Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s34.

Sample reads: 124,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3230.04 25999.06
2. EEF1A EEF1A 1373.87 11058.48
3. RPLP1 ENSGALG00000030878 1133.33 9122.34 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
4. RPLP0 ENSGALG00000023294 1112.98 8958.54 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. RPS10 ENSGALG00000002813 1035.19 8332.39 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
6. MT-ATP6 MT-ATP6 896.37 7215.01
7. RPL35A ENSGALG00000007611, ENSGALG00000041230 889.19 7157.22 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
8. gga-mir-3533 ENSGALG00000027736 878.42 7070.53 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. RPS8 ENSGALG00000010124 856.88 6897.15 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
10. RPS28 ENSGALG00000024398 836.53 6733.35 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
11. RPL4 ENSGALG00000007711 795.84 6405.83 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
12. GAPDH ENSGALG00000014442 788.66 6348.04 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. RPS23 ENSGALG00000015617 764.73 6155.42 ribosomal protein S23
14. gga-mir-3527 gga-mir-3527 721.64 5808.58
15. RPL23A ENSGALG00000003966 713.26 5741.13 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
16. RPL32 ENSGALG00000027142 707.28 5693.00 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
17. RPL29 ENSGALG00000026978 706.08 5683.34 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
18. RPL27A ENSGALG00000005948 692.92 5577.41 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
19. RPL15 ENSGALG00000011290 686.94 5529.28 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
20. RPS21 ENSGALG00000005338 676.17 5442.59 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
21. MDK ENSGALG00000008367 671.38 5404.03 midkine [Source:NCBI gene;Acc:423196]
22. RPL27 ENSGALG00000002837 666.59 5365.48 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
23. MT-ND5 MT-ND5 663.00 5336.58
24. RPS15 ENSGALG00000015195 652.23 5249.89 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
25. RPL38 ENSGALG00000001465 643.85 5182.44 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
26. RPS11 ENSGALG00000017299 640.26 5153.55 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
27. RPS12 ENSGALG00000013990 625.90 5037.96 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
28. RPS29 ENSGALG00000012229 625.90 5037.96 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
29. MT-CYB MT-CYB 618.72 4980.17
30. RPL26 RPL26 604.36 4864.58
31. RPL7A ENSGALG00000003197 603.16 4854.92 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
32. RPL13 ENSGALG00000006179 593.59 4777.89 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
33. RPL19 ENSGALG00000001658 579.23 4662.31 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
34. PPIA ENSGALG00000028600 570.85 4594.85 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
35. RPS15A ENSGALG00000006771 566.06 4556.30 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPS2 ENSGALG00000005490 557.69 4488.93 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
37. RPS3A ENSGALG00000010077 542.13 4363.68 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
38. RPS4 RPS4 536.15 4315.55
39. RPL8 ENSGALG00000016232 533.75 4296.23 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
40. RPSA 533.75 4296.23 ribosomal protein SA
41. RPL24 ENSGALG00000015339 519.39 4180.65 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
42. MT-ND4 MT-ND4 506.23 4074.72
43. RPL35 ENSGALG00000035677 503.83 4055.40 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
44. RPS6 ENSGALG00000015082 499.05 4016.93 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
45. RPS16 ENSGALG00000026490 487.08 3920.58 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. RPL14 ENSGALG00000043379 471.52 3795.33 ribosomal protein L14
47. RPL36 ENSGALG00000000474 457.16 3679.75 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
48. GNB2L1 ENSGALG00000000122 448.78 3612.29 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
49. RPL21 ENSGALG00000027035 447.59 3602.72 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
50. RPS7 ENSGALG00000016392 436.81 3515.95 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. RPL12 ENSGALG00000008806 435.62 3506.37 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
52. RPL6 ENSGALG00000004818 433.22 3487.05 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
53. ENSGALG00000018384 ENSGALG00000018384 406.90 3275.20
54. RPL23 ENSGALG00000001634 405.70 3265.54 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
55. RPL36AL ENSGALG00000004952 405.70 3265.54 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
56. MT-CO1 MT-CO1 402.11 3236.64
57. MT-ND3 MT-ND3 397.32 3198.09
58. RPL37 ENSGALG00000014833 387.75 3121.06 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
59. RPS27A ENSGALG00000036790 380.57 3063.26 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
60. RPL37A ENSGALG00000011472 376.98 3034.37 ribosomal protein L37a [Source:NCBI gene;Acc:769981]
61. RPS14 ENSGALG00000004588 374.58 3015.05 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
62. MT-ND6 MT-ND6 372.19 2995.81
63. RPL18A 372.19 2995.81 ribosomal protein L18a
64. NME2 ENSGALG00000002932 368.60 2966.91 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
65. RPL5 ENSGALG00000005922 357.83 2880.23 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
66. TCEB3 ENSGALG00000034625 354.24 2851.33 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
67. RPS20 ENSGALG00000014432 342.27 2754.98 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
68. ENO1 ENSGALG00000002377 341.07 2745.32 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
69. ENSGALG00000028992 ENSGALG00000028992 337.48 2716.43
70. RPS13 ENSGALG00000006096 337.48 2716.43 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
71. HMGN2 HMGN2 335.09 2697.19
72. SNRPD1 ENSGALG00000041334 333.89 2687.53 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
73. RPL7 ENSGALG00000035252 331.50 2668.29 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
74. STMN1 ENSGALG00000001475 321.93 2591.26 stathmin 1 [Source:NCBI gene;Acc:396057]
75. RPS25 ENSGALG00000007699 317.14 2552.71 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
76. RPLP2 ENSGALG00000034811 314.75 2533.47 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
77. TXN ENSGALG00000015704 309.96 2494.91 thioredoxin [Source:NCBI gene;Acc:396437]
78. EEF1D 294.40 2369.67 eukaryotic translation elongation factor 1 delta, transcript variant X13
79. ENSGALG00000002696 ENSGALG00000002696 294.40 2369.67
80. TMSB4X ENSGALG00000026383 292.01 2350.43 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
81. MT-ND1 MT-ND1 290.81 2340.77
82. PRDX1 ENSGALG00000010243 284.83 2292.64 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
83. RPL10A ENSGALG00000002644 282.43 2273.32 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
84. ANP32B ENSGALG00000037483 277.65 2234.84 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
85. ENSGALG00000028649 ENSGALG00000028649 276.45 2225.19
86. RPL31 ENSGALG00000016775 275.25 2215.53 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
87. CIRBP ENSGALG00000030918 266.88 2148.16 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
88. RPS17 ENSGALG00000002157 253.71 2042.15 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
89. EIF5A2 ENSGALG00000009309 244.14 1965.12 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
90. CRHOA CRHOA 238.15 1916.90
91. RPS24 ENSGALG00000004871 226.19 1820.64 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
92. UBB ENSGALG00000004509 208.24 1676.15 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
93. H3-IX H3-IX 207.04 1666.49
94. RPL3 ENSGALG00000012172 205.84 1656.84 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
95. PKM ENSGALG00000001992 199.86 1608.70 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
96. RAN ENSGALG00000002569 196.27 1579.81 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
97. SET ENSGALG00000004701 196.27 1579.81 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
98. LDHB ENSGALG00000035836 195.07 1570.15 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
99. ALDOC ENSGALG00000026077 192.68 1550.91 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
100. HBG1 HBG1 192.68 1550.91
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA