.89 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
89. EEF1D 240.67 1937.20 eukaryotic translation elongation factor 1 delta, transcript variant X13
90. PRDX1 ENSGALG00000010243 236.63 1904.68 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
91. MARCKSL1 ENSGALG00000032335 236.26 1901.70 MARCKS like 1 [Source:NCBI gene;Acc:770764]
92. RPL31 ENSGALG00000016775 234.42 1886.89 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
93. UBB ENSGALG00000004509 228.91 1842.54 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
94. ATP5G3 222.66 1792.23 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
95. SLC25A6_1 ENSGALG00000016691 217.15 1747.88 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
96. HSPA8 ENSGALG00000006512 215.68 1736.05 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
97. SET ENSGALG00000004701 213.11 1715.36 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
98. CCT4 ENSGALG00000008812 212.74 1712.38 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
99. RPS17 ENSGALG00000002157 210.91 1697.65 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
100. MIF ENSGALG00000006326 205.76 1656.20 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA