Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_1, section s32.

Sample reads: 124,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3066.35 24682.94
2. ENSGALG00000018384 ENSGALG00000018384 1293.73 10414.03
3. MT-ATP6 MT-ATP6 1150.78 9263.34
4. RPLP0 ENSGALG00000023294 1111.97 8950.93 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. RPL35A ENSGALG00000007611, ENSGALG00000041230 1017.01 8186.54 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
6. RPL4 ENSGALG00000007711 992.51 7989.32 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
7. RPS10 ENSGALG00000002813 977.19 7866.00 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
8. RPLP1 ENSGALG00000030878 964.94 7767.40 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
9. MT-ND5 MT-ND5 956.77 7701.63
10. gga-mir-3533 ENSGALG00000027736 918.99 7397.52 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. EEF1A EEF1A 906.73 7298.83
12. RPS8 ENSGALG00000010124 837.30 6739.94 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
13. MDK ENSGALG00000008367 798.50 6427.62 midkine [Source:NCBI gene;Acc:423196]
14. ENSGALG00000018386 ENSGALG00000018386 770.93 6205.69
15. RPS28 ENSGALG00000024398 761.74 6131.71 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
16. GAPDH ENSGALG00000014442 730.08 5876.86 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. gga-mir-3527 gga-mir-3527 728.04 5860.44
18. RPS23 ENSGALG00000015617 714.77 5753.62 ribosomal protein S23
19. RPS12 ENSGALG00000013990 707.62 5696.07 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
20. RPL27A ENSGALG00000005948 666.78 5367.32 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPL7A ENSGALG00000003197 624.91 5030.29 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
22. MT-CYB MT-CYB 623.89 5022.08
23. RPSA 609.59 4906.97 ribosomal protein SA
24. RPL32 ENSGALG00000027142 602.45 4849.49 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
25. RPL38 ENSGALG00000001465 600.40 4832.99 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
26. RPS15 ENSGALG00000015195 586.11 4717.96 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
27. RPL26 RPL26 569.77 4586.43
28. RPL8 ENSGALG00000016232 569.77 4586.43 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
29. RPL23A ENSGALG00000003966 558.54 4496.03 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
30. RPL29 ENSGALG00000026978 538.12 4331.66 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
31. RPL19 ENSGALG00000001658 522.80 4208.34 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
32. RPS2 ENSGALG00000005490 522.80 4208.34 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
33. RPL27 ENSGALG00000002837 513.61 4134.36 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
34. RPL15 ENSGALG00000011290 509.53 4101.52 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
35. RPL13 ENSGALG00000006179 507.49 4085.10 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
36. PPIA ENSGALG00000028600 494.21 3978.20 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
37. RPS6 ENSGALG00000015082 491.15 3953.57 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
38. RPS11 ENSGALG00000017299 482.98 3887.80 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
39. RPL21 ENSGALG00000027035 480.94 3871.38 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
40. RPS21 ENSGALG00000005338 468.68 3772.69 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
41. RPL12 ENSGALG00000008806 467.66 3764.48 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
42. RPS29 ENSGALG00000012229 463.58 3731.64 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
43. SNRPD1 ENSGALG00000041334 455.41 3665.88 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
44. RPS3A ENSGALG00000010077 451.32 3632.95 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
45. RPS16 ENSGALG00000026490 427.84 3443.95 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. NME2 ENSGALG00000002932 426.82 3435.74 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
47. RPL24 ENSGALG00000015339 418.65 3369.97 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
48. MT-ND4 MT-ND4 416.61 3353.55
49. MT-ND6 MT-ND6 414.57 3337.13
50. GNB2L1 ENSGALG00000000122 411.50 3312.42 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
51. RPS4 RPS4 410.48 3304.21
52. RPL35 ENSGALG00000035677 396.19 3189.18 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
53. RPS7 ENSGALG00000016392 394.14 3172.68 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. RPL36AL ENSGALG00000004952 393.12 3164.47 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
55. RPL6 ENSGALG00000004818 392.10 3156.25 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
56. RPS27A ENSGALG00000036790 391.08 3148.04 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
57. MT-CO1 MT-CO1 383.93 3090.49
58. RPS15A ENSGALG00000006771 372.70 3000.09 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
59. RPL14 ENSGALG00000043379 361.47 2909.69 ribosomal protein L14
60. HMGN2 HMGN2 354.32 2852.14
61. RPL5 ENSGALG00000005922 353.30 2843.93 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
62. ENSGALG00000002696 ENSGALG00000002696 348.19 2802.80
63. TMSB4X ENSGALG00000026383 345.13 2778.16 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
64. RPS13 ENSGALG00000006096 343.09 2761.74 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
65. RPS14 ENSGALG00000004588 340.03 2737.11 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
66. ENSGALG00000028649 ENSGALG00000028649 333.90 2687.77
67. ENO1 ENSGALG00000002377 319.60 2572.66 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
68. RPL36 ENSGALG00000000474 318.58 2564.45 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
69. RPLP2 ENSGALG00000034811 307.35 2474.05 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
70. CIRBP ENSGALG00000030918 302.24 2432.92 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
71. RPS20 ENSGALG00000014432 302.24 2432.92 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
72. TXN ENSGALG00000015704 302.24 2432.92 thioredoxin [Source:NCBI gene;Acc:396437]
73. TCEB3 ENSGALG00000034625 300.20 2416.49 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
74. RPL18A 297.14 2391.86 ribosomal protein L18a
75. RPS25 ENSGALG00000007699 289.99 2334.31 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
76. ANP32B ENSGALG00000037483 287.95 2317.89 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
77. STMN1 ENSGALG00000001475 285.91 2301.47 stathmin 1 [Source:NCBI gene;Acc:396057]
78. EEF1D 281.82 2268.54 eukaryotic translation elongation factor 1 delta, transcript variant X13
79. RPL23 ENSGALG00000001634 275.70 2219.28 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
80. ENSGALG00000028992 ENSGALG00000028992 269.57 2169.94
81. MT-ND3 MT-ND3 266.51 2145.30
82. CRHOA CRHOA 263.44 2120.59
83. NUCKS1 ENSGALG00000000708 246.08 1980.85 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
84. AKAP12 ENSGALG00000036240 239.96 1931.59 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
85. RPL37 ENSGALG00000014833 239.96 1931.59 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
86. MT-ND1 MT-ND1 238.94 1923.38
87. HBG1 HBG1 234.85 1890.45
88. EIF5A2 ENSGALG00000009309 226.68 1824.69 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
89. RPL10A ENSGALG00000002644 223.62 1800.06 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
90. RPL31 ENSGALG00000016775 217.49 1750.71 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
91. HMGN5 ENSGALG00000007131 209.32 1684.95 high mobility group nucleosome binding domain 5, transcript variant X1
92. RPS17 ENSGALG00000002157 209.32 1684.95 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
93. SET ENSGALG00000004701 208.30 1676.74 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
94. HBZ ENSGALG00000023740 207.28 1668.52 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
95. RAN ENSGALG00000002569 206.26 1660.31 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
96. MT-ND2 MT-ND2 205.24 1652.10
97. UBB ENSGALG00000004509 205.24 1652.10 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
98. PKM ENSGALG00000001992 201.16 1619.26 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
99. PRDX1 ENSGALG00000010243 200.13 1610.97 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
100. RPL3 ENSGALG00000012172 200.13 1610.97 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA