Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s38.

Sample reads: 124,234. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3862.99 31096.17
2. ENSGALG00000018384 ENSGALG00000018384 1272.13 10240.35
3. RPLP1 ENSGALG00000030878 1081.58 8706.47 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. EEF1A EEF1A 1073.36 8640.30
5. RPS10 ENSGALG00000002813 1073.36 8640.30 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. gga-mir-3533 ENSGALG00000027736 958.21 7713.37 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 925.31 7448.53 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. RPLP0 ENSGALG00000023294 885.56 7128.55 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
9. MDK ENSGALG00000008367 832.09 6698.13 midkine [Source:NCBI gene;Acc:423196]
10. RPS8 ENSGALG00000010124 826.61 6654.02 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
11. GAPDH ENSGALG00000014442 790.97 6367.12 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. RPS23 ENSGALG00000015617 790.97 6367.12 ribosomal protein S23
13. MT-ATP6 MT-ATP6 723.80 5826.42
14. RPSA 705.98 5682.97 ribosomal protein SA
15. RPL32 ENSGALG00000027142 692.27 5572.61 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
16. RPS12 ENSGALG00000013990 664.85 5351.89 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
17. RPL7A ENSGALG00000003197 658.00 5296.75 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
18. RPL4 ENSGALG00000007711 653.89 5263.66 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
19. RPL26 RPL26 652.51 5252.55
20. gga-mir-3527 gga-mir-3527 649.77 5230.50
21. RPS6 ENSGALG00000015082 645.66 5197.41 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
22. RPS11 ENSGALG00000017299 636.06 5120.13 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
23. RPS28 ENSGALG00000024398 616.87 4965.66 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
24. RPL27A ENSGALG00000005948 615.50 4954.63 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
25. MT-ND5 MT-ND5 596.31 4800.16
26. RPL8 ENSGALG00000016232 596.31 4800.16 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
27. RPL38 ENSGALG00000001465 593.57 4778.10 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
28. RPL23A ENSGALG00000003966 555.19 4469.15 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
29. RPL27 ENSGALG00000002837 538.74 4336.73 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
30. RPL15 ENSGALG00000011290 537.36 4325.62 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
31. RPL29 ENSGALG00000026978 535.99 4314.59 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
32. RPL21 ENSGALG00000027035 515.43 4149.09 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
33. RPS3A ENSGALG00000010077 512.69 4127.03 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
34. RPS21 ENSGALG00000005338 511.32 4116.01 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
35. RPL19 ENSGALG00000001658 503.09 4049.76 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
36. RPL13 ENSGALG00000006179 494.87 3983.59 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
37. ENSGALG00000018386 ENSGALG00000018386 486.64 3917.34
38. RPS15 ENSGALG00000015195 486.64 3917.34 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
39. RPS4 RPS4 485.27 3906.31
40. RPS29 ENSGALG00000012229 478.42 3851.17 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
41. MT-CYB MT-CYB 472.94 3807.06
42. MT-CO1 MT-CO1 470.19 3784.92
43. RPL14 ENSGALG00000043379 463.34 3729.78 ribosomal protein L14
44. RPS2 ENSGALG00000005490 456.49 3674.64 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
45. RPS27A ENSGALG00000036790 442.78 3564.28 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
46. TMSB4X ENSGALG00000026383 433.18 3487.00 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
47. PPIA ENSGALG00000028600 424.96 3420.83 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
48. RPS16 ENSGALG00000026490 424.96 3420.83 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
49. RPL35 ENSGALG00000035677 416.73 3354.58 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
50. RPL6 ENSGALG00000004818 407.14 3277.38 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
51. RPS15A ENSGALG00000006771 401.65 3233.19 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
52. RPS7 ENSGALG00000016392 389.32 3133.93 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
53. MT-ND6 MT-ND6 387.94 3122.83
54. RPL36AL ENSGALG00000004952 385.20 3100.77 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
55. ENSGALG00000002696 ENSGALG00000002696 383.83 3089.74
56. RPS14 ENSGALG00000004588 378.35 3045.63 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
57. SNRPD1 ENSGALG00000041334 374.24 3012.54 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
58. RPLP2 ENSGALG00000034811 370.12 2979.38 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
59. GNB2L1 ENSGALG00000000122 361.90 2913.21 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
60. RPS20 ENSGALG00000014432 360.53 2902.18 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
61. RPL12 ENSGALG00000008806 346.82 2791.82 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
62. RPL24 ENSGALG00000015339 344.08 2769.76 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
63. RPL36 ENSGALG00000000474 341.34 2747.71 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
64. TCEB3 ENSGALG00000034625 341.34 2747.71 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
65. RPS25 ENSGALG00000007699 338.59 2725.57 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. MT-ND4 MT-ND4 323.52 2604.26
67. RPL5 ENSGALG00000005922 323.52 2604.26 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
68. RPL18A 319.40 2571.10 ribosomal protein L18a
69. ENO1 ENSGALG00000002377 316.66 2549.04 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
70. ENSGALG00000028992 ENSGALG00000028992 312.55 2515.95
71. RPL23 ENSGALG00000001634 307.07 2471.84 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
72. RPS13 ENSGALG00000006096 304.32 2449.70 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
73. NME2 ENSGALG00000002932 301.58 2427.65 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
74. CIRBP ENSGALG00000030918 298.84 2405.59 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
75. EEF1D 289.24 2328.31 eukaryotic translation elongation factor 1 delta, transcript variant X13
76. ENSGALG00000028649 ENSGALG00000028649 286.50 2306.26
77. TXN ENSGALG00000015704 285.13 2295.23 thioredoxin [Source:NCBI gene;Acc:396437]
78. CRHOA CRHOA 278.28 2240.09
79. RPL37 ENSGALG00000014833 274.17 2207.00 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
80. STMN1 ENSGALG00000001475 270.05 2173.84 stathmin 1 [Source:NCBI gene;Acc:396057]
81. HMGN2 HMGN2 267.31 2151.78
82. AKAP12 ENSGALG00000036240 264.57 2129.73 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
83. ANP32B ENSGALG00000037483 261.83 2107.67 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
84. RPL7 ENSGALG00000035252 260.46 2096.64 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
85. RPL10A ENSGALG00000002644 256.34 2063.48 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
86. HBG1 HBG1 254.97 2052.45
87. RPL31 ENSGALG00000016775 244.01 1964.22 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
88. UBB ENSGALG00000004509 244.01 1964.22 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
89. MT-ND3 MT-ND3 230.30 1853.86
90. HMGN5 ENSGALG00000007131 223.45 1798.72 high mobility group nucleosome binding domain 5, transcript variant X1
91. HBE 222.07 1787.61 hemoglobin subunit epsilon
92. SET ENSGALG00000004701 222.07 1787.61 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
93. LDHB ENSGALG00000035836 219.33 1765.56 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
94. RAN ENSGALG00000002569 217.96 1754.53 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
95. HBZ ENSGALG00000023740 215.22 1732.47 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
96. MT-ND1 MT-ND1 215.22 1732.47
97. RPL37A ENSGALG00000011472 215.22 1732.47 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
98. NUCKS1 ENSGALG00000000708 208.37 1677.33 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
99. PRDX1 ENSGALG00000010243 202.88 1633.14 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
100. EIF5A2 ENSGALG00000009309 198.77 1600.05 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA